RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 BORCS7Q96B45 105 aa11.56□□□□□ -0.56
UBE3D-204ENST00000430071 ANAPC16Q96DE5 110 aa11.56□□□□□ -0.56
UBE3D-204ENST00000430071 TNFRSF18Q9Y5U5 241 aa11.56□□□□□ -0.56
UBE3D-204ENST00000430071 HSPG2P98160 4391 aa11.56□□□□□ -0.56
UBE3D-204ENST00000430071 MGPP08493 103 aa11.55□□□□□ -0.56
UBE3D-204ENST00000430071 DPH3P1Q9H4G8 78 aa11.55□□□□□ -0.56
UBE3D-204ENST00000430071 F5H697 171 aa11.54□□□□□ -0.56
UBE3D-204ENST00000430071 SRIP30626 198 aa11.54□□□□□ -0.56
UBE3D-204ENST00000430071 KRTAP4-5Q9BYR2 181 aa11.54□□□□□ -0.56
UBE3D-204ENST00000430071 GAGE12JA6NER3 117 aa11.54□□□□□ -0.56
UBE3D-204ENST00000430071 SIVA1O15304 175 aa11.54□□□□□ -0.56
UBE3D-204ENST00000430071 GAGE1Q13065 139 aa11.54□□□□□ -0.56
UBE3D-204ENST00000430071 GAGE4Q13068 117 aa11.54□□□□□ -0.56
UBE3D-204ENST00000430071 GAGE5Q13069 117 aa11.54□□□□□ -0.56
UBE3D-204ENST00000430071 RIGQ13278 110 aa11.54□□□□□ -0.56
UBE3D-204ENST00000430071 GAGE13Q4V321 117 aa11.54□□□□□ -0.56
UBE3D-204ENST00000430071 TTC32Q5I0X7 151 aa11.54□□□□□ -0.56
UBE3D-204ENST00000430071 DNAH5Q8TE73 4624 aa11.53□□□□□ -0.56
UBE3D-204ENST00000430071 LINC00694P0DN24 101 aa11.53□□□□□ -0.56
UBE3D-204ENST00000430071 KRTAP10-2P60368 255 aa11.53□□□□□ -0.56
UBE3D-204ENST00000430071 SUMO4Q6EEV6 95 aa11.53□□□□□ -0.56
UBE3D-204ENST00000430071 Q6ZRN7 208 aaPredicted RBP11.53□□□□□ -0.56
UBE3D-204ENST00000430071 NEGR1Q7Z3B1 354 aa11.53□□□□□ -0.56
UBE3D-204ENST00000430071 CLRN3Q8NCR9 226 aa11.53□□□□□ -0.56
UBE3D-204ENST00000430071 TRBV10-1A0A0K0K1A3 114 aa11.52□□□□□ -0.57
UBE3D-204ENST00000430071 C7orf77A4D0Y5 90 aa11.52□□□□□ -0.57
UBE3D-204ENST00000430071 C16orf90A8MZG2 172 aa11.52□□□□□ -0.57
UBE3D-204ENST00000430071 M0QY20 66 aa11.52□□□□□ -0.57
UBE3D-204ENST00000430071 APOC3P02656 99 aa11.52□□□□□ -0.57
UBE3D-204ENST00000430071 MRPL54Q6P161 138 aaKnown RBP11.52□□□□□ -0.57
UBE3D-204ENST00000430071 SMIM15Q7Z3B0 74 aa11.52□□□□□ -0.57
UBE3D-204ENST00000430071 SPATA12Q7Z6I5 190 aa11.52□□□□□ -0.57
UBE3D-204ENST00000430071 CTDSP1Q9GZU7 261 aa11.52□□□□□ -0.57
UBE3D-204ENST00000430071 TMEM191AQ9H0A3 160 aa11.52□□□□□ -0.57
UBE3D-204ENST00000430071 ABCA13Q86UQ4 5058 aa11.52□□□□□ -0.57
UBE3D-204ENST00000430071 A0A1B0GXF2 115 aa11.51□□□□□ -0.57
UBE3D-204ENST00000430071 NEXN-AS1Q8NBZ9 246 aa11.51□□□□□ -0.57
UBE3D-204ENST00000430071 TRAV26-2A0A0B4J265 109 aa11.5□□□□□ -0.57
UBE3D-204ENST00000430071 FUSP35637 526 aaKnown RBP eCLIP11.5□□□□□ -0.57
UBE3D-204ENST00000430071 RHEBQ15382 184 aa11.5□□□□□ -0.57
UBE3D-204ENST00000430071 SH2D6Q7Z4S9 175 aa11.5□□□□□ -0.57
UBE3D-204ENST00000430071 WFDC10BQ8IUB3 73 aa11.5□□□□□ -0.57
UBE3D-204ENST00000430071 GATD1Q8NB37 220 aa11.5□□□□□ -0.57
UBE3D-204ENST00000430071 APOBP04114 4563 aaKnown RBP11.49□□□□□ -0.57
UBE3D-204ENST00000430071 A0A087WWC5 75 aa11.49□□□□□ -0.57
UBE3D-204ENST00000430071 CAMPP49913 170 aa11.49□□□□□ -0.57
UBE3D-204ENST00000430071 RPL36AP83881 106 aaKnown RBP11.49□□□□□ -0.57
UBE3D-204ENST00000430071 NDUFA5Q16718 116 aa11.49□□□□□ -0.57
UBE3D-204ENST00000430071 ATP6V0E2Q8NHE4 81 aa11.49□□□□□ -0.57
UBE3D-204ENST00000430071 RPL36ALQ969Q0 106 aaKnown RBP11.49□□□□□ -0.57
UBE3D-204ENST00000430071 RNF185Q96GF1 192 aa11.49□□□□□ -0.57
UBE3D-204ENST00000430071 TRBV7-3A0A075B6L6 115 aa11.48□□□□□ -0.57
UBE3D-204ENST00000430071 A0A1B0GW15 77 aa11.48□□□□□ -0.57
UBE3D-204ENST00000430071 UBE2D3P61077 147 aa11.48□□□□□ -0.57
UBE3D-204ENST00000430071 UBE2D2P62837 147 aa11.48□□□□□ -0.57
UBE3D-204ENST00000430071 HBBP68871 147 aa11.48□□□□□ -0.57
UBE3D-204ENST00000430071 RASL11AQ6T310 242 aa11.48□□□□□ -0.57
UBE3D-204ENST00000430071 AMN1Q8IY45 258 aa11.48□□□□□ -0.57
UBE3D-204ENST00000430071 IMMP2LQ96T52 175 aa11.48□□□□□ -0.57
UBE3D-204ENST00000430071 RPS10P5Q9NQ39 176 aa11.48□□□□□ -0.57
UBE3D-204ENST00000430071 H7C1H1 209 aa11.47□□□□□ -0.57
UBE3D-204ENST00000430071 RAB4AP20338 218 aa11.47□□□□□ -0.57
UBE3D-204ENST00000430071 ATP5L2Q7Z4Y8 100 aa11.47□□□□□ -0.57
UBE3D-204ENST00000430071 SVBPQ8N300 66 aa11.47□□□□□ -0.57
UBE3D-204ENST00000430071 TMEM242Q9NWH2 141 aa11.47□□□□□ -0.57
UBE3D-204ENST00000430071 GAS8-AS1O95177 125 aa11.46□□□□□ -0.57
UBE3D-204ENST00000430071 TIRAPP58753 221 aa11.46□□□□□ -0.57
UBE3D-204ENST00000430071 GTSF1LQ9H1H1 148 aa11.46□□□□□ -0.57
UBE3D-204ENST00000430071 SNAPINO95295 136 aa11.45□□□□□ -0.58
UBE3D-204ENST00000430071 BTF3P20290 206 aaKnown RBP11.45□□□□□ -0.58
UBE3D-204ENST00000430071 FAM104BQ5XKR9 115 aa11.45□□□□□ -0.58
UBE3D-204ENST00000430071 BTF3L4Q96K17 158 aa11.45□□□□□ -0.58
UBE3D-204ENST00000430071 NIT2Q9NQR4 276 aa11.45□□□□□ -0.58
UBE3D-204ENST00000430071 S100A8P05109 93 aa11.44□□□□□ -0.58
UBE3D-204ENST00000430071 KCNIP4Q6PIL6 250 aa11.44□□□□□ -0.58
UBE3D-204ENST00000430071 RPL39LQ96EH5 51 aaKnown RBP11.44□□□□□ -0.58
UBE3D-204ENST00000430071 DNAJC30Q96LL9 226 aa11.44□□□□□ -0.58
UBE3D-204ENST00000430071 URGCP-MRPS24S4R325 110 aa11.44□□□□□ -0.58
UBE3D-204ENST00000430071 IGHV3-38A0A0C4DH36 116 aa11.43□□□□□ -0.58
UBE3D-204ENST00000430071 SMKR1H3BMG3 65 aa11.43□□□□□ -0.58
UBE3D-204ENST00000430071 MRPL51Q4U2R6 128 aaKnown RBP11.43□□□□□ -0.58
UBE3D-204ENST00000430071 ATRAIDQ6UW56 229 aa11.43□□□□□ -0.58
UBE3D-204ENST00000430071 FRZBQ92765 325 aa11.43□□□□□ -0.58
UBE3D-204ENST00000430071 NCR2O95944 276 aa11.42□□□□□ -0.58
UBE3D-204ENST00000430071 DNAH10OSP0CZ25 163 aa11.42□□□□□ -0.58
UBE3D-204ENST00000430071 MRAP2Q96G30 205 aa11.42□□□□□ -0.58
UBE3D-204ENST00000430071 TRAV9-1A0A075B6T8 112 aa11.41□□□□□ -0.58
UBE3D-204ENST00000430071 S100PP25815 95 aa11.41□□□□□ -0.58
UBE3D-204ENST00000430071 RPS10P46783 165 aaKnown RBP11.41□□□□□ -0.58
UBE3D-204ENST00000430071 LELP1Q5T871 98 aa11.41□□□□□ -0.58
UBE3D-204ENST00000430071 CDK2AP2O75956 126 aa11.41□□□□□ -0.58
UBE3D-204ENST00000430071 TRBV6-5A0A0K0K1A5 114 aa11.4□□□□□ -0.59
UBE3D-204ENST00000430071 OR10J3Q5JRS4 329 aa11.4□□□□□ -0.59
UBE3D-204ENST00000430071 NTM-AS1Q6ZSK4 140 aa11.4□□□□□ -0.59
UBE3D-204ENST00000430071 DAZ4Q86SG3 579 aaKnown RBP11.4□□□□□ -0.59
UBE3D-204ENST00000430071 NRACQ8N912 160 aa11.4□□□□□ -0.59
UBE3D-204ENST00000430071 DAZ3Q9NR90 486 aaKnown RBP11.4□□□□□ -0.59
UBE3D-204ENST00000430071 TMEM136Q6ZRR5 245 aa11.39□□□□□ -0.59
UBE3D-204ENST00000430071 Q8N3U1 123 aa11.39□□□□□ -0.59
UBE3D-204ENST00000430071 DEFB104AQ8WTQ1 72 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms