RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 OR4C5Q8NGB2 326 aa15.82■□□□□ 0.12
VSX1-205ENST00000429762 KIR2DL5BQ8NHK3 375 aa15.82■□□□□ 0.12
VSX1-205ENST00000429762 PPP1R17O96001 155 aa15.81■□□□□ 0.12
VSX1-205ENST00000429762 TMEM70Q9BUB7 260 aa15.81■□□□□ 0.12
VSX1-205ENST00000429762 LAGE3Q14657 143 aa15.8■□□□□ 0.12
VSX1-205ENST00000429762 NBEAL2Q6ZNJ1 2754 aa15.8■□□□□ 0.12
VSX1-205ENST00000429762 SDHAF1A6NFY7 115 aa15.8■□□□□ 0.12
VSX1-205ENST00000429762 BTF3P20290 206 aaKnown RBP15.79■□□□□ 0.12
VSX1-205ENST00000429762 FCER1GP30273 86 aa15.79■□□□□ 0.12
VSX1-205ENST00000429762 C18orf15Q96N68 181 aa15.79■□□□□ 0.12
VSX1-205ENST00000429762 RHODO00212 210 aa15.78■□□□□ 0.12
VSX1-205ENST00000429762 DEFB4AO15263 64 aa15.78■□□□□ 0.12
VSX1-205ENST00000429762 POLR2KP53803 58 aaKnown RBP15.78■□□□□ 0.12
VSX1-205ENST00000429762 LGALS9BQ3B8N2 356 aa15.78■□□□□ 0.12
VSX1-205ENST00000429762 OVOL2Q9BRP0 275 aa15.78■□□□□ 0.12
VSX1-205ENST00000429762 HSPB8Q9UJY1 196 aa15.78■□□□□ 0.12
VSX1-205ENST00000429762 TRBV6-5A0A0K0K1A5 114 aa15.77■□□□□ 0.12
VSX1-205ENST00000429762 PCP4L1A6NKN8 68 aa15.77■□□□□ 0.12
VSX1-205ENST00000429762 NUDT3O95989 172 aa15.77■□□□□ 0.12
VSX1-205ENST00000429762 OR11H2Q8NH07 326 aa15.77■□□□□ 0.12
VSX1-205ENST00000429762 TRGV2A0A075B6R0 118 aa15.76■□□□□ 0.11
VSX1-205ENST00000429762 DNAH3Q8TD57 4116 aa15.76■□□□□ 0.11
VSX1-205ENST00000429762 TRAV4A0A0B4J268 109 aa15.76■□□□□ 0.11
VSX1-205ENST00000429762 SYS1-DBNDD2H3BUS1 97 aa15.76■□□□□ 0.11
VSX1-205ENST00000429762 ATOH7Q8N100 152 aa15.76■□□□□ 0.11
VSX1-205ENST00000429762 H7C1H1 209 aa15.75■□□□□ 0.11
VSX1-205ENST00000429762 SAMD5Q5TGI4 173 aa15.75■□□□□ 0.11
VSX1-205ENST00000429762 NDUFAF3Q9BU61 184 aa15.75■□□□□ 0.11
VSX1-205ENST00000429762 MAP1LC3CQ9BXW4 147 aa15.75■□□□□ 0.11
VSX1-205ENST00000429762 PRB2P02812 416 aaPredicted RBP15.75■□□□□ 0.11
VSX1-205ENST00000429762 VCYO14598 125 aa15.74■□□□□ 0.11
VSX1-205ENST00000429762 DEFB130BP0DP73 79 aa15.74■□□□□ 0.11
VSX1-205ENST00000429762 DEFB130AP0DP74 79 aa15.74■□□□□ 0.11
VSX1-205ENST00000429762 ZFP2Q6ZN57 461 aa15.74■□□□□ 0.11
VSX1-205ENST00000429762 NEXN-AS1Q8NBZ9 246 aa15.74■□□□□ 0.11
VSX1-205ENST00000429762 PMCHL2Q9BQD1 86 aa15.74■□□□□ 0.11
VSX1-205ENST00000429762 EDA2RQ9HAV5 297 aa15.74■□□□□ 0.11
VSX1-205ENST00000429762 RIPPLY3P57055 190 aa15.73■□□□□ 0.11
VSX1-205ENST00000429762 RPL32P62910 135 aaKnown RBP15.73■□□□□ 0.11
VSX1-205ENST00000429762 IGHV4-28A0A0C4DH34 117 aa15.73■□□□□ 0.11
VSX1-205ENST00000429762 SMIM9A6NGZ8 99 aa15.73■□□□□ 0.11
VSX1-205ENST00000429762 ORMDL2Q53FV1 153 aa15.73■□□□□ 0.11
VSX1-205ENST00000429762 RETNQ9HD89 108 aa15.73■□□□□ 0.11
VSX1-205ENST00000429762 TRBV27A0A0K0K1C4 114 aa15.72■□□□□ 0.11
VSX1-205ENST00000429762 IFI27L1Q96BM0 104 aa15.72■□□□□ 0.11
VSX1-205ENST00000429762 TNFRSF18Q9Y5U5 241 aa15.72■□□□□ 0.11
VSX1-205ENST00000429762 RNF183Q96D59 192 aa15.71■□□□□ 0.11
VSX1-205ENST00000429762 KIR2DL4Q99706 377 aa15.71■□□□□ 0.1
VSX1-205ENST00000429762 PRO1933Q9H354 126 aa15.71■□□□□ 0.1
VSX1-205ENST00000429762 TSHBP01222 138 aa15.7■□□□□ 0.1
VSX1-205ENST00000429762 TEX43Q6ZNM6 134 aa15.7■□□□□ 0.1
VSX1-205ENST00000429762 PHLDA1Q8WV24 401 aaPredicted RBP15.7■□□□□ 0.1
VSX1-205ENST00000429762 IGHV3-38A0A0C4DH36 116 aa15.69■□□□□ 0.1
VSX1-205ENST00000429762 FAM222AQ5U5X8 452 aa15.69■□□□□ 0.1
VSX1-205ENST00000429762 S100A12P80511 92 aa15.69■□□□□ 0.1
VSX1-205ENST00000429762 C2orf66Q6UXQ4 117 aa15.69■□□□□ 0.1
VSX1-205ENST00000429762 I3L3M4 83 aa15.68■□□□□ 0.1
VSX1-205ENST00000429762 K7EQD1 137 aa15.68■□□□□ 0.1
VSX1-205ENST00000429762 MAJINQ3KP22 176 aa15.68■□□□□ 0.1
VSX1-205ENST00000429762 SLC25A29Q8N8R3 303 aa15.68■□□□□ 0.1
VSX1-205ENST00000429762 Q8NAQ8 132 aa15.68■□□□□ 0.1
VSX1-205ENST00000429762 ZMAT5Q9UDW3 170 aaKnown RBP15.68■□□□□ 0.1
VSX1-205ENST00000429762 RPL39P62891 51 aaKnown RBP15.67■□□□□ 0.1
VSX1-205ENST00000429762 PET117Q6UWS5 81 aa15.67■□□□□ 0.1
VSX1-205ENST00000429762 ZNF664Q8N3J9 261 aa15.67■□□□□ 0.1
VSX1-205ENST00000429762 TOMM6Q96B49 74 aa15.67■□□□□ 0.1
VSX1-205ENST00000429762 K7EMI3 77 aa15.67■□□□□ 0.1
VSX1-205ENST00000429762 ZNRF2Q8NHG8 242 aa15.67■□□□□ 0.1
VSX1-205ENST00000429762 PAM16Q9Y3D7 125 aa15.67■□□□□ 0.1
VSX1-205ENST00000429762 TRGV4A0A0C4DH28 118 aa15.66■□□□□ 0.1
VSX1-205ENST00000429762 LOC100131303A0A0U1RQF7 123 aa15.66■□□□□ 0.1
VSX1-205ENST00000429762 LINC00612Q8N6U2 182 aa15.66■□□□□ 0.1
VSX1-205ENST00000429762 CELA1Q9UNI1 258 aa15.66■□□□□ 0.1
VSX1-205ENST00000429762 TP53TG1Q9Y2A0 90 aa15.66■□□□□ 0.1
VSX1-205ENST00000429762 A8MZ25 164 aa15.66■□□□□ 0.1
VSX1-205ENST00000429762 SCGB3A1Q96QR1 104 aa15.66■□□□□ 0.1
VSX1-205ENST00000429762 FHL2Q14192 279 aa15.65■□□□□ 0.1
VSX1-205ENST00000429762 LINC01545Q5VT33 79 aa15.65■□□□□ 0.1
VSX1-205ENST00000429762 NOTCH1P46531 2555 aa15.65■□□□□ 0.1
VSX1-205ENST00000429762 C20orf202A1L168 122 aa15.64■□□□□ 0.09
VSX1-205ENST00000429762 GAGE12JA6NER3 117 aa15.64■□□□□ 0.09
VSX1-205ENST00000429762 MIFP14174 115 aa15.64■□□□□ 0.09
VSX1-205ENST00000429762 GAGE1Q13065 139 aa15.64■□□□□ 0.09
VSX1-205ENST00000429762 GAGE4Q13068 117 aa15.64■□□□□ 0.09
VSX1-205ENST00000429762 GAGE5Q13069 117 aa15.64■□□□□ 0.09
VSX1-205ENST00000429762 GAGE13Q4V321 117 aa15.64■□□□□ 0.09
VSX1-205ENST00000429762 VAMP8Q9BV40 100 aa15.64■□□□□ 0.09
VSX1-205ENST00000429762 PRSS1P07477 247 aa15.64■□□□□ 0.09
VSX1-205ENST00000429762 DNAJC30Q96LL9 226 aa15.64■□□□□ 0.09
VSX1-205ENST00000429762 DKK2Q9UBU2 259 aa15.64■□□□□ 0.09
VSX1-205ENST00000429762 CYSLTR1Q9Y271 337 aa15.63■□□□□ 0.09
VSX1-205ENST00000429762 ATP5LO75964 103 aa15.62■□□□□ 0.09
VSX1-205ENST00000429762 RHOHQ15669 191 aa15.62■□□□□ 0.09
VSX1-205ENST00000429762 LYRM9A8MSI8 78 aa15.61■□□□□ 0.09
VSX1-205ENST00000429762 TRBV7-3A0A075B6L6 115 aa15.6■□□□□ 0.09
VSX1-205ENST00000429762 hDV102S1A0JD36 115 aa15.6■□□□□ 0.09
VSX1-205ENST00000429762 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.6■□□□□ 0.09
VSX1-205ENST00000429762 LURAP1LQ8IV03 231 aa15.6■□□□□ 0.09
VSX1-205ENST00000429762 RPL36AP83881 106 aaKnown RBP15.6■□□□□ 0.09
VSX1-205ENST00000429762 RPL36ALQ969Q0 106 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms