RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 CRYBA4P53673 196 aa9.34□□□□□ -0.91
CDH3-202ENST00000429102 FBXL19-AS1Q494R0 122 aa9.34□□□□□ -0.91
CDH3-202ENST00000429102 C11orf44Q8N8P7 122 aa9.34□□□□□ -0.91
CDH3-202ENST00000429102 ITLN2Q8WWU7 325 aaPredicted RBP9.34□□□□□ -0.91
CDH3-202ENST00000429102 CRIP2P52943 208 aaPredicted RBP9.34□□□□□ -0.91
CDH3-202ENST00000429102 SRSF2Q01130 221 aaKnown RBP9.34□□□□□ -0.91
CDH3-202ENST00000429102 PMVKQ15126 192 aa9.34□□□□□ -0.91
CDH3-202ENST00000429102 Q8N1Y9 231 aa9.34□□□□□ -0.91
CDH3-202ENST00000429102 IGHV4-30-2A0A087WSY4 118 aa9.33□□□□□ -0.92
CDH3-202ENST00000429102 Q6ZSV7 163 aa9.33□□□□□ -0.92
CDH3-202ENST00000429102 DAND5Q8N907 189 aa9.33□□□□□ -0.92
CDH3-202ENST00000429102 DAZ1Q9NQZ3 744 aaKnown RBP9.33□□□□□ -0.92
CDH3-202ENST00000429102 TRAV8-3A0A0A6YYJ7 113 aa9.33□□□□□ -0.92
CDH3-202ENST00000429102 A4D1N5 150 aa9.33□□□□□ -0.92
CDH3-202ENST00000429102 J3QQQ9 107 aa9.33□□□□□ -0.92
CDH3-202ENST00000429102 NDUFA4O00483 81 aa9.33□□□□□ -0.92
CDH3-202ENST00000429102 AVPP01185 164 aa9.33□□□□□ -0.92
CDH3-202ENST00000429102 A0A0J9YY99 117 aa9.32□□□□□ -0.92
CDH3-202ENST00000429102 VCYO14598 125 aa9.32□□□□□ -0.92
CDH3-202ENST00000429102 IGHV4-59P01825 116 aa9.32□□□□□ -0.92
CDH3-202ENST00000429102 U3KQE9 123 aa9.32□□□□□ -0.92
CDH3-202ENST00000429102 TRAV12-1A0A0B4J245 112 aa9.32□□□□□ -0.92
CDH3-202ENST00000429102 RNF223E7ERA6 249 aa9.32□□□□□ -0.92
CDH3-202ENST00000429102 CFC1BP0CG36 223 aa9.32□□□□□ -0.92
CDH3-202ENST00000429102 CFC1P0CG37 223 aa9.32□□□□□ -0.92
CDH3-202ENST00000429102 IGLV4-69A0A075B6H9 119 aa9.31□□□□□ -0.92
CDH3-202ENST00000429102 FAM223BA6NKX1 122 aa9.31□□□□□ -0.92
CDH3-202ENST00000429102 NDUFA11Q86Y39 141 aa9.31□□□□□ -0.92
CDH3-202ENST00000429102 FAM223AQ8IWN6 122 aa9.31□□□□□ -0.92
CDH3-202ENST00000429102 VCX2Q9H322 139 aa9.31□□□□□ -0.92
CDH3-202ENST00000429102 B5MCH6 92 aa9.31□□□□□ -0.92
CDH3-202ENST00000429102 NBL1P41271 181 aa9.31□□□□□ -0.92
CDH3-202ENST00000429102 RNF183Q96D59 192 aa9.31□□□□□ -0.92
CDH3-202ENST00000429102 CCL19Q99731 98 aa9.31□□□□□ -0.92
CDH3-202ENST00000429102 ID1P41134 155 aa9.31□□□□□ -0.92
CDH3-202ENST00000429102 XGP55808 180 aa9.31□□□□□ -0.92
CDH3-202ENST00000429102 TAL2Q16559 108 aa9.31□□□□□ -0.92
CDH3-202ENST00000429102 ANKRD29Q8N6D5 301 aa9.31□□□□□ -0.92
CDH3-202ENST00000429102 NTN5Q8WTR8 489 aaPredicted RBP9.31□□□□□ -0.92
CDH3-202ENST00000429102 PRO0461Q9UI25 63 aa9.31□□□□□ -0.92
CDH3-202ENST00000429102 IGKV3OR2-268A0A0C4DH90 116 aa9.3□□□□□ -0.92
CDH3-202ENST00000429102 GATA3P23771 443 aa9.3□□□□□ -0.92
CDH3-202ENST00000429102 MUSTN1Q8IVN3 82 aa9.3□□□□□ -0.92
CDH3-202ENST00000429102 C1QTNF4Q9BXJ3 329 aa9.3□□□□□ -0.92
CDH3-202ENST00000429102 TEX29Q8N6K0 151 aa9.3□□□□□ -0.92
CDH3-202ENST00000429102 TMEM190Q8WZ59 177 aa9.3□□□□□ -0.92
CDH3-202ENST00000429102 DOPEY1Q5JWR5 2465 aa9.3□□□□□ -0.92
CDH3-202ENST00000429102 LINC01546A6NGU7 62 aa9.3□□□□□ -0.92
CDH3-202ENST00000429102 ERG28Q9UKR5 140 aa9.3□□□□□ -0.92
CDH3-202ENST00000429102 NBEAL2Q6ZNJ1 2754 aa9.3□□□□□ -0.92
CDH3-202ENST00000429102 IGHV4-4A0A075B6R2 117 aa9.29□□□□□ -0.92
CDH3-202ENST00000429102 FHL3Q13643 280 aa9.29□□□□□ -0.92
CDH3-202ENST00000429102 LYRM7Q5U5X0 104 aa9.29□□□□□ -0.92
CDH3-202ENST00000429102 SNCGO76070 127 aa9.29□□□□□ -0.92
CDH3-202ENST00000429102 CD28P10747 220 aa9.29□□□□□ -0.92
CDH3-202ENST00000429102 MRPL53Q96EL3 112 aaKnown RBP9.29□□□□□ -0.92
CDH3-202ENST00000429102 HIVEP2P31629 2446 aa9.29□□□□□ -0.92
CDH3-202ENST00000429102 TTC32Q5I0X7 151 aa9.29□□□□□ -0.92
CDH3-202ENST00000429102 CFAP126Q5VTH2 177 aa9.29□□□□□ -0.92
CDH3-202ENST00000429102 PIMREGQ9BSJ6 248 aa9.29□□□□□ -0.92
CDH3-202ENST00000429102 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.28□□□□□ -0.92
CDH3-202ENST00000429102 IGKV2-29A2NJV5 120 aaPredicted RBP9.28□□□□□ -0.92
CDH3-202ENST00000429102 IGIPA6NJ69 53 aa9.28□□□□□ -0.92
CDH3-202ENST00000429102 SOCS3O14543 225 aa9.28□□□□□ -0.92
CDH3-202ENST00000429102 PRO1854Q9UHT4 67 aa9.28□□□□□ -0.92
CDH3-202ENST00000429102 SLC25A20O43772 301 aa9.28□□□□□ -0.92
CDH3-202ENST00000429102 LINC00315P59091 139 aa9.28□□□□□ -0.92
CDH3-202ENST00000429102 ELANEP08246 267 aa9.27□□□□□ -0.92
CDH3-202ENST00000429102 SNRPD3P62318 126 aaKnown RBP9.27□□□□□ -0.93
CDH3-202ENST00000429102 DGAT2L7PQ6IED9 249 aa9.27□□□□□ -0.93
CDH3-202ENST00000429102 CARD19Q96LW7 228 aa9.27□□□□□ -0.93
CDH3-202ENST00000429102 IGSF10Q6WRI0 2623 aa9.27□□□□□ -0.93
CDH3-202ENST00000429102 COX6B1P14854 86 aa9.26□□□□□ -0.93
CDH3-202ENST00000429102 POLR2KP53803 58 aaKnown RBP9.26□□□□□ -0.93
CDH3-202ENST00000429102 DEFB131AP59861 70 aa9.26□□□□□ -0.93
CDH3-202ENST00000429102 C18orf65Q6ZTR6 163 aa9.26□□□□□ -0.93
CDH3-202ENST00000429102 Q6ZUT4 128 aa9.26□□□□□ -0.93
CDH3-202ENST00000429102 PPDPFLQ8WWR9 84 aa9.26□□□□□ -0.93
CDH3-202ENST00000429102 IGHV3-53P01767 116 aa9.26□□□□□ -0.93
CDH3-202ENST00000429102 DEFB112Q30KQ8 113 aa9.26□□□□□ -0.93
CDH3-202ENST00000429102 ZFAND6Q6FIF0 208 aa9.26□□□□□ -0.93
CDH3-202ENST00000429102 IGHV3-30P01768 117 aa9.26□□□□□ -0.93
CDH3-202ENST00000429102 IGHV3-30-5P0DP03 117 aa9.26□□□□□ -0.93
CDH3-202ENST00000429102 C10orf126Q8N4M7 172 aa9.26□□□□□ -0.93
CDH3-202ENST00000429102 USMG5Q96IX5 58 aa9.25□□□□□ -0.93
CDH3-202ENST00000429102 LENEPQ9Y5L5 61 aa9.25□□□□□ -0.93
CDH3-202ENST00000429102 KIF25-AS1Q9Y6Z4 181 aa9.25□□□□□ -0.93
CDH3-202ENST00000429102 IGHG2P01859 326 aa9.25□□□□□ -0.93
CDH3-202ENST00000429102 UBE2D1P51668 147 aa9.25□□□□□ -0.93
CDH3-202ENST00000429102 GAGE2BQ13066 116 aa9.25□□□□□ -0.93
CDH3-202ENST00000429102 GAGE2EQ4V326 116 aa9.25□□□□□ -0.93
CDH3-202ENST00000429102 GAGE2DQ9UEU5 116 aa9.25□□□□□ -0.93
CDH3-202ENST00000429102 APRG1Q8IVJ8 170 aa9.25□□□□□ -0.93
CDH3-202ENST00000429102 IGHV1OR15-1A0A075B7D0 117 aa9.24□□□□□ -0.93
CDH3-202ENST00000429102 TEX49A0A1B0GTD5 131 aa9.24□□□□□ -0.93
CDH3-202ENST00000429102 RS1O15537 224 aa9.24□□□□□ -0.93
CDH3-202ENST00000429102 PPP1R17O96001 155 aa9.24□□□□□ -0.93
CDH3-202ENST00000429102 DCANP1Q8TF63 244 aa9.24□□□□□ -0.93
CDH3-202ENST00000429102 CDIP1Q9H305 208 aa9.24□□□□□ -0.93
CDH3-202ENST00000429102 M0QY20 66 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms