RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 PMVKQ15126 192 aa10.07□□□□□ -0.8
THBS3-202ENST00000428962 DEFB114Q30KQ6 69 aa10.07□□□□□ -0.8
THBS3-202ENST00000428962 AMMECR1LQ6DCA0 310 aa10.07□□□□□ -0.8
THBS3-202ENST00000428962 EDA2RQ9HAV5 297 aa10.07□□□□□ -0.8
THBS3-202ENST00000428962 TRAV25A0A0B4J276 109 aa10.07□□□□□ -0.8
THBS3-202ENST00000428962 E9PLD3 99 aa10.07□□□□□ -0.8
THBS3-202ENST00000428962 RBMY1A1P0DJD3 496 aaKnown RBP10.07□□□□□ -0.8
THBS3-202ENST00000428962 RBMY1CP0DJD4 496 aa10.07□□□□□ -0.8
THBS3-202ENST00000428962 RBMY1FQ15415 496 aaKnown RBP10.07□□□□□ -0.8
THBS3-202ENST00000428962 MYMXA0A1B0GTQ4 84 aa10.06□□□□□ -0.8
THBS3-202ENST00000428962 HERVK_113P61574 105 aa10.06□□□□□ -0.8
THBS3-202ENST00000428962 MORN3Q6PF18 240 aaPredicted RBP10.06□□□□□ -0.8
THBS3-202ENST00000428962 PTH2Q96A98 100 aa10.06□□□□□ -0.8
THBS3-202ENST00000428962 LINC00467Q9BRT7 94 aa10.06□□□□□ -0.8
THBS3-202ENST00000428962 RBMY1BA6NDE4 496 aaKnown RBP10.05□□□□□ -0.8
THBS3-202ENST00000428962 RBMY1EA6NEQ0 496 aaKnown RBP10.05□□□□□ -0.8
THBS3-202ENST00000428962 A8MWV9 139 aa10.05□□□□□ -0.8
THBS3-202ENST00000428962 I3L3M4 83 aa10.05□□□□□ -0.8
THBS3-202ENST00000428962 M0R2P5 195 aa10.05□□□□□ -0.8
THBS3-202ENST00000428962 INSP01308 110 aa10.05□□□□□ -0.8
THBS3-202ENST00000428962 RBMY1DP0C7P1 496 aaKnown RBP10.05□□□□□ -0.8
THBS3-202ENST00000428962 SMIM13P0DJ93 91 aa10.05□□□□□ -0.8
THBS3-202ENST00000428962 SCGB2A2Q13296 93 aa10.05□□□□□ -0.8
THBS3-202ENST00000428962 GTF2H5Q6ZYL4 71 aa10.05□□□□□ -0.8
THBS3-202ENST00000428962 CEND1Q8N111 149 aa10.05□□□□□ -0.8
THBS3-202ENST00000428962 MAPKAPK5-AS1Q8N8E1 139 aa10.05□□□□□ -0.8
THBS3-202ENST00000428962 CLUHP3Q96NS8 147 aa10.05□□□□□ -0.8
THBS3-202ENST00000428962 TM2D2Q9BX73 214 aa10.05□□□□□ -0.8
THBS3-202ENST00000428962 HIVEP1P15822 2718 aa10.05□□□□□ -0.8
THBS3-202ENST00000428962 CD300EQ496F6 205 aaPredicted RBP10.05□□□□□ -0.8
THBS3-202ENST00000428962 ZANQ9Y493 2812 aa10.04□□□□□ -0.8
THBS3-202ENST00000428962 TSHBP01222 138 aa10.04□□□□□ -0.8
THBS3-202ENST00000428962 HTN1P15515 57 aa10.04□□□□□ -0.8
THBS3-202ENST00000428962 RPL39P62891 51 aaKnown RBP10.04□□□□□ -0.8
THBS3-202ENST00000428962 FHL3Q13643 280 aa10.04□□□□□ -0.8
THBS3-202ENST00000428962 PRADC1Q9BSG0 188 aa10.04□□□□□ -0.8
THBS3-202ENST00000428962 CST9LQ9H4G1 147 aa10.04□□□□□ -0.8
THBS3-202ENST00000428962 AGRNO00468 2067 aa10.04□□□□□ -0.8
THBS3-202ENST00000428962 GAGE10A6NGK3 116 aa10.03□□□□□ -0.8
THBS3-202ENST00000428962 H3BUT2 72 aa10.03□□□□□ -0.8
THBS3-202ENST00000428962 FXYD2P54710 66 aa10.03□□□□□ -0.8
THBS3-202ENST00000428962 IGLV4-69A0A075B6H9 119 aa10.03□□□□□ -0.8
THBS3-202ENST00000428962 HIST1H4GQ99525 98 aa10.03□□□□□ -0.8
THBS3-202ENST00000428962 ESM1Q9NQ30 184 aa10.03□□□□□ -0.8
THBS3-202ENST00000428962 TEP1Q99973 2627 aaKnown RBP10.02□□□□□ -0.8
THBS3-202ENST00000428962 C11orf86A6NJI1 115 aa10.02□□□□□ -0.81
THBS3-202ENST00000428962 CCL24O00175 119 aa10.02□□□□□ -0.81
THBS3-202ENST00000428962 RHODO00212 210 aa10.02□□□□□ -0.81
THBS3-202ENST00000428962 RAB37Q96AX2 223 aa10.02□□□□□ -0.81
THBS3-202ENST00000428962 LINC01587Q99440 93 aa10.02□□□□□ -0.81
THBS3-202ENST00000428962 SPXQ9BT56 116 aa10.02□□□□□ -0.81
THBS3-202ENST00000428962 ITPR3Q14573 2671 aa10.02□□□□□ -0.81
THBS3-202ENST00000428962 RNF151Q2KHN1 245 aa10.01□□□□□ -0.81
THBS3-202ENST00000428962 C20orf203Q8NBC4 194 aa10.01□□□□□ -0.81
THBS3-202ENST00000428962 VPS25Q9BRG1 176 aa10.01□□□□□ -0.81
THBS3-202ENST00000428962 YAE1D1Q9NRH1 226 aa10.01□□□□□ -0.81
THBS3-202ENST00000428962 TSSC4Q9Y5U2 329 aaPredicted RBP10.01□□□□□ -0.81
THBS3-202ENST00000428962 A0A1W2PPM0 123 aa10□□□□□ -0.81
THBS3-202ENST00000428962 A0A1W2PRX2 142 aa10□□□□□ -0.81
THBS3-202ENST00000428962 ZNF815PA8K554 130 aa10□□□□□ -0.81
THBS3-202ENST00000428962 K7EP34 96 aa10□□□□□ -0.81
THBS3-202ENST00000428962 K7ERU9 68 aa10□□□□□ -0.81
THBS3-202ENST00000428962 RNASE1P07998 156 aaKnown RBP10□□□□□ -0.81
THBS3-202ENST00000428962 OCIAD2Q56VL3 154 aa10□□□□□ -0.81
THBS3-202ENST00000428962 C16orf95Q9H693 158 aa10□□□□□ -0.81
THBS3-202ENST00000428962 TNFRSF18Q9Y5U5 241 aa10□□□□□ -0.81
THBS3-202ENST00000428962 CD28P10747 220 aa10□□□□□ -0.81
THBS3-202ENST00000428962 FABP2P12104 132 aa10□□□□□ -0.81
THBS3-202ENST00000428962 KRTAP1-1Q07627 177 aa10□□□□□ -0.81
THBS3-202ENST00000428962 UFSP1Q6NVU6 142 aa10□□□□□ -0.81
THBS3-202ENST00000428962 STHQ8IWL8 128 aa10□□□□□ -0.81
THBS3-202ENST00000428962 DEFB104AQ8WTQ1 72 aa10□□□□□ -0.81
THBS3-202ENST00000428962 NHP2Q9NX24 153 aaKnown RBP10□□□□□ -0.81
THBS3-202ENST00000428962 TRBV7-3A0A075B6L6 115 aa9.99□□□□□ -0.81
THBS3-202ENST00000428962 CMC4P56277 68 aaPredicted RBP9.99□□□□□ -0.81
THBS3-202ENST00000428962 ODF3L2Q3SX64 289 aa9.99□□□□□ -0.81
THBS3-202ENST00000428962 OR5A1Q8NGJ0 315 aa9.99□□□□□ -0.81
THBS3-202ENST00000428962 MXRA5Q9NR99 2828 aa9.99□□□□□ -0.81
THBS3-202ENST00000428962 CIDEAO60543 219 aa9.98□□□□□ -0.81
THBS3-202ENST00000428962 P0DMU3 169 aa9.98□□□□□ -0.81
THBS3-202ENST00000428962 FAM231AP0DMU4 169 aa9.98□□□□□ -0.81
THBS3-202ENST00000428962 FAM231CP0DMU5 169 aa9.98□□□□□ -0.81
THBS3-202ENST00000428962 SAMD5Q5TGI4 173 aa9.98□□□□□ -0.81
THBS3-202ENST00000428962 SCGB1D4Q6XE38 83 aa9.98□□□□□ -0.81
THBS3-202ENST00000428962 NFE4Q86UQ8 179 aa9.98□□□□□ -0.81
THBS3-202ENST00000428962 C11orf72Q8NBR9 251 aa9.98□□□□□ -0.81
THBS3-202ENST00000428962 IGHV3-73A0A0B4J1V6 119 aa9.98□□□□□ -0.81
THBS3-202ENST00000428962 TMEM170BQ5T4T1 132 aa9.98□□□□□ -0.81
THBS3-202ENST00000428962 CFAP126Q5VTH2 177 aa9.98□□□□□ -0.81
THBS3-202ENST00000428962 C11orf44Q8N8P7 122 aa9.98□□□□□ -0.81
THBS3-202ENST00000428962 CITED2Q99967 270 aaPredicted RBP9.98□□□□□ -0.81
THBS3-202ENST00000428962 EMP1P54849 157 aa9.97□□□□□ -0.81
THBS3-202ENST00000428962 BEAN1Q3B7T3 259 aa9.97□□□□□ -0.81
THBS3-202ENST00000428962 PHLDA1Q8WV24 401 aaPredicted RBP9.97□□□□□ -0.81
THBS3-202ENST00000428962 DNAJC30Q96LL9 226 aa9.97□□□□□ -0.81
THBS3-202ENST00000428962 PYGO1Q9Y3Y4 419 aa9.97□□□□□ -0.81
THBS3-202ENST00000428962 SPCS1Q9Y6A9 102 aa9.97□□□□□ -0.81
THBS3-202ENST00000428962 TMEM238LA0A1B0GVL6 79 aa9.96□□□□□ -0.81
THBS3-202ENST00000428962 GAGE12BA1L429 117 aa9.96□□□□□ -0.81
THBS3-202ENST00000428962 A6NJY4 79 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms