RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 PMCHL1Q16048 86 aa6.28□□□□□ -1.4
SMC6-204ENST00000428868 RNASEKQ6P5S7 137 aaKnown RBP6.28□□□□□ -1.4
SMC6-204ENST00000428868 NIT1Q86X76 327 aa6.28□□□□□ -1.4
SMC6-204ENST00000428868 DYNC2H1Q8NCM8 4307 aaKnown RBP6.28□□□□□ -1.4
SMC6-204ENST00000428868 TRGV2A0A075B6R0 118 aa6.27□□□□□ -1.41
SMC6-204ENST00000428868 A0A0J9YWU9 116 aa6.27□□□□□ -1.41
SMC6-204ENST00000428868 LOC100131303A0A0U1RQF7 123 aa6.27□□□□□ -1.41
SMC6-204ENST00000428868 LYRM9A8MSI8 78 aa6.27□□□□□ -1.41
SMC6-204ENST00000428868 RHODO00212 210 aa6.27□□□□□ -1.41
SMC6-204ENST00000428868 PPBPP02775 128 aa6.27□□□□□ -1.41
SMC6-204ENST00000428868 FHL2Q14192 279 aa6.27□□□□□ -1.41
SMC6-204ENST00000428868 ZFP2Q6ZN57 461 aa6.27□□□□□ -1.41
SMC6-204ENST00000428868 FAM19A2Q8N3H0 131 aa6.27□□□□□ -1.41
SMC6-204ENST00000428868 NEXN-AS1Q8NBZ9 246 aa6.27□□□□□ -1.41
SMC6-204ENST00000428868 NDUFAF3Q9BU61 184 aa6.27□□□□□ -1.41
SMC6-204ENST00000428868 A0A096LNJ9 63 aa6.26□□□□□ -1.41
SMC6-204ENST00000428868 ESDP10768 282 aa6.26□□□□□ -1.41
SMC6-204ENST00000428868 PMCHP20382 165 aa6.26□□□□□ -1.41
SMC6-204ENST00000428868 SLC25A29Q8N8R3 303 aa6.26□□□□□ -1.41
SMC6-204ENST00000428868 SPATA25Q9BR10 227 aa6.26□□□□□ -1.41
SMC6-204ENST00000428868 SMIM2Q9BVW6 85 aa6.26□□□□□ -1.41
SMC6-204ENST00000428868 MAP1LC3AQ9H492 121 aa6.26□□□□□ -1.41
SMC6-204ENST00000428868 EDA2RQ9HAV5 297 aa6.26□□□□□ -1.41
SMC6-204ENST00000428868 DNAH7Q8WXX0 4024 aa6.26□□□□□ -1.41
SMC6-204ENST00000428868 SDHAF1A6NFY7 115 aa6.25□□□□□ -1.41
SMC6-204ENST00000428868 PRSS47A8MTI9 375 aa6.25□□□□□ -1.41
SMC6-204ENST00000428868 K7EQD1 137 aa6.25□□□□□ -1.41
SMC6-204ENST00000428868 TCAPO15273 167 aa6.25□□□□□ -1.41
SMC6-204ENST00000428868 POLR2KP53803 58 aaKnown RBP6.25□□□□□ -1.41
SMC6-204ENST00000428868 DAD1P61803 113 aa6.25□□□□□ -1.41
SMC6-204ENST00000428868 SUMO2P61956 95 aaKnown RBP6.25□□□□□ -1.41
SMC6-204ENST00000428868 C12orf74Q32Q52 190 aa6.25□□□□□ -1.41
SMC6-204ENST00000428868 LINC00173Q6ZV60 143 aa6.25□□□□□ -1.41
SMC6-204ENST00000428868 Q8N8P6 123 aa6.25□□□□□ -1.41
SMC6-204ENST00000428868 PRSS3P2Q8NHM4 247 aa6.25□□□□□ -1.41
SMC6-204ENST00000428868 TMEM70Q9BUB7 260 aa6.25□□□□□ -1.41
SMC6-204ENST00000428868 C11orf68Q9H3H3 251 aaKnown RBP6.25□□□□□ -1.41
SMC6-204ENST00000428868 NIT2Q9NQR4 276 aa6.25□□□□□ -1.41
SMC6-204ENST00000428868 LAMTOR2Q9Y2Q5 125 aa6.25□□□□□ -1.41
SMC6-204ENST00000428868 TRGV4A0A0C4DH28 118 aa6.24□□□□□ -1.41
SMC6-204ENST00000428868 IGHV1-24A0A0C4DH33 117 aa6.24□□□□□ -1.41
SMC6-204ENST00000428868 IGHV3-38A0A0C4DH36 116 aa6.24□□□□□ -1.41
SMC6-204ENST00000428868 TRBV6-5A0A0K0K1A5 114 aa6.24□□□□□ -1.41
SMC6-204ENST00000428868 LINC00614P0C842 121 aa6.24□□□□□ -1.41
SMC6-204ENST00000428868 SPART-AS1P0CW21 52 aa6.24□□□□□ -1.41
SMC6-204ENST00000428868 FABP4P15090 132 aa6.24□□□□□ -1.41
SMC6-204ENST00000428868 FA2HQ7L5A8 372 aa6.24□□□□□ -1.41
SMC6-204ENST00000428868 C18orf15Q96N68 181 aa6.24□□□□□ -1.41
SMC6-204ENST00000428868 HIST1H2BLQ99880 126 aa6.24□□□□□ -1.41
SMC6-204ENST00000428868 B9D2Q9BPU9 175 aa6.24□□□□□ -1.41
SMC6-204ENST00000428868 ST20Q9HBF5 79 aa6.24□□□□□ -1.41
SMC6-204ENST00000428868 GAGE12JA6NER3 117 aa6.23□□□□□ -1.41
SMC6-204ENST00000428868 LINC01546A6NGU7 62 aa6.23□□□□□ -1.41
SMC6-204ENST00000428868 TSHBP01222 138 aa6.23□□□□□ -1.41
SMC6-204ENST00000428868 HTN3P15516 51 aa6.23□□□□□ -1.41
SMC6-204ENST00000428868 AMTP48728 403 aa6.23□□□□□ -1.41
SMC6-204ENST00000428868 NANOS2P60321 138 aaKnown RBP6.23□□□□□ -1.41
SMC6-204ENST00000428868 GAGE1Q13065 139 aa6.23□□□□□ -1.41
SMC6-204ENST00000428868 GAGE4Q13068 117 aa6.23□□□□□ -1.41
SMC6-204ENST00000428868 GAGE5Q13069 117 aa6.23□□□□□ -1.41
SMC6-204ENST00000428868 GAGE13Q4V321 117 aa6.23□□□□□ -1.41
SMC6-204ENST00000428868 Q6ZTC4 211 aa6.23□□□□□ -1.41
SMC6-204ENST00000428868 ZNRF2Q8NHG8 242 aa6.23□□□□□ -1.41
SMC6-204ENST00000428868 PHLDA1Q8WV24 401 aaPredicted RBP6.23□□□□□ -1.41
SMC6-204ENST00000428868 CHCHD1Q96BP2 118 aaKnown RBP6.23□□□□□ -1.41
SMC6-204ENST00000428868 C20orf78Q9BR46 151 aa6.23□□□□□ -1.41
SMC6-204ENST00000428868 A0A0J9YY99 117 aa6.22□□□□□ -1.41
SMC6-204ENST00000428868 H7C1H1 209 aa6.22□□□□□ -1.41
SMC6-204ENST00000428868 HSBP1O75506 76 aa6.22□□□□□ -1.41
SMC6-204ENST00000428868 LINC00694P0DN24 101 aa6.22□□□□□ -1.41
SMC6-204ENST00000428868 CRYBA4P53673 196 aa6.22□□□□□ -1.41
SMC6-204ENST00000428868 RPL32P62910 135 aaKnown RBP6.22□□□□□ -1.41
SMC6-204ENST00000428868 VSIG2Q96IQ7 327 aa6.22□□□□□ -1.41
SMC6-204ENST00000428868 NXT2Q9NPJ8 142 aaKnown RBP6.22□□□□□ -1.41
SMC6-204ENST00000428868 AP5S1Q9NUS5 200 aa6.22□□□□□ -1.41
SMC6-204ENST00000428868 TRBV27A0A0K0K1C4 114 aa6.21□□□□□ -1.42
SMC6-204ENST00000428868 TRBV6-4A0A1B0GX49 114 aa6.21□□□□□ -1.42
SMC6-204ENST00000428868 F5H768 121 aa6.21□□□□□ -1.42
SMC6-204ENST00000428868 ATP5G1P05496 136 aa6.21□□□□□ -1.42
SMC6-204ENST00000428868 S100A2P29034 98 aa6.21□□□□□ -1.42
SMC6-204ENST00000428868 UBE2D3P61077 147 aa6.21□□□□□ -1.42
SMC6-204ENST00000428868 UBE2D2P62837 147 aa6.21□□□□□ -1.42
SMC6-204ENST00000428868 HHLA3Q9XRX5 114 aa6.21□□□□□ -1.42
SMC6-204ENST00000428868 TNFRSF18Q9Y5U5 241 aa6.21□□□□□ -1.42
SMC6-204ENST00000428868 TRAV26-1A0A087WT03 109 aa6.2□□□□□ -1.42
SMC6-204ENST00000428868 A0A096LPF7 62 aa6.2□□□□□ -1.42
SMC6-204ENST00000428868 TRBV10-1A0A0K0K1A3 114 aa6.2□□□□□ -1.42
SMC6-204ENST00000428868 VCYO14598 125 aa6.2□□□□□ -1.42
SMC6-204ENST00000428868 PPP1R17O96001 155 aa6.2□□□□□ -1.42
SMC6-204ENST00000428868 GYPEP15421 78 aa6.2□□□□□ -1.42
SMC6-204ENST00000428868 RPL39P62891 51 aaKnown RBP6.2□□□□□ -1.42
SMC6-204ENST00000428868 LAGE3Q14657 143 aa6.2□□□□□ -1.42
SMC6-204ENST00000428868 RHOHQ15669 191 aa6.2□□□□□ -1.42
SMC6-204ENST00000428868 SPATA12Q7Z6I5 190 aa6.2□□□□□ -1.42
SMC6-204ENST00000428868 OR10D4PQ8NGN7 298 aa6.2□□□□□ -1.42
SMC6-204ENST00000428868 TMEM18Q96B42 140 aa6.2□□□□□ -1.42
SMC6-204ENST00000428868 DNAJC30Q96LL9 226 aa6.2□□□□□ -1.42
SMC6-204ENST00000428868 ZMAT4Q9H898 229 aa6.2□□□□□ -1.42
SMC6-204ENST00000428868 CSMD3Q7Z407 3707 aa6.2□□□□□ -1.42
SMC6-204ENST00000428868 PLECQ15149 4684 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms