RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 RPL39LQ96EH5 51 aaKnown RBP5.56□□□□□ -1.52
HMGA1P4-201ENST00000428643 KRTAP9-2Q9BYQ4 174 aa5.56□□□□□ -1.52
HMGA1P4-201ENST00000428643 MUC4Q99102 2169 aa5.56□□□□□ -1.52
HMGA1P4-201ENST00000428643 TRBV10-1A0A0K0K1A3 114 aa5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 LOC100131303A0A0U1RQF7 123 aa5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 GAGE12JA6NER3 117 aa5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 GAS8-AS1O95177 125 aa5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 PPP1R17O96001 155 aa5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 NPYP01303 97 aa5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 TRGC2P03986 189 aa5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 RPL36AP83881 106 aaKnown RBP5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 GAGE1Q13065 139 aa5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 GAGE4Q13068 117 aa5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 GAGE5Q13069 117 aa5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 GAGE13Q4V321 117 aa5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 RPL36ALQ969Q0 106 aaKnown RBP5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 VSIG2Q96IQ7 327 aa5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 PRELID3AQ96N28 172 aa5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 TNFRSF18Q9Y5U5 241 aa5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 COL7A1Q02388 2944 aa5.55□□□□□ -1.52
HMGA1P4-201ENST00000428643 NUPR2A6NF83 97 aa5.54□□□□□ -1.52
HMGA1P4-201ENST00000428643 TNFRSF6BO95407 300 aa5.54□□□□□ -1.52
HMGA1P4-201ENST00000428643 NUDT3O95989 172 aa5.54□□□□□ -1.52
HMGA1P4-201ENST00000428643 SRIP30626 198 aa5.54□□□□□ -1.52
HMGA1P4-201ENST00000428643 ZFAND6Q6FIF0 208 aa5.54□□□□□ -1.52
HMGA1P4-201ENST00000428643 NRACQ8N912 160 aa5.54□□□□□ -1.52
HMGA1P4-201ENST00000428643 NEXN-AS1Q8NBZ9 246 aa5.54□□□□□ -1.52
HMGA1P4-201ENST00000428643 ZNRF2Q8NHG8 242 aa5.54□□□□□ -1.52
HMGA1P4-201ENST00000428643 ST20Q9HBF5 79 aa5.54□□□□□ -1.52
HMGA1P4-201ENST00000428643 NIT2Q9NQR4 276 aa5.54□□□□□ -1.52
HMGA1P4-201ENST00000428643 Q9UF83 564 aa5.54□□□□□ -1.52
HMGA1P4-201ENST00000428643 LAMTOR2Q9Y2Q5 125 aa5.54□□□□□ -1.52
HMGA1P4-201ENST00000428643 ICOSQ9Y6W8 199 aa5.54□□□□□ -1.52
HMGA1P4-201ENST00000428643 DNAH9Q9NYC9 4486 aa5.54□□□□□ -1.52
HMGA1P4-201ENST00000428643 TRBV7-3A0A075B6L6 115 aa5.53□□□□□ -1.52
HMGA1P4-201ENST00000428643 A0A096LPF7 62 aa5.53□□□□□ -1.52
HMGA1P4-201ENST00000428643 IGLL5B9A064 214 aa5.53□□□□□ -1.52
HMGA1P4-201ENST00000428643 SUMO2P61956 95 aaKnown RBP5.53□□□□□ -1.52
HMGA1P4-201ENST00000428643 CEMP1Q6PRD7 247 aaPredicted RBP5.53□□□□□ -1.52
HMGA1P4-201ENST00000428643 NEGR1Q7Z3B1 354 aa5.53□□□□□ -1.52
HMGA1P4-201ENST00000428643 DNAJC30Q96LL9 226 aa5.53□□□□□ -1.52
HMGA1P4-201ENST00000428643 WWC2-AS2Q96NR7 200 aa5.53□□□□□ -1.52
HMGA1P4-201ENST00000428643 ALKBH7Q9BT30 221 aaPredicted RBP5.53□□□□□ -1.52
HMGA1P4-201ENST00000428643 MAP1LC3AQ9H492 121 aa5.53□□□□□ -1.52
HMGA1P4-201ENST00000428643 KLK5Q9Y337 293 aaPredicted RBP5.53□□□□□ -1.52
HMGA1P4-201ENST00000428643 RYR3Q15413 4870 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 IGHV3-38A0A0C4DH36 116 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 TRBV6-5A0A0K0K1A5 114 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 LOC389332A0A1B0GUA5 103 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 SDHAF1A6NFY7 115 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 C1orf196B1AJZ1 125 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 H3BNG1 76 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 PHOX2AO14813 284 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 PMCHP20382 165 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 UBE2D3P61077 147 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 UBE2D2P62837 147 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 MRPL23Q16540 153 aaKnown RBP5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 IQCJQ1A5X6 159 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 C15orf53Q8NAA6 179 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 MUC7Q8TAX7 377 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 C20orf78Q9BR46 151 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 TMEM70Q9BUB7 260 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 SMIM2Q9BVW6 85 aa5.52□□□□□ -1.53
HMGA1P4-201ENST00000428643 LINC00694P0DN24 101 aa5.51□□□□□ -1.53
HMGA1P4-201ENST00000428643 FCER1GP30273 86 aa5.51□□□□□ -1.53
HMGA1P4-201ENST00000428643 SH2D6Q7Z4S9 175 aa5.51□□□□□ -1.53
HMGA1P4-201ENST00000428643 DAZ4Q86SG3 579 aaKnown RBP5.51□□□□□ -1.53
HMGA1P4-201ENST00000428643 ATP6V0E2Q8NHE4 81 aa5.51□□□□□ -1.53
HMGA1P4-201ENST00000428643 DEFB104AQ8WTQ1 72 aa5.51□□□□□ -1.53
HMGA1P4-201ENST00000428643 DAZ3Q9NR90 486 aaKnown RBP5.51□□□□□ -1.53
HMGA1P4-201ENST00000428643 TRBV27A0A0K0K1C4 114 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 I3L3M4 83 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 VCYO14598 125 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 HIST1H2BKO60814 126 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 HIST1H2BJP06899 126 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 HIST1H2BOP23527 126 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 HIST1H2BBP33778 126 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 HIST1H2BDP58876 126 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 RAB5BP61020 215 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 HIST1H2BCP62807 126 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 COTL1Q14019 142 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 HIST2H2BEQ16778 126 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 RNASEKQ6P5S7 137 aaKnown RBP5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 FA2HQ7L5A8 372 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 BAGE3Q86Y29 109 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 PRSS3P2Q8NHM4 247 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 C18orf32Q8TCD1 76 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 HIST1H2BHQ93079 126 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 KIR2DL4Q99706 377 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 HIST1H2BNQ99877 126 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 HIST1H2BMQ99879 126 aa5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 NXT2Q9NPJ8 142 aaKnown RBP5.5□□□□□ -1.53
HMGA1P4-201ENST00000428643 TSHBP01222 138 aa5.49□□□□□ -1.53
HMGA1P4-201ENST00000428643 IFI27P40305 119 aaPredicted RBP5.49□□□□□ -1.53
HMGA1P4-201ENST00000428643 AMTP48728 403 aa5.49□□□□□ -1.53
HMGA1P4-201ENST00000428643 RPL32P62910 135 aaKnown RBP5.49□□□□□ -1.53
HMGA1P4-201ENST00000428643 Q8N8P6 123 aa5.49□□□□□ -1.53
HMGA1P4-201ENST00000428643 GTSF1LQ9H1H1 148 aa5.49□□□□□ -1.53
HMGA1P4-201ENST00000428643 TCAPO15273 167 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms