RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 PAGE4O60829 102 aa10.67□□□□□ -0.7
VARS-216ENST00000428445 ANGP03950 147 aaKnown RBP10.67□□□□□ -0.7
VARS-216ENST00000428445 OR5AL1P0C617 328 aa10.67□□□□□ -0.7
VARS-216ENST00000428445 SSTP61278 116 aa10.67□□□□□ -0.7
VARS-216ENST00000428445 RPL19P84098 196 aaKnown RBP10.67□□□□□ -0.7
VARS-216ENST00000428445 CLPSL2Q6UWE3 100 aa10.67□□□□□ -0.7
VARS-216ENST00000428445 NEXN-AS1Q8NBZ9 246 aa10.67□□□□□ -0.7
VARS-216ENST00000428445 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.67□□□□□ -0.7
VARS-216ENST00000428445 G3V3Q6 166 aa10.66□□□□□ -0.7
VARS-216ENST00000428445 ARPC5O15511 151 aa10.66□□□□□ -0.7
VARS-216ENST00000428445 DGAT2L7PQ6IED9 249 aa10.66□□□□□ -0.7
VARS-216ENST00000428445 BAGE2Q86Y30 109 aa10.66□□□□□ -0.7
VARS-216ENST00000428445 CRPP02741 224 aa10.65□□□□□ -0.7
VARS-216ENST00000428445 ZNF345Q14585 488 aa10.65□□□□□ -0.7
VARS-216ENST00000428445 ZNF56Q15929 161 aa10.65□□□□□ -0.7
VARS-216ENST00000428445 MIAQ16674 131 aa10.65□□□□□ -0.7
VARS-216ENST00000428445 NTM-AS1Q6ZSK4 140 aa10.65□□□□□ -0.7
VARS-216ENST00000428445 OR10AG1Q8NH19 301 aa10.65□□□□□ -0.7
VARS-216ENST00000428445 SFT2D1Q8WV19 159 aa10.65□□□□□ -0.7
VARS-216ENST00000428445 CHCHD5Q9BSY4 110 aa10.65□□□□□ -0.7
VARS-216ENST00000428445 PFDN1O60925 122 aa10.64□□□□□ -0.71
VARS-216ENST00000428445 SPANXN1Q5VSR9 72 aa10.64□□□□□ -0.71
VARS-216ENST00000428445 KCNRGQ8N5I3 272 aa10.64□□□□□ -0.71
VARS-216ENST00000428445 VAX2Q9UIW0 290 aa10.64□□□□□ -0.71
VARS-216ENST00000428445 KRTAP26-1Q6PEX3 210 aa10.63□□□□□ -0.71
VARS-216ENST00000428445 TMUB2Q71RG4 321 aa10.63□□□□□ -0.71
VARS-216ENST00000428445 A0A0D9SG52 128 aa10.62□□□□□ -0.71
VARS-216ENST00000428445 HMSDA8MTL9 139 aa10.62□□□□□ -0.71
VARS-216ENST00000428445 SMIM17P0DL12 118 aa10.62□□□□□ -0.71
VARS-216ENST00000428445 EIF5AP63241 154 aaKnown RBP10.62□□□□□ -0.71
VARS-216ENST00000428445 GAGE6Q13070 117 aa10.62□□□□□ -0.71
VARS-216ENST00000428445 RGS21Q2M5E4 152 aa10.62□□□□□ -0.71
VARS-216ENST00000428445 PRR34Q9NV39 138 aa10.62□□□□□ -0.71
VARS-216ENST00000428445 F5H697 171 aa10.61□□□□□ -0.71
VARS-216ENST00000428445 LINC00269Q8N2A0 174 aa10.61□□□□□ -0.71
VARS-216ENST00000428445 C9orf163Q8N9P6 203 aa10.61□□□□□ -0.71
VARS-216ENST00000428445 A0A1B0GV50 99 aa10.6□□□□□ -0.71
VARS-216ENST00000428445 SCO2A0A1W2PP80 73 aa10.6□□□□□ -0.71
VARS-216ENST00000428445 H2AFB1P0C5Y9 115 aa10.6□□□□□ -0.71
VARS-216ENST00000428445 MT1HL1P0DM35 61 aa10.6□□□□□ -0.71
VARS-216ENST00000428445 RBX1P62877 108 aa10.6□□□□□ -0.71
VARS-216ENST00000428445 SDIM1Q6ZPB5 146 aa10.6□□□□□ -0.71
VARS-216ENST00000428445 CLRN3Q8NCR9 226 aa10.6□□□□□ -0.71
VARS-216ENST00000428445 FAM213BQ8TBF2 198 aa10.6□□□□□ -0.71
VARS-216ENST00000428445 KIF25-AS1Q9Y6Z4 181 aa10.6□□□□□ -0.71
VARS-216ENST00000428445 IGLV10-54A0A075B6I4 117 aa10.59□□□□□ -0.71
VARS-216ENST00000428445 TRBV25-1A0A075B6N4 114 aa10.59□□□□□ -0.71
VARS-216ENST00000428445 AP1S3Q96PC3 154 aa10.59□□□□□ -0.71
VARS-216ENST00000428445 DERL1Q9BUN8 251 aa10.59□□□□□ -0.71
VARS-216ENST00000428445 H7C1H1 209 aa10.58□□□□□ -0.72
VARS-216ENST00000428445 RPS20P60866 119 aaKnown RBP10.58□□□□□ -0.72
VARS-216ENST00000428445 IQCJQ1A5X6 159 aa10.58□□□□□ -0.72
VARS-216ENST00000428445 KANTRA0A1W2PQU2 76 aa10.57□□□□□ -0.72
VARS-216ENST00000428445 RAB5CP51148 216 aa10.57□□□□□ -0.72
VARS-216ENST00000428445 SMIM12Q96EX1 92 aa10.57□□□□□ -0.72
VARS-216ENST00000428445 MANBALQ9NQG1 85 aa10.57□□□□□ -0.72
VARS-216ENST00000428445 TRAV8-4A0A0B4J246 113 aa10.56□□□□□ -0.72
VARS-216ENST00000428445 IGHV1-24A0A0C4DH33 117 aa10.56□□□□□ -0.72
VARS-216ENST00000428445 A0A1B0GUV1 79 aa10.56□□□□□ -0.72
VARS-216ENST00000428445 P01737 135 aa10.56□□□□□ -0.72
VARS-216ENST00000428445 RPL35P42766 123 aaKnown RBP10.56□□□□□ -0.72
VARS-216ENST00000428445 TNXBP22105 4242 aa10.56□□□□□ -0.72
VARS-216ENST00000428445 TRAV1-1A0A0B4J248 108 aa10.55□□□□□ -0.72
VARS-216ENST00000428445 XKRY2A2RUG3 117 aa10.55□□□□□ -0.72
VARS-216ENST00000428445 F2Z2F3 143 aa10.55□□□□□ -0.72
VARS-216ENST00000428445 SMLR1H3BR10 107 aa10.55□□□□□ -0.72
VARS-216ENST00000428445 M0QY20 66 aa10.55□□□□□ -0.72
VARS-216ENST00000428445 BCL2L11O43521 198 aa10.55□□□□□ -0.72
VARS-216ENST00000428445 SLPIP03973 132 aa10.55□□□□□ -0.72
VARS-216ENST00000428445 CHTF8P0CG12 524 aa10.55□□□□□ -0.72
VARS-216ENST00000428445 GZMBP10144 247 aa10.55□□□□□ -0.72
VARS-216ENST00000428445 CACNG7P62955 275 aa10.55□□□□□ -0.72
VARS-216ENST00000428445 C11orf52Q96A22 123 aa10.55□□□□□ -0.72
VARS-216ENST00000428445 TEX46H3BTG2 121 aa10.54□□□□□ -0.72
VARS-216ENST00000428445 IGLC6P0CF74 106 aa10.54□□□□□ -0.72
VARS-216ENST00000428445 C20orf203Q8NBC4 194 aa10.54□□□□□ -0.72
VARS-216ENST00000428445 DPH3Q96FX2 82 aa10.54□□□□□ -0.72
VARS-216ENST00000428445 GFRA4Q9GZZ7 299 aa10.54□□□□□ -0.72
VARS-216ENST00000428445 IGLV4-60A0A075B6I1 120 aa10.53□□□□□ -0.72
VARS-216ENST00000428445 hDV102S1A0JD36 115 aa10.53□□□□□ -0.72
VARS-216ENST00000428445 MGPP08493 103 aa10.53□□□□□ -0.72
VARS-216ENST00000428445 REG3AQ06141 175 aa10.53□□□□□ -0.72
VARS-216ENST00000428445 FER1L6-AS1Q8NA97 138 aa10.53□□□□□ -0.72
VARS-216ENST00000428445 BIN3Q9NQY0 253 aa10.53□□□□□ -0.72
VARS-216ENST00000428445 C19orf71A6NCJ1 209 aa10.52□□□□□ -0.73
VARS-216ENST00000428445 CNBPP62633 177 aaKnown RBP10.52□□□□□ -0.73
VARS-216ENST00000428445 EIF5AL1Q6IS14 154 aaKnown RBP10.52□□□□□ -0.73
VARS-216ENST00000428445 WDR73Q6P4I2 378 aa10.52□□□□□ -0.73
VARS-216ENST00000428445 PGLYRP4Q96LB8 373 aa10.52□□□□□ -0.73
VARS-216ENST00000428445 TRGC1P0CF51 173 aa10.51□□□□□ -0.73
VARS-216ENST00000428445 CCL20P78556 96 aa10.51□□□□□ -0.73
VARS-216ENST00000428445 ODF1Q14990 250 aa10.51□□□□□ -0.73
VARS-216ENST00000428445 OR2D3Q8NGH3 330 aa10.51□□□□□ -0.73
VARS-216ENST00000428445 TPPP3Q9BW30 176 aa10.51□□□□□ -0.73
VARS-216ENST00000428445 NIT2Q9NQR4 276 aa10.51□□□□□ -0.73
VARS-216ENST00000428445 A0A087WYN8 130 aa10.5□□□□□ -0.73
VARS-216ENST00000428445 PDE6DO43924 150 aa10.5□□□□□ -0.73
VARS-216ENST00000428445 NKX2-5P52952 324 aaPredicted RBP10.5□□□□□ -0.73
VARS-216ENST00000428445 CIRBPQ14011 172 aaKnown RBP10.5□□□□□ -0.73
VARS-216ENST00000428445 SUMO4Q6EEV6 95 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms