RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 TMEM170BQ5T4T1 132 aa5.78□□□□□ -1.48
LRCH3-204ENST00000428136 C1QTNF4Q9BXJ3 329 aa5.78□□□□□ -1.48
LRCH3-204ENST00000428136 IGLV4-3A0A075B6K6 122 aa5.78□□□□□ -1.48
LRCH3-204ENST00000428136 M0QXV9 152 aa5.78□□□□□ -1.48
LRCH3-204ENST00000428136 RHODO00212 210 aa5.78□□□□□ -1.48
LRCH3-204ENST00000428136 ZNF22P17026 224 aaPredicted RBP5.78□□□□□ -1.48
LRCH3-204ENST00000428136 FAM74A4Q5TZK3 123 aa5.78□□□□□ -1.48
LRCH3-204ENST00000428136 C10orf126Q8N4M7 172 aa5.78□□□□□ -1.48
LRCH3-204ENST00000428136 ZNF702PQ9H963 129 aa5.78□□□□□ -1.48
LRCH3-204ENST00000428136 RBMY1A1P0DJD3 496 aaKnown RBP5.77□□□□□ -1.49
LRCH3-204ENST00000428136 RBMY1CP0DJD4 496 aa5.77□□□□□ -1.49
LRCH3-204ENST00000428136 AZU1P20160 251 aa5.77□□□□□ -1.49
LRCH3-204ENST00000428136 SYNJ2BPP57105 145 aa5.77□□□□□ -1.49
LRCH3-204ENST00000428136 FOXI1Q12951 378 aa5.77□□□□□ -1.49
LRCH3-204ENST00000428136 RBMY1FQ15415 496 aaKnown RBP5.77□□□□□ -1.49
LRCH3-204ENST00000428136 Q6YL49 198 aa5.77□□□□□ -1.49
LRCH3-204ENST00000428136 LINC00467Q9BRT7 94 aa5.77□□□□□ -1.49
LRCH3-204ENST00000428136 VPREB3Q9UKI3 123 aa5.77□□□□□ -1.49
LRCH3-204ENST00000428136 LGALS3P17931 250 aaKnown RBP5.77□□□□□ -1.49
LRCH3-204ENST00000428136 HOXD3P31249 432 aaPredicted RBP5.77□□□□□ -1.49
LRCH3-204ENST00000428136 PRO1854Q9UHT4 67 aa5.77□□□□□ -1.49
LRCH3-204ENST00000428136 Q8N2B8 174 aa5.76□□□□□ -1.49
LRCH3-204ENST00000428136 LINC01600Q96MT4 127 aa5.76□□□□□ -1.49
LRCH3-204ENST00000428136 OPRPNQ99935 248 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-204ENST00000428136 SPTAN1Q13813 2472 aaKnown RBP5.76□□□□□ -1.49
LRCH3-204ENST00000428136 A0A0B4J2C4 111 aa5.76□□□□□ -1.49
LRCH3-204ENST00000428136 M0R2P5 195 aa5.76□□□□□ -1.49
LRCH3-204ENST00000428136 EIF4EBP3O60516 100 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-204ENST00000428136 IGKV3-20P01619 116 aa5.76□□□□□ -1.49
LRCH3-204ENST00000428136 INSL3P51460 131 aa5.76□□□□□ -1.49
LRCH3-204ENST00000428136 MRPS36P82909 103 aaKnown RBP5.76□□□□□ -1.49
LRCH3-204ENST00000428136 APOMO95445 188 aa5.76□□□□□ -1.49
LRCH3-204ENST00000428136 TCL1BO95988 128 aa5.76□□□□□ -1.49
LRCH3-204ENST00000428136 PSMB2P49721 201 aa5.76□□□□□ -1.49
LRCH3-204ENST00000428136 DEFB104AQ8WTQ1 72 aa5.76□□□□□ -1.49
LRCH3-204ENST00000428136 TMEM263Q8WUH6 116 aaKnown RBP5.76□□□□□ -1.49
LRCH3-204ENST00000428136 AKAP6Q13023 2319 aa5.76□□□□□ -1.49
LRCH3-204ENST00000428136 VCX2Q9H322 139 aa5.75□□□□□ -1.49
LRCH3-204ENST00000428136 MTURNQ8N3F0 131 aa5.75□□□□□ -1.49
LRCH3-204ENST00000428136 GTSF1LQ9H1H1 148 aa5.75□□□□□ -1.49
LRCH3-204ENST00000428136 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.75□□□□□ -1.496e-9■■■■□ 21.6
LRCH3-204ENST00000428136 LOC107984156A0A0G2JMH3 177 aa5.74□□□□□ -1.49
LRCH3-204ENST00000428136 A0A0J9YXV3 536 aa5.74□□□□□ -1.49
LRCH3-204ENST00000428136 A8MWV9 139 aa5.74□□□□□ -1.49
LRCH3-204ENST00000428136 H3BMM0 161 aa5.74□□□□□ -1.49
LRCH3-204ENST00000428136 IGHV3-33P01772 117 aa5.74□□□□□ -1.49
LRCH3-204ENST00000428136 TCTEX1D4Q5JR98 221 aa5.74□□□□□ -1.49
LRCH3-204ENST00000428136 ARL17AQ8IVW1 177 aa5.74□□□□□ -1.49
LRCH3-204ENST00000428136 LITAFQ99732 161 aa5.74□□□□□ -1.49
LRCH3-204ENST00000428136 RBMY1BA6NDE4 496 aaKnown RBP5.74□□□□□ -1.49
LRCH3-204ENST00000428136 RBMY1EA6NEQ0 496 aaKnown RBP5.74□□□□□ -1.49
LRCH3-204ENST00000428136 RBMY1DP0C7P1 496 aaKnown RBP5.74□□□□□ -1.49
LRCH3-204ENST00000428136 TEN1Q86WV5 123 aa5.74□□□□□ -1.49
LRCH3-204ENST00000428136 CARD19Q96LW7 228 aa5.74□□□□□ -1.49
LRCH3-204ENST00000428136 CITED1Q99966 193 aa5.74□□□□□ -1.49
LRCH3-204ENST00000428136 CDIP1Q9H305 208 aa5.74□□□□□ -1.49
LRCH3-204ENST00000428136 A4D1N5 150 aa5.74□□□□□ -1.49
LRCH3-204ENST00000428136 SPTBN4Q9H254 2564 aa5.74□□□□□ -1.49
LRCH3-204ENST00000428136 A0A0J9YXY3 114 aa5.73□□□□□ -1.49
LRCH3-204ENST00000428136 BEAN1Q3B7T3 259 aa5.73□□□□□ -1.49
LRCH3-204ENST00000428136 PPDPFLQ8WWR9 84 aa5.73□□□□□ -1.49
LRCH3-204ENST00000428136 RNF183Q96D59 192 aa5.73□□□□□ -1.49
LRCH3-204ENST00000428136 CHCHD7Q9BUK0 85 aa5.73□□□□□ -1.49
LRCH3-204ENST00000428136 CELSR2Q9HCU4 2923 aa5.73□□□□□ -1.49
LRCH3-204ENST00000428136 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.73□□□□□ -1.49
LRCH3-204ENST00000428136 TINCRA0A1B0GVN0 87 aa5.73□□□□□ -1.49
LRCH3-204ENST00000428136 IGHV3-30-3P0DP02 117 aa5.73□□□□□ -1.49
LRCH3-204ENST00000428136 MUSTN1Q8IVN3 82 aa5.73□□□□□ -1.49
LRCH3-204ENST00000428136 NRGNQ92686 78 aa5.73□□□□□ -1.49
LRCH3-204ENST00000428136 DNAJC30Q96LL9 226 aa5.73□□□□□ -1.49
LRCH3-204ENST00000428136 SPANXA1Q9NS26 97 aa5.73□□□□□ -1.49
LRCH3-204ENST00000428136 DOPEY1Q5JWR5 2465 aa5.73□□□□□ -1.49
LRCH3-204ENST00000428136 KNCNA6PVL3 124 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 TGFAP01135 160 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 C11orf72Q8NBR9 251 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 DUX5Q96PT3 197 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 SPANXDQ9BXN6 97 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 SPANXCQ9NY87 97 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 CHD8Q9HCK8 2581 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 NCOR2Q9Y618 2525 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 IGHV1-58A0A0C4DH39 117 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 IGHV4-31P0DP07 118 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 PROK1P58294 105 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 SMAGPQ0VAQ4 97 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 UBE2D4Q9Y2X8 147 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 DEFB131AP59861 70 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 ZNF415Q09FC8 603 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 Q6ZSN1 163 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 CFAP46Q8IYW2 2715 aa5.72□□□□□ -1.49
LRCH3-204ENST00000428136 IGHV3-53P01767 116 aa5.71□□□□□ -1.49
LRCH3-204ENST00000428136 CD28P10747 220 aa5.71□□□□□ -1.49
LRCH3-204ENST00000428136 SLURP1P55000 103 aa5.71□□□□□ -1.49
LRCH3-204ENST00000428136 FHL3Q13643 280 aa5.71□□□□□ -1.49
LRCH3-204ENST00000428136 C4orf3Q8WVX3 66 aa5.71□□□□□ -1.49
LRCH3-204ENST00000428136 SPXQ9BT56 116 aa5.71□□□□□ -1.49
LRCH3-204ENST00000428136 TIMM21Q9BVV7 248 aa5.71□□□□□ -1.49
LRCH3-204ENST00000428136 ERG28Q9UKR5 140 aa5.71□□□□□ -1.49
LRCH3-204ENST00000428136 TNFRSF18Q9Y5U5 241 aa5.71□□□□□ -1.49
LRCH3-204ENST00000428136 DOPEY2Q9Y3R5 2298 aa5.71□□□□□ -1.5
LRCH3-204ENST00000428136 TRBV30A0A0K0K1B3 111 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms