RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 PTPN13Q12923 2485 aa6.33□□□□□ -1.4
SH3D19-204ENST00000427414 FASNP49327 2511 aaKnown RBP6.33□□□□□ -1.4
SH3D19-204ENST00000427414 IGKV3D-20A0A0C4DH25 116 aa6.32□□□□□ -1.4
SH3D19-204ENST00000427414 ADARB2-AS1A8MUL3 147 aa6.32□□□□□ -1.4
SH3D19-204ENST00000427414 CITED1Q99966 193 aa6.32□□□□□ -1.4
SH3D19-204ENST00000427414 SCGB3A1Q96QR1 104 aa6.32□□□□□ -1.4
SH3D19-204ENST00000427414 SPANXN1Q5VSR9 72 aa6.32□□□□□ -1.4
SH3D19-204ENST00000427414 POM121L12Q8N7R1 296 aa6.32□□□□□ -1.4
SH3D19-204ENST00000427414 RNF183Q96D59 192 aa6.32□□□□□ -1.4
SH3D19-204ENST00000427414 C11orf21Q9P2W6 132 aa6.32□□□□□ -1.4
SH3D19-204ENST00000427414 SPTAN1Q13813 2472 aaKnown RBP6.32□□□□□ -1.4
SH3D19-204ENST00000427414 SPG11Q96JI7 2443 aa6.31□□□□□ -1.4
SH3D19-204ENST00000427414 TRAV12-1A0A0B4J245 112 aa6.31□□□□□ -1.4
SH3D19-204ENST00000427414 ZNF815PA8K554 130 aa6.31□□□□□ -1.4
SH3D19-204ENST00000427414 PPP1R17O96001 155 aa6.31□□□□□ -1.4
SH3D19-204ENST00000427414 ASIPP42127 132 aa6.31□□□□□ -1.4
SH3D19-204ENST00000427414 C18orf65Q6ZTR6 163 aa6.31□□□□□ -1.4
SH3D19-204ENST00000427414 PPDPFLQ8WWR9 84 aa6.31□□□□□ -1.4
SH3D19-204ENST00000427414 PRADC1Q9BSG0 188 aa6.31□□□□□ -1.4
SH3D19-204ENST00000427414 ZNF256Q9Y2P7 627 aaPredicted RBP6.31□□□□□ -1.4
SH3D19-204ENST00000427414 INAFM1C9JVW0 142 aa6.31□□□□□ -1.4
SH3D19-204ENST00000427414 TSPAN13O95857 204 aa6.31□□□□□ -1.4
SH3D19-204ENST00000427414 IGLV1-51P01701 117 aa6.31□□□□□ -1.4
SH3D19-204ENST00000427414 PRSS29PA6NIE9 313 aa6.3□□□□□ -1.4
SH3D19-204ENST00000427414 KHDC1LQ5JSQ8 128 aa6.3□□□□□ -1.4
SH3D19-204ENST00000427414 TEN1Q86WV5 123 aa6.3□□□□□ -1.4
SH3D19-204ENST00000427414 CARD19Q96LW7 228 aa6.3□□□□□ -1.4
SH3D19-204ENST00000427414 SMIM2Q9BVW6 85 aa6.3□□□□□ -1.4
SH3D19-204ENST00000427414 ERG28Q9UKR5 140 aa6.3□□□□□ -1.4
SH3D19-204ENST00000427414 TRGV11A0A075B6L2 103 aa6.3□□□□□ -1.4
SH3D19-204ENST00000427414 H3BMM0 161 aa6.3□□□□□ -1.4
SH3D19-204ENST00000427414 H3BVH4 76 aa6.3□□□□□ -1.4
SH3D19-204ENST00000427414 BEAN1Q3B7T3 259 aa6.3□□□□□ -1.4
SH3D19-204ENST00000427414 ORMDL2Q53FV1 153 aa6.3□□□□□ -1.4
SH3D19-204ENST00000427414 TMEM61Q8N0U2 210 aa6.3□□□□□ -1.4
SH3D19-204ENST00000427414 NEXN-AS1Q8NBZ9 246 aa6.3□□□□□ -1.4
SH3D19-204ENST00000427414 PLEKHB2Q96CS7 222 aa6.3□□□□□ -1.4
SH3D19-204ENST00000427414 ANAPC13Q9BS18 74 aa6.3□□□□□ -1.4
SH3D19-204ENST00000427414 CELSR2Q9HCU4 2923 aa6.3□□□□□ -1.4
SH3D19-204ENST00000427414 M0R381 172 aa6.29□□□□□ -1.4
SH3D19-204ENST00000427414 ZNF688P0C7X2 276 aa6.29□□□□□ -1.4
SH3D19-204ENST00000427414 UBE2D1P51668 147 aa6.29□□□□□ -1.4
SH3D19-204ENST00000427414 LYRM7Q5U5X0 104 aa6.29□□□□□ -1.4
SH3D19-204ENST00000427414 FAM159AQ6UWV7 190 aa6.29□□□□□ -1.4
SH3D19-204ENST00000427414 SMR3AQ99954 134 aa6.29□□□□□ -1.4
SH3D19-204ENST00000427414 MAP6D1Q9H9H5 199 aa6.29□□□□□ -1.4
SH3D19-204ENST00000427414 UBE2D3P61077 147 aa6.29□□□□□ -1.4
SH3D19-204ENST00000427414 UBE2D2P62837 147 aa6.29□□□□□ -1.4
SH3D19-204ENST00000427414 RPL32P62910 135 aaKnown RBP6.29□□□□□ -1.4
SH3D19-204ENST00000427414 DEFB136Q30KP8 78 aa6.29□□□□□ -1.4
SH3D19-204ENST00000427414 ANXA2RQ3ZCQ2 193 aa6.29□□□□□ -1.4
SH3D19-204ENST00000427414 TOMM6Q96B49 74 aa6.29□□□□□ -1.4
SH3D19-204ENST00000427414 C9orf85Q96MD7 179 aa6.29□□□□□ -1.4
SH3D19-204ENST00000427414 VCX2Q9H322 139 aa6.29□□□□□ -1.4
SH3D19-204ENST00000427414 EDA2RQ9HAV5 297 aa6.29□□□□□ -1.4
SH3D19-204ENST00000427414 ITPR3Q14573 2671 aa6.28□□□□□ -1.4
SH3D19-204ENST00000427414 A8MWV9 139 aa6.28□□□□□ -1.4
SH3D19-204ENST00000427414 WIPF1O43516 503 aa6.28□□□□□ -1.4
SH3D19-204ENST00000427414 TCL1BO95988 128 aa6.28□□□□□ -1.4
SH3D19-204ENST00000427414 SCGB1C2P0DMR2 95 aa6.28□□□□□ -1.4
SH3D19-204ENST00000427414 EDN2P20800 178 aa6.28□□□□□ -1.4
SH3D19-204ENST00000427414 PRR9Q5T870 116 aa6.28□□□□□ -1.4
SH3D19-204ENST00000427414 Q6ZQT7 251 aa6.28□□□□□ -1.4
SH3D19-204ENST00000427414 SS18L2Q9UHA2 77 aa6.28□□□□□ -1.4
SH3D19-204ENST00000427414 CREBBPQ92793 2442 aa6.28□□□□□ -1.4
SH3D19-204ENST00000427414 RNASE4P34096 147 aaKnown RBP6.28□□□□□ -1.4
SH3D19-204ENST00000427414 SUMO2P61956 95 aaKnown RBP6.28□□□□□ -1.4
SH3D19-204ENST00000427414 ZFAND6Q6FIF0 208 aa6.28□□□□□ -1.4
SH3D19-204ENST00000427414 C2orf66Q6UXQ4 117 aa6.28□□□□□ -1.4
SH3D19-204ENST00000427414 LINC00482Q8N8I6 264 aa6.28□□□□□ -1.4
SH3D19-204ENST00000427414 BAALCQ8WXS3 180 aa6.28□□□□□ -1.4
SH3D19-204ENST00000427414 KIR2DL4Q99706 377 aa6.28□□□□□ -1.4
SH3D19-204ENST00000427414 TACC2O95359 2948 aa6.28□□□□□ -1.4
SH3D19-204ENST00000427414 IGHV1OR15-1A0A075B7D0 117 aa6.27□□□□□ -1.41
SH3D19-204ENST00000427414 CD7P09564 240 aa6.27□□□□□ -1.41
SH3D19-204ENST00000427414 RASL10AQ92737 203 aa6.27□□□□□ -1.41
SH3D19-204ENST00000427414 TRBV20-1A0A075B6N2 111 aa6.27□□□□□ -1.41
SH3D19-204ENST00000427414 SPRY2O43597 315 aa6.27□□□□□ -1.41
SH3D19-204ENST00000427414 DEFB131AP59861 70 aa6.27□□□□□ -1.41
SH3D19-204ENST00000427414 C9orf66Q5T8R8 295 aa6.27□□□□□ -1.41
SH3D19-204ENST00000427414 GAGE5Q13069 117 aa6.26□□□□□ -1.41
SH3D19-204ENST00000427414 GAGE6Q13070 117 aa6.26□□□□□ -1.41
SH3D19-204ENST00000427414 CRYBG3Q68DQ2 2970 aa6.26□□□□□ -1.41
SH3D19-204ENST00000427414 TRPT1Q86TN4 253 aaKnown RBP6.26□□□□□ -1.41
SH3D19-204ENST00000427414 ANKRD29Q8N6D5 301 aa6.26□□□□□ -1.41
SH3D19-204ENST00000427414 RPL39LQ96EH5 51 aaKnown RBP6.26□□□□□ -1.41
SH3D19-204ENST00000427414 DPH3P1Q9H4G8 78 aa6.26□□□□□ -1.41
SH3D19-204ENST00000427414 UNC79Q9P2D8 2635 aa6.26□□□□□ -1.41
SH3D19-204ENST00000427414 TMEM262E9PQX1 116 aa6.26□□□□□ -1.41
SH3D19-204ENST00000427414 F6UB75 175 aa6.26□□□□□ -1.41
SH3D19-204ENST00000427414 RNASE3P12724 160 aaKnown RBP6.26□□□□□ -1.41
SH3D19-204ENST00000427414 S100A4P26447 101 aaKnown RBP6.26□□□□□ -1.41
SH3D19-204ENST00000427414 EMP1P54849 157 aa6.26□□□□□ -1.41
SH3D19-204ENST00000427414 CSPG4Q6UVK1 2322 aa6.25□□□□□ -1.41
SH3D19-204ENST00000427414 IGHV3-16A0A0C4DH30 117 aa6.25□□□□□ -1.41
SH3D19-204ENST00000427414 B5MCH6 92 aa6.25□□□□□ -1.41
SH3D19-204ENST00000427414 C14orf178Q8N769 122 aaPredicted RBP6.25□□□□□ -1.41
SH3D19-204ENST00000427414 WFDC9Q8NEX5 89 aa6.25□□□□□ -1.41
SH3D19-204ENST00000427414 PHLDA3Q9Y5J5 127 aa6.25□□□□□ -1.41
SH3D19-204ENST00000427414 A0A0J9YY99 117 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms