RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 CEMP1Q6PRD7 247 aaPredicted RBP10.67□□□□□ -0.7
ERCC3-202ENST00000426778 APRG1Q8IVJ8 170 aa10.67□□□□□ -0.7
ERCC3-202ENST00000426778 VCYO14598 125 aa10.66□□□□□ -0.7
ERCC3-202ENST00000426778 ID1P41134 155 aa10.66□□□□□ -0.7
ERCC3-202ENST00000426778 DEFB136Q30KP8 78 aa10.66□□□□□ -0.7
ERCC3-202ENST00000426778 RAX2Q96IS3 184 aa10.66□□□□□ -0.7
ERCC3-202ENST00000426778 NBPF19A0A087WUL8 3843 aa10.65□□□□□ -0.7
ERCC3-202ENST00000426778 IGHV3-16A0A0C4DH30 117 aa10.65□□□□□ -0.7
ERCC3-202ENST00000426778 ZNF876PQ49A33 203 aa10.65□□□□□ -0.7
ERCC3-202ENST00000426778 DUX3Q96PT4 197 aa10.65□□□□□ -0.7
ERCC3-202ENST00000426778 IGHV4OR15-8A0A075B7B6 117 aa10.64□□□□□ -0.71
ERCC3-202ENST00000426778 A0A087WW49 117 aa10.64□□□□□ -0.71
ERCC3-202ENST00000426778 ATP6V0BQ99437 205 aa10.64□□□□□ -0.71
ERCC3-202ENST00000426778 SIGMAR1Q99720 223 aa10.64□□□□□ -0.71
ERCC3-202ENST00000426778 NXPH4O95158 308 aa10.64□□□□□ -0.71
ERCC3-202ENST00000426778 MED14OSP0DP75 135 aa10.64□□□□□ -0.71
ERCC3-202ENST00000426778 C18orf65Q6ZTR6 163 aa10.64□□□□□ -0.71
ERCC3-202ENST00000426778 NFE4Q86UQ8 179 aa10.64□□□□□ -0.71
ERCC3-202ENST00000426778 M0QY20 66 aa10.64□□□□□ -0.71
ERCC3-202ENST00000426778 CFHR3Q02985 330 aa10.64□□□□□ -0.71
ERCC3-202ENST00000426778 A0A0J9YX75 114 aa10.63□□□□□ -0.71
ERCC3-202ENST00000426778 A0A0J9YXV3 536 aa10.63□□□□□ -0.71
ERCC3-202ENST00000426778 PSMB8P28062 276 aa10.63□□□□□ -0.71
ERCC3-202ENST00000426778 HERVK_113P61574 105 aa10.63□□□□□ -0.71
ERCC3-202ENST00000426778 NDUFA11Q86Y39 141 aa10.63□□□□□ -0.71
ERCC3-202ENST00000426778 J3QQQ9 107 aa10.63□□□□□ -0.71
ERCC3-202ENST00000426778 NDUFS8O00217 210 aa10.63□□□□□ -0.71
ERCC3-202ENST00000426778 PPP1R17O96001 155 aa10.63□□□□□ -0.71
ERCC3-202ENST00000426778 CFC1BP0CG36 223 aa10.63□□□□□ -0.71
ERCC3-202ENST00000426778 CFC1P0CG37 223 aa10.63□□□□□ -0.71
ERCC3-202ENST00000426778 UBE2D1P51668 147 aa10.63□□□□□ -0.71
ERCC3-202ENST00000426778 TRAV2A0A0B4J234 112 aa10.62□□□□□ -0.71
ERCC3-202ENST00000426778 TCL1BO95988 128 aa10.62□□□□□ -0.71
ERCC3-202ENST00000426778 RBMY1A1P0DJD3 496 aaKnown RBP10.62□□□□□ -0.71
ERCC3-202ENST00000426778 RBMY1CP0DJD4 496 aa10.62□□□□□ -0.71
ERCC3-202ENST00000426778 RBMY1FQ15415 496 aaKnown RBP10.62□□□□□ -0.71
ERCC3-202ENST00000426778 H3BUA1 57 aa10.62□□□□□ -0.71
ERCC3-202ENST00000426778 DLX4Q92988 240 aaPredicted RBP10.62□□□□□ -0.71
ERCC3-202ENST00000426778 TMEM238LA0A1B0GVL6 79 aa10.61□□□□□ -0.71
ERCC3-202ENST00000426778 A6NJY4 79 aa10.61□□□□□ -0.71
ERCC3-202ENST00000426778 SCGB1C2P0DMR2 95 aa10.61□□□□□ -0.71
ERCC3-202ENST00000426778 LGALS3P17931 250 aaKnown RBP10.61□□□□□ -0.71
ERCC3-202ENST00000426778 MTORP42345 2549 aa10.61□□□□□ -0.71
ERCC3-202ENST00000426778 IGHV1OR15-1A0A075B7D0 117 aa10.61□□□□□ -0.71
ERCC3-202ENST00000426778 TRBV27A0A0K0K1C4 114 aa10.61□□□□□ -0.71
ERCC3-202ENST00000426778 A8MZ25 164 aa10.61□□□□□ -0.71
ERCC3-202ENST00000426778 IGHV3-30P01768 117 aa10.61□□□□□ -0.71
ERCC3-202ENST00000426778 IGHV3-30-5P0DP03 117 aa10.61□□□□□ -0.71
ERCC3-202ENST00000426778 NPC2P61916 151 aa10.61□□□□□ -0.71
ERCC3-202ENST00000426778 SNRPD3P62318 126 aaKnown RBP10.61□□□□□ -0.71
ERCC3-202ENST00000426778 CFAP126Q5VTH2 177 aa10.61□□□□□ -0.71
ERCC3-202ENST00000426778 POM121L12Q8N7R1 296 aa10.61□□□□□ -0.71
ERCC3-202ENST00000426778 SYT8Q8NBV8 401 aa10.61□□□□□ -0.71
ERCC3-202ENST00000426778 SPXQ9BT56 116 aa10.61□□□□□ -0.71
ERCC3-202ENST00000426778 C9orf85Q96MD7 179 aa10.61□□□□□ -0.71
ERCC3-202ENST00000426778 AMELXQ99217 191 aa10.61□□□□□ -0.71
ERCC3-202ENST00000426778 J3QR89 54 aa10.6□□□□□ -0.71
ERCC3-202ENST00000426778 LGALS9O00182 355 aa10.6□□□□□ -0.71
ERCC3-202ENST00000426778 FHL3Q13643 280 aa10.6□□□□□ -0.71
ERCC3-202ENST00000426778 EIF4EBP3O60516 100 aaPredicted RBP10.6□□□□□ -0.71
ERCC3-202ENST00000426778 BEX4Q9NWD9 120 aaPredicted RBP10.6□□□□□ -0.71
ERCC3-202ENST00000426778 TRAV8-3A0A0A6YYJ7 113 aa10.59□□□□□ -0.71
ERCC3-202ENST00000426778 A4D1N5 150 aa10.59□□□□□ -0.71
ERCC3-202ENST00000426778 LINC01619G3V211 115 aa10.59□□□□□ -0.71
ERCC3-202ENST00000426778 TIMM17AQ99595 171 aa10.59□□□□□ -0.71
ERCC3-202ENST00000426778 PRORYQ9H606 182 aa10.59□□□□□ -0.71
ERCC3-202ENST00000426778 ACANP16112 2415 aa10.59□□□□□ -0.71
ERCC3-202ENST00000426778 FOXI1Q12951 378 aa10.59□□□□□ -0.71
ERCC3-202ENST00000426778 TRPT1Q86TN4 253 aaKnown RBP10.59□□□□□ -0.71
ERCC3-202ENST00000426778 B4DSR2 109 aa10.58□□□□□ -0.72
ERCC3-202ENST00000426778 K7EQG2 157 aa10.58□□□□□ -0.72
ERCC3-202ENST00000426778 HOXD3P31249 432 aaPredicted RBP10.58□□□□□ -0.72
ERCC3-202ENST00000426778 SLURP1P55000 103 aa10.58□□□□□ -0.72
ERCC3-202ENST00000426778 SLC25A29Q8N8R3 303 aa10.58□□□□□ -0.72
ERCC3-202ENST00000426778 TMEM141Q96I45 108 aa10.58□□□□□ -0.72
ERCC3-202ENST00000426778 SETXQ7Z333 2677 aaKnown RBP10.58□□□□□ -0.72
ERCC3-202ENST00000426778 IGHV3-38A0A0C4DH36 116 aa10.58□□□□□ -0.72
ERCC3-202ENST00000426778 K7EMT4 169 aa10.58□□□□□ -0.72
ERCC3-202ENST00000426778 TRBV7-9A0A0J9YWB2 115 aa10.57□□□□□ -0.72
ERCC3-202ENST00000426778 ZNF22P17026 224 aaPredicted RBP10.57□□□□□ -0.72
ERCC3-202ENST00000426778 ELANEP08246 267 aa10.57□□□□□ -0.72
ERCC3-202ENST00000426778 DEFB131AP59861 70 aa10.57□□□□□ -0.72
ERCC3-202ENST00000426778 KHDC1LQ5JSQ8 128 aa10.57□□□□□ -0.72
ERCC3-202ENST00000426778 MUSTN1Q8IVN3 82 aa10.57□□□□□ -0.72
ERCC3-202ENST00000426778 C20orf203Q8NBC4 194 aa10.57□□□□□ -0.72
ERCC3-202ENST00000426778 C1QTNF4Q9BXJ3 329 aa10.57□□□□□ -0.72
ERCC3-202ENST00000426778 VCX2Q9H322 139 aa10.57□□□□□ -0.72
ERCC3-202ENST00000426778 IGLV4-3A0A075B6K6 122 aa10.56□□□□□ -0.72
ERCC3-202ENST00000426778 UBE2D3P61077 147 aa10.56□□□□□ -0.72
ERCC3-202ENST00000426778 UBE2D2P62837 147 aa10.56□□□□□ -0.72
ERCC3-202ENST00000426778 CARD19Q96LW7 228 aa10.56□□□□□ -0.72
ERCC3-202ENST00000426778 USP24Q9UPU5 2620 aa10.56□□□□□ -0.72
ERCC3-202ENST00000426778 TCTEX1D4Q5JR98 221 aa10.56□□□□□ -0.72
ERCC3-202ENST00000426778 PAPPA-AS1Q5QFB9 102 aa10.56□□□□□ -0.72
ERCC3-202ENST00000426778 Q6ZSN1 163 aa10.56□□□□□ -0.72
ERCC3-202ENST00000426778 Q6ZSV7 163 aa10.56□□□□□ -0.72
ERCC3-202ENST00000426778 C10orf126Q8N4M7 172 aa10.56□□□□□ -0.72
ERCC3-202ENST00000426778 SPATA25Q9BR10 227 aa10.56□□□□□ -0.72
ERCC3-202ENST00000426778 TMEM223A0PJW6 202 aa10.55□□□□□ -0.72
ERCC3-202ENST00000426778 BRI3O95415 125 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms