RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 C11orf72Q8NBR9 251 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 WFDC9Q8NEX5 89 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 RPL39LQ96EH5 51 aaKnown RBP6.88□□□□□ -1.31
HMGB4-201ENST00000425537 MIEN1Q9BRT3 115 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 JPT2Q9H910 190 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 CYSLTR1Q9Y271 337 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 TENM1Q9UKZ4 2725 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 COL6A5A8TX70 2615 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 SORL1Q92673 2214 aa6.88□□□□□ -1.31
HMGB4-201ENST00000425537 SDHAF1A6NFY7 115 aa6.87□□□□□ -1.31
HMGB4-201ENST00000425537 SMIM9A6NGZ8 99 aa6.87□□□□□ -1.31
HMGB4-201ENST00000425537 RS1O15537 224 aa6.87□□□□□ -1.31
HMGB4-201ENST00000425537 APOC4P55056 127 aa6.87□□□□□ -1.31
HMGB4-201ENST00000425537 DAZ2Q13117 558 aaKnown RBP6.87□□□□□ -1.31
HMGB4-201ENST00000425537 SHISA2Q6UWI4 295 aa6.87□□□□□ -1.31
HMGB4-201ENST00000425537 LINC00173Q6ZV60 143 aa6.87□□□□□ -1.31
HMGB4-201ENST00000425537 MRPL52Q86TS9 123 aaKnown RBP6.87□□□□□ -1.31
HMGB4-201ENST00000425537 SPATA3Q8NHX4 192 aa6.87□□□□□ -1.31
HMGB4-201ENST00000425537 TOMM6Q96B49 74 aa6.87□□□□□ -1.31
HMGB4-201ENST00000425537 SCGB3A1Q96QR1 104 aa6.87□□□□□ -1.31
HMGB4-201ENST00000425537 UQCR10Q9UDW1 63 aa6.87□□□□□ -1.31
HMGB4-201ENST00000425537 TNFRSF18Q9Y5U5 241 aa6.87□□□□□ -1.31
HMGB4-201ENST00000425537 LINC00587B1AMM8 73 aa6.86□□□□□ -1.31
HMGB4-201ENST00000425537 I3L3M4 83 aa6.86□□□□□ -1.31
HMGB4-201ENST00000425537 WIPF1O43516 503 aa6.86□□□□□ -1.31
HMGB4-201ENST00000425537 AZU1P20160 251 aa6.86□□□□□ -1.31
HMGB4-201ENST00000425537 CFAP126Q5VTH2 177 aa6.86□□□□□ -1.31
HMGB4-201ENST00000425537 OR4C5Q8NGB2 326 aa6.86□□□□□ -1.31
HMGB4-201ENST00000425537 KIR2DL5BQ8NHK3 375 aa6.86□□□□□ -1.31
HMGB4-201ENST00000425537 IL17DQ8TAD2 202 aa6.86□□□□□ -1.31
HMGB4-201ENST00000425537 RNASE8Q8TDE3 154 aaKnown RBP6.86□□□□□ -1.31
HMGB4-201ENST00000425537 TMEM141Q96I45 108 aa6.86□□□□□ -1.31
HMGB4-201ENST00000425537 PMCHL2Q9BQD1 86 aa6.86□□□□□ -1.31
HMGB4-201ENST00000425537 STAB1Q9NY15 2570 aa6.86□□□□□ -1.31
HMGB4-201ENST00000425537 TRGV1A0A0A0MS02 117 aa6.85□□□□□ -1.31
HMGB4-201ENST00000425537 TRAV12-1A0A0B4J245 112 aa6.85□□□□□ -1.31
HMGB4-201ENST00000425537 TRAV4A0A0B4J268 109 aa6.85□□□□□ -1.31
HMGB4-201ENST00000425537 IGHV3-53P01767 116 aa6.85□□□□□ -1.31
HMGB4-201ENST00000425537 PAPPA-AS1Q5QFB9 102 aa6.85□□□□□ -1.31
HMGB4-201ENST00000425537 C2orf66Q6UXQ4 117 aa6.85□□□□□ -1.31
HMGB4-201ENST00000425537 ERASQ7Z444 233 aa6.85□□□□□ -1.31
HMGB4-201ENST00000425537 ATOH7Q8N100 152 aa6.85□□□□□ -1.31
HMGB4-201ENST00000425537 C18orf15Q96N68 181 aa6.85□□□□□ -1.31
HMGB4-201ENST00000425537 MRPL16Q9NX20 251 aaKnown RBP6.85□□□□□ -1.31
HMGB4-201ENST00000425537 DPM2O94777 84 aa6.84□□□□□ -1.31
HMGB4-201ENST00000425537 PLNP26678 52 aa6.84□□□□□ -1.31
HMGB4-201ENST00000425537 SMAGPQ0VAQ4 97 aa6.84□□□□□ -1.31
HMGB4-201ENST00000425537 LBHQ53QV2 105 aaPredicted RBP6.84□□□□□ -1.31
HMGB4-201ENST00000425537 UFSP1Q6NVU6 142 aa6.84□□□□□ -1.31
HMGB4-201ENST00000425537 CSNK1G2-AS1Q8NCQ2 148 aa6.84□□□□□ -1.31
HMGB4-201ENST00000425537 OVOL2Q9BRP0 275 aa6.84□□□□□ -1.31
HMGB4-201ENST00000425537 WFDC10AQ9H1F0 79 aa6.84□□□□□ -1.31
HMGB4-201ENST00000425537 A0A087WX48 190 aa6.83□□□□□ -1.32
HMGB4-201ENST00000425537 TRBV10-1A0A0K0K1A3 114 aa6.83□□□□□ -1.32
HMGB4-201ENST00000425537 GIG44P09565 113 aaPredicted RBP6.83□□□□□ -1.32
HMGB4-201ENST00000425537 NPSP0C0P6 89 aa6.83□□□□□ -1.32
HMGB4-201ENST00000425537 IGLC3P0DOY3 106 aa6.83□□□□□ -1.32
HMGB4-201ENST00000425537 TIMM17AQ99595 171 aa6.83□□□□□ -1.32
HMGB4-201ENST00000425537 TRGV2A0A075B6R0 118 aa6.82□□□□□ -1.32
HMGB4-201ENST00000425537 IGKCP01834 107 aa6.82□□□□□ -1.32
HMGB4-201ENST00000425537 IGLL1P15814 213 aa6.82□□□□□ -1.32
HMGB4-201ENST00000425537 HNRNPA3P51991 378 aaKnown RBP6.82□□□□□ -1.32
HMGB4-201ENST00000425537 RPL36AP83881 106 aaKnown RBP6.82□□□□□ -1.32
HMGB4-201ENST00000425537 ODF1Q14990 250 aa6.82□□□□□ -1.32
HMGB4-201ENST00000425537 SLC25A34Q6PIV7 304 aa6.82□□□□□ -1.32
HMGB4-201ENST00000425537 RPL36ALQ969Q0 106 aaKnown RBP6.82□□□□□ -1.32
HMGB4-201ENST00000425537 NOP10Q9NPE3 64 aaKnown RBP6.82□□□□□ -1.32
HMGB4-201ENST00000425537 TP53TG1Q9Y2A0 90 aa6.82□□□□□ -1.32
HMGB4-201ENST00000425537 IGHV3-73A0A0B4J1V6 119 aa6.81□□□□□ -1.32
HMGB4-201ENST00000425537 M0R143 59 aa6.81□□□□□ -1.32
HMGB4-201ENST00000425537 CRYBA4P53673 196 aa6.81□□□□□ -1.32
HMGB4-201ENST00000425537 COTL1Q14019 142 aa6.81□□□□□ -1.32
HMGB4-201ENST00000425537 ZMAT4Q9H898 229 aa6.81□□□□□ -1.32
HMGB4-201ENST00000425537 hDV102S1A0JD36 115 aa6.8□□□□□ -1.32
HMGB4-201ENST00000425537 F8VRH5 84 aa6.8□□□□□ -1.32
HMGB4-201ENST00000425537 K7EQD1 137 aa6.8□□□□□ -1.32
HMGB4-201ENST00000425537 TSHBP01222 138 aa6.8□□□□□ -1.32
HMGB4-201ENST00000425537 PMVKQ15126 192 aa6.8□□□□□ -1.32
HMGB4-201ENST00000425537 Q6ZTI0 123 aa6.8□□□□□ -1.32
HMGB4-201ENST00000425537 NEGR1Q7Z3B1 354 aa6.8□□□□□ -1.32
HMGB4-201ENST00000425537 C20orf203Q8NBC4 194 aa6.8□□□□□ -1.32
HMGB4-201ENST00000425537 MRPS16Q9Y3D3 137 aaKnown RBP6.8□□□□□ -1.32
HMGB4-201ENST00000425537 CHTOPQ9Y3Y2 248 aaKnown RBP6.8□□□□□ -1.32
HMGB4-201ENST00000425537 TRBV7-3A0A075B6L6 115 aa6.79□□□□□ -1.32
HMGB4-201ENST00000425537 TRGV4A0A0C4DH28 118 aa6.79□□□□□ -1.32
HMGB4-201ENST00000425537 TRBV6-4A0A1B0GX49 114 aa6.79□□□□□ -1.32
HMGB4-201ENST00000425537 GAGE12BA1L429 117 aa6.79□□□□□ -1.32
HMGB4-201ENST00000425537 LYRM9A8MSI8 78 aa6.79□□□□□ -1.32
HMGB4-201ENST00000425537 GAGE7O76087 117 aa6.79□□□□□ -1.32
HMGB4-201ENST00000425537 PRM2P04554 102 aa6.79□□□□□ -1.32
HMGB4-201ENST00000425537 GAGE12FP0CL80 117 aa6.79□□□□□ -1.32
HMGB4-201ENST00000425537 GAGE12GP0CL81 117 aa6.79□□□□□ -1.32
HMGB4-201ENST00000425537 GAGE12IP0CL82 117 aa6.79□□□□□ -1.32
HMGB4-201ENST00000425537 TMEM97Q5BJF2 176 aa6.79□□□□□ -1.32
HMGB4-201ENST00000425537 DAZ4Q86SG3 579 aaKnown RBP6.79□□□□□ -1.32
HMGB4-201ENST00000425537 NEXN-AS1Q8NBZ9 246 aa6.79□□□□□ -1.32
HMGB4-201ENST00000425537 C14orf144Q96I85 54 aa6.79□□□□□ -1.32
HMGB4-201ENST00000425537 PRADC1Q9BSG0 188 aa6.79□□□□□ -1.32
HMGB4-201ENST00000425537 DAZ3Q9NR90 486 aaKnown RBP6.79□□□□□ -1.32
HMGB4-201ENST00000425537 DKK2Q9UBU2 259 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms