RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 NEXN-AS1Q8NBZ9 246 aa7.91□□□□□ -1.14
HLA-DQB3-203ENST00000425319 DAZAP1Q96EP5 407 aaKnown RBP7.91□□□□□ -1.14
HLA-DQB3-203ENST00000425319 IGHV1-24A0A0C4DH33 117 aa7.9□□□□□ -1.14
HLA-DQB3-203ENST00000425319 PFDN1O60925 122 aa7.9□□□□□ -1.14
HLA-DQB3-203ENST00000425319 CXCL1P09341 107 aa7.9□□□□□ -1.14
HLA-DQB3-203ENST00000425319 GAGE6Q13070 117 aa7.9□□□□□ -1.14
HLA-DQB3-203ENST00000425319 WDR73Q6P4I2 378 aa7.9□□□□□ -1.14
HLA-DQB3-203ENST00000425319 SDIM1Q6ZPB5 146 aa7.9□□□□□ -1.14
HLA-DQB3-203ENST00000425319 MAP1LC3B2A6NCE7 125 aa7.89□□□□□ -1.15
HLA-DQB3-203ENST00000425319 LTAP01374 205 aa7.89□□□□□ -1.15
HLA-DQB3-203ENST00000425319 RBX1P62877 108 aa7.89□□□□□ -1.15
HLA-DQB3-203ENST00000425319 IFITM3Q01628 133 aa7.89□□□□□ -1.15
HLA-DQB3-203ENST00000425319 REG3AQ06141 175 aa7.89□□□□□ -1.15
HLA-DQB3-203ENST00000425319 MAP1LC3BQ9GZQ8 125 aa7.89□□□□□ -1.15
HLA-DQB3-203ENST00000425319 PRR34Q9NV39 138 aa7.89□□□□□ -1.15
HLA-DQB3-203ENST00000425319 UBE2L6O14933 153 aa7.88□□□□□ -1.15
HLA-DQB3-203ENST00000425319 SSTP61278 116 aa7.88□□□□□ -1.15
HLA-DQB3-203ENST00000425319 RPL7L1Q6DKI1 246 aaKnown RBP7.88□□□□□ -1.15
HLA-DQB3-203ENST00000425319 PRR27Q6MZM9 219 aa7.88□□□□□ -1.15
HLA-DQB3-203ENST00000425319 CLPSL2Q6UWE3 100 aa7.88□□□□□ -1.15
HLA-DQB3-203ENST00000425319 BAGE2Q86Y30 109 aa7.88□□□□□ -1.15
HLA-DQB3-203ENST00000425319 AP1S3Q96PC3 154 aa7.88□□□□□ -1.15
HLA-DQB3-203ENST00000425319 VAX2Q9UIW0 290 aa7.88□□□□□ -1.15
HLA-DQB3-203ENST00000425319 PKIGQ9Y2B9 76 aa7.88□□□□□ -1.15
HLA-DQB3-203ENST00000425319 DNAH8Q96JB1 4490 aa7.88□□□□□ -1.15
HLA-DQB3-203ENST00000425319 FXYD6-FXYD2A0A087WZ82 144 aa7.87□□□□□ -1.15
HLA-DQB3-203ENST00000425319 OR5AL1P0C617 328 aa7.87□□□□□ -1.15
HLA-DQB3-203ENST00000425319 SULT1A2P50226 295 aa7.87□□□□□ -1.15
HLA-DQB3-203ENST00000425319 CNBPP62633 177 aaKnown RBP7.87□□□□□ -1.15
HLA-DQB3-203ENST00000425319 ALG5Q9Y673 324 aa7.87□□□□□ -1.15
HLA-DQB3-203ENST00000425319 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.87□□□□□ -1.15
HLA-DQB3-203ENST00000425319 XKRY2A2RUG3 117 aa7.86□□□□□ -1.15
HLA-DQB3-203ENST00000425319 GIPP09681 153 aaPredicted RBP7.86□□□□□ -1.15
HLA-DQB3-203ENST00000425319 ZNF726P1Q15940 193 aa7.86□□□□□ -1.15
HLA-DQB3-203ENST00000425319 IQCJQ1A5X6 159 aa7.86□□□□□ -1.15
HLA-DQB3-203ENST00000425319 OR10AG1Q8NH19 301 aa7.86□□□□□ -1.15
HLA-DQB3-203ENST00000425319 TMEM243Q9BU79 118 aa7.86□□□□□ -1.15
HLA-DQB3-203ENST00000425319 IGLV10-54A0A075B6I4 117 aa7.85□□□□□ -1.15
HLA-DQB3-203ENST00000425319 A0A1B0GUV1 79 aa7.85□□□□□ -1.15
HLA-DQB3-203ENST00000425319 SNAI2O43623 268 aa7.85□□□□□ -1.15
HLA-DQB3-203ENST00000425319 MGPP08493 103 aa7.85□□□□□ -1.15
HLA-DQB3-203ENST00000425319 RPS20P60866 119 aaKnown RBP7.85□□□□□ -1.15
HLA-DQB3-203ENST00000425319 GTSF1Q8WW33 167 aa7.85□□□□□ -1.15
HLA-DQB3-203ENST00000425319 SSBP4Q9BWG4 385 aaPredicted RBP7.85□□□□□ -1.15
HLA-DQB3-203ENST00000425319 A0A087WYN8 130 aa7.84□□□□□ -1.15
HLA-DQB3-203ENST00000425319 PAGE4O60829 102 aa7.84□□□□□ -1.15
HLA-DQB3-203ENST00000425319 HNRNPA3P51991 378 aaKnown RBP7.84□□□□□ -1.15
HLA-DQB3-203ENST00000425319 NTM-AS1Q6ZSK4 140 aa7.84□□□□□ -1.15
HLA-DQB3-203ENST00000425319 MUC21A0A0G2JKD1 596 aa7.83□□□□□ -1.16
HLA-DQB3-203ENST00000425319 MUC21A0A140T8X8 626 aa7.83□□□□□ -1.16
HLA-DQB3-203ENST00000425319 RAB5CP51148 216 aa7.83□□□□□ -1.16
HLA-DQB3-203ENST00000425319 CACNG7P62955 275 aa7.83□□□□□ -1.16
HLA-DQB3-203ENST00000425319 CIRBPQ14011 172 aaKnown RBP7.83□□□□□ -1.16
HLA-DQB3-203ENST00000425319 REG3GQ6UW15 175 aa7.83□□□□□ -1.16
HLA-DQB3-203ENST00000425319 TMUB2Q71RG4 321 aa7.83□□□□□ -1.16
HLA-DQB3-203ENST00000425319 SFT2D1Q8WV19 159 aa7.83□□□□□ -1.16
HLA-DQB3-203ENST00000425319 TPPP3Q9BW30 176 aa7.83□□□□□ -1.16
HLA-DQB3-203ENST00000425319 LINC00474Q9P2X8 69 aa7.83□□□□□ -1.16
HLA-DQB3-203ENST00000425319 UMAD1C9J7I0 102 aa7.82□□□□□ -1.16
HLA-DQB3-203ENST00000425319 F2Z2F3 143 aa7.82□□□□□ -1.16
HLA-DQB3-203ENST00000425319 TRGC1P0CF51 173 aa7.82□□□□□ -1.16
HLA-DQB3-203ENST00000425319 RPS10P46783 165 aaKnown RBP7.82□□□□□ -1.16
HLA-DQB3-203ENST00000425319 COTL1Q14019 142 aa7.82□□□□□ -1.16
HLA-DQB3-203ENST00000425319 TEX46H3BTG2 121 aa7.81□□□□□ -1.16
HLA-DQB3-203ENST00000425319 NDUFS6O75380 124 aaKnown RBP7.81□□□□□ -1.16
HLA-DQB3-203ENST00000425319 EIF5AP63241 154 aaKnown RBP7.81□□□□□ -1.16
HLA-DQB3-203ENST00000425319 RGS21Q2M5E4 152 aa7.81□□□□□ -1.16
HLA-DQB3-203ENST00000425319 MAJINQ3KP22 176 aa7.81□□□□□ -1.16
HLA-DQB3-203ENST00000425319 AMMECR1LQ6DCA0 310 aa7.81□□□□□ -1.16
HLA-DQB3-203ENST00000425319 RASL11AQ6T310 242 aa7.81□□□□□ -1.16
HLA-DQB3-203ENST00000425319 NIT2Q9NQR4 276 aa7.81□□□□□ -1.16
HLA-DQB3-203ENST00000425319 BIN3Q9NQY0 253 aa7.81□□□□□ -1.16
HLA-DQB3-203ENST00000425319 PLAC8Q9NZF1 115 aa7.81□□□□□ -1.16
HLA-DQB3-203ENST00000425319 M0QY20 66 aa7.8□□□□□ -1.16
HLA-DQB3-203ENST00000425319 MT1HL1P0DM35 61 aa7.8□□□□□ -1.16
HLA-DQB3-203ENST00000425319 AMTP48728 403 aa7.8□□□□□ -1.16
HLA-DQB3-203ENST00000425319 NKX2-5P52952 324 aaPredicted RBP7.8□□□□□ -1.16
HLA-DQB3-203ENST00000425319 KRTAP26-1Q6PEX3 210 aa7.8□□□□□ -1.16
HLA-DQB3-203ENST00000425319 KCNRGQ8N5I3 272 aa7.8□□□□□ -1.16
HLA-DQB3-203ENST00000425319 FER1L6-AS1Q8NA97 138 aa7.8□□□□□ -1.16
HLA-DQB3-203ENST00000425319 SPACA4Q8TDM5 124 aa7.8□□□□□ -1.16
HLA-DQB3-203ENST00000425319 PGLYRP4Q96LB8 373 aa7.8□□□□□ -1.16
HLA-DQB3-203ENST00000425319 PHOX2AO14813 284 aa7.79□□□□□ -1.16
HLA-DQB3-203ENST00000425319 COX6A2Q02221 97 aa7.79□□□□□ -1.16
HLA-DQB3-203ENST00000425319 Q5BKY6 102 aa7.79□□□□□ -1.16
HLA-DQB3-203ENST00000425319 SMIM15Q7Z3B0 74 aa7.79□□□□□ -1.16
HLA-DQB3-203ENST00000425319 C20orf203Q8NBC4 194 aa7.79□□□□□ -1.16
HLA-DQB3-203ENST00000425319 FAM213BQ8TBF2 198 aa7.79□□□□□ -1.16
HLA-DQB3-203ENST00000425319 LINC01600Q96MT4 127 aa7.79□□□□□ -1.16
HLA-DQB3-203ENST00000425319 MLST8Q9BVC4 326 aa7.79□□□□□ -1.16
HLA-DQB3-203ENST00000425319 SCO2A0A1W2PP80 73 aa7.78□□□□□ -1.16
HLA-DQB3-203ENST00000425319 GAGE12HA6NDE8 117 aa7.78□□□□□ -1.16
HLA-DQB3-203ENST00000425319 PANO1I0J062 215 aa7.78□□□□□ -1.16
HLA-DQB3-203ENST00000425319 ARPC5O15511 151 aa7.78□□□□□ -1.16
HLA-DQB3-203ENST00000425319 H2AFB1P0C5Y9 115 aa7.78□□□□□ -1.16
HLA-DQB3-203ENST00000425319 SUMO4Q6EEV6 95 aa7.78□□□□□ -1.16
HLA-DQB3-203ENST00000425319 SPINK6Q6UWN8 80 aa7.78□□□□□ -1.16
HLA-DQB3-203ENST00000425319 STPG4Q8N801 248 aa7.78□□□□□ -1.16
HLA-DQB3-203ENST00000425319 OR2D3Q8NGH3 330 aa7.78□□□□□ -1.16
HLA-DQB3-203ENST00000425319 MBD3L1Q8WWY6 194 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms