RNA–Protein interactions for RNA: ENST00000424417.2

SOX9-AS1-203, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 576 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-203ENST00000424417 DERL1Q9BUN8 251 aa5.34□□□□□ -1.55
SOX9-AS1-203ENST00000424417 GFRA4Q9GZZ7 299 aa5.34□□□□□ -1.55
SOX9-AS1-203ENST00000424417 TMEM167BQ9NRX6 74 aa5.34□□□□□ -1.55
SOX9-AS1-203ENST00000424417 TRBV25-1A0A075B6N4 114 aa5.33□□□□□ -1.56
SOX9-AS1-203ENST00000424417 TRBV6-1A0A0K0K1D8 114 aa5.33□□□□□ -1.56
SOX9-AS1-203ENST00000424417 MUC21A0A140T8X8 626 aa5.33□□□□□ -1.56
SOX9-AS1-203ENST00000424417 A0A1W2PRE2 83 aa5.33□□□□□ -1.56
SOX9-AS1-203ENST00000424417 CXorf1O96002 111 aa5.33□□□□□ -1.56
SOX9-AS1-203ENST00000424417 MZT2BQ6NZ67 158 aa5.33□□□□□ -1.56
SOX9-AS1-203ENST00000424417 REG3GQ6UW15 175 aa5.33□□□□□ -1.56
SOX9-AS1-203ENST00000424417 STPG4Q8N801 248 aa5.33□□□□□ -1.56
SOX9-AS1-203ENST00000424417 C15orf56Q8N910 161 aa5.33□□□□□ -1.56
SOX9-AS1-203ENST00000424417 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.33□□□□□ -1.56
SOX9-AS1-203ENST00000424417 C20orf203Q8NBC4 194 aa5.33□□□□□ -1.56
SOX9-AS1-203ENST00000424417 PRSS3P2Q8NHM4 247 aa5.33□□□□□ -1.56
SOX9-AS1-203ENST00000424417 ENKURQ8TC29 256 aa5.33□□□□□ -1.56
SOX9-AS1-203ENST00000424417 CCDC32Q9BV29 185 aa5.33□□□□□ -1.56
SOX9-AS1-203ENST00000424417 IGLV4-60A0A075B6I1 120 aa5.32□□□□□ -1.56
SOX9-AS1-203ENST00000424417 ATP6V0CP27449 155 aa5.32□□□□□ -1.56
SOX9-AS1-203ENST00000424417 ZNF674Q2M3X9 581 aa5.32□□□□□ -1.56
SOX9-AS1-203ENST00000424417 HIGD2BQ4VC39 106 aa5.32□□□□□ -1.56
SOX9-AS1-203ENST00000424417 SPINK6Q6UWN8 80 aa5.32□□□□□ -1.56
SOX9-AS1-203ENST00000424417 VAX2Q9UIW0 290 aa5.32□□□□□ -1.56
SOX9-AS1-203ENST00000424417 IGHV1-24A0A0C4DH33 117 aa5.31□□□□□ -1.56
SOX9-AS1-203ENST00000424417 FAM74A7A6NL05 159 aa5.31□□□□□ -1.56
SOX9-AS1-203ENST00000424417 F5H697 171 aa5.31□□□□□ -1.56
SOX9-AS1-203ENST00000424417 SSNA1O43805 119 aa5.31□□□□□ -1.56
SOX9-AS1-203ENST00000424417 NDUFS6O75380 124 aaKnown RBP5.31□□□□□ -1.56
SOX9-AS1-203ENST00000424417 SSTP61278 116 aa5.31□□□□□ -1.56
SOX9-AS1-203ENST00000424417 ZNF726P1Q15940 193 aa5.31□□□□□ -1.56
SOX9-AS1-203ENST00000424417 IQCJQ1A5X6 159 aa5.31□□□□□ -1.56
SOX9-AS1-203ENST00000424417 TMEM97Q5BJF2 176 aa5.31□□□□□ -1.56
SOX9-AS1-203ENST00000424417 COX8CQ7Z4L0 72 aa5.31□□□□□ -1.56
SOX9-AS1-203ENST00000424417 PSMG3Q9BT73 122 aaPredicted RBP5.31□□□□□ -1.56
SOX9-AS1-203ENST00000424417 ACTR3CQ9C0K3 210 aaPredicted RBP5.31□□□□□ -1.56
SOX9-AS1-203ENST00000424417 A0A096LNI7 61 aa5.3□□□□□ -1.56
SOX9-AS1-203ENST00000424417 TRAV8-4A0A0B4J246 113 aa5.3□□□□□ -1.56
SOX9-AS1-203ENST00000424417 INMT-MINDY4F8WBC2 141 aa5.3□□□□□ -1.56
SOX9-AS1-203ENST00000424417 P01737 135 aa5.3□□□□□ -1.56
SOX9-AS1-203ENST00000424417 MBP02144 154 aa5.3□□□□□ -1.56
SOX9-AS1-203ENST00000424417 RPS10P46783 165 aaKnown RBP5.3□□□□□ -1.56
SOX9-AS1-203ENST00000424417 UBE2G1P62253 170 aa5.3□□□□□ -1.56
SOX9-AS1-203ENST00000424417 INO80EQ8NBZ0 244 aaPredicted RBP5.3□□□□□ -1.56
SOX9-AS1-203ENST00000424417 HIST1H2BAQ96A08 127 aa5.3□□□□□ -1.56
SOX9-AS1-203ENST00000424417 ZFP30Q9Y2G7 519 aa5.3□□□□□ -1.56
SOX9-AS1-203ENST00000424417 IGKV3OR2-268A0A0C4DH90 116 aa5.29□□□□□ -1.56
SOX9-AS1-203ENST00000424417 GAGE12HA6NDE8 117 aa5.29□□□□□ -1.56
SOX9-AS1-203ENST00000424417 LTAP01374 205 aa5.29□□□□□ -1.56
SOX9-AS1-203ENST00000424417 SRSF9Q13242 221 aaKnown RBP eCLIP5.29□□□□□ -1.56
SOX9-AS1-203ENST00000424417 SPANXN1Q5VSR9 72 aa5.29□□□□□ -1.56
SOX9-AS1-203ENST00000424417 FMC1Q96HJ9 113 aa5.29□□□□□ -1.56
SOX9-AS1-203ENST00000424417 AQP10Q96PS8 301 aa5.29□□□□□ -1.56
SOX9-AS1-203ENST00000424417 ZNF471Q9BX82 626 aaPredicted RBP5.29□□□□□ -1.56
SOX9-AS1-203ENST00000424417 H7C1H1 209 aa5.28□□□□□ -1.56
SOX9-AS1-203ENST00000424417 SNAI2O43623 268 aa5.28□□□□□ -1.56
SOX9-AS1-203ENST00000424417 MGPP08493 103 aa5.28□□□□□ -1.56
SOX9-AS1-203ENST00000424417 GZMBP10144 247 aa5.28□□□□□ -1.56
SOX9-AS1-203ENST00000424417 SULT1A2P50226 295 aa5.28□□□□□ -1.56
SOX9-AS1-203ENST00000424417 SERF2P84101 59 aa5.28□□□□□ -1.56
SOX9-AS1-203ENST00000424417 TMEM243Q9BU79 118 aa5.28□□□□□ -1.56
SOX9-AS1-203ENST00000424417 TNFSF18Q9UNG2 199 aa5.28□□□□□ -1.56
SOX9-AS1-203ENST00000424417 CTXND1A0A1B0GTU2 59 aa5.27□□□□□ -1.57
SOX9-AS1-203ENST00000424417 A0A1B0GUV1 79 aa5.27□□□□□ -1.57
SOX9-AS1-203ENST00000424417 A6NHS1 94 aa5.27□□□□□ -1.57
SOX9-AS1-203ENST00000424417 SMIM17P0DL12 118 aa5.27□□□□□ -1.57
SOX9-AS1-203ENST00000424417 NKX2-5P52952 324 aaPredicted RBP5.27□□□□□ -1.57
SOX9-AS1-203ENST00000424417 SUMO4Q6EEV6 95 aa5.27□□□□□ -1.57
SOX9-AS1-203ENST00000424417 AP1S3Q96PC3 154 aa5.27□□□□□ -1.57
SOX9-AS1-203ENST00000424417 KRTAP9-6A0A140TA67 174 aa5.26□□□□□ -1.57
SOX9-AS1-203ENST00000424417 M0QY20 66 aa5.26□□□□□ -1.57
SOX9-AS1-203ENST00000424417 AKR1C3P42330 323 aa5.26□□□□□ -1.57
SOX9-AS1-203ENST00000424417 IFITM3Q01628 133 aa5.26□□□□□ -1.57
SOX9-AS1-203ENST00000424417 CFAP161Q6P656 301 aa5.26□□□□□ -1.57
SOX9-AS1-203ENST00000424417 Q6ZRP5 223 aa5.26□□□□□ -1.57
SOX9-AS1-203ENST00000424417 MARVELD1Q9BSK0 173 aa5.26□□□□□ -1.57
SOX9-AS1-203ENST00000424417 SSBP4Q9BWG4 385 aaPredicted RBP5.26□□□□□ -1.57
SOX9-AS1-203ENST00000424417 NKX6-2Q9C056 277 aaPredicted RBP5.26□□□□□ -1.57
SOX9-AS1-203ENST00000424417 GVQW2A0A096LPI5 108 aaPredicted RBP5.25□□□□□ -1.57
SOX9-AS1-203ENST00000424417 UBE2L6O14933 153 aa5.25□□□□□ -1.57
SOX9-AS1-203ENST00000424417 UPK1BO75841 260 aa5.25□□□□□ -1.57
SOX9-AS1-203ENST00000424417 CXCL1P09341 107 aa5.25□□□□□ -1.57
SOX9-AS1-203ENST00000424417 OR5AL1P0C617 328 aa5.25□□□□□ -1.57
SOX9-AS1-203ENST00000424417 CST9LP1Q5W188 147 aa5.25□□□□□ -1.57
SOX9-AS1-203ENST00000424417 RPL7L1Q6DKI1 246 aaKnown RBP5.25□□□□□ -1.57
SOX9-AS1-203ENST00000424417 CHCHD10Q8WYQ3 142 aaPredicted RBP5.25□□□□□ -1.57
SOX9-AS1-203ENST00000424417 LINC00526Q96FQ7 95 aa5.25□□□□□ -1.57
SOX9-AS1-203ENST00000424417 MAP1LC3B2A6NCE7 125 aa5.24□□□□□ -1.57
SOX9-AS1-203ENST00000424417 FAM231BA6NCW3 169 aa5.24□□□□□ -1.57
SOX9-AS1-203ENST00000424417 STOML3Q8TAV4 291 aa5.24□□□□□ -1.57
SOX9-AS1-203ENST00000424417 TPPP3Q9BW30 176 aa5.24□□□□□ -1.57
SOX9-AS1-203ENST00000424417 MAP1LC3BQ9GZQ8 125 aa5.24□□□□□ -1.57
SOX9-AS1-203ENST00000424417 SCO2A0A1W2PP80 73 aa5.23□□□□□ -1.57
SOX9-AS1-203ENST00000424417 AMTP48728 403 aa5.23□□□□□ -1.57
SOX9-AS1-203ENST00000424417 FOXI1Q12951 378 aa5.23□□□□□ -1.57
SOX9-AS1-203ENST00000424417 RASL11AQ6T310 242 aa5.23□□□□□ -1.57
SOX9-AS1-203ENST00000424417 PRR26Q8N8Z3 221 aa5.23□□□□□ -1.57
SOX9-AS1-203ENST00000424417 PGLYRP4Q96LB8 373 aa5.23□□□□□ -1.57
SOX9-AS1-203ENST00000424417 CARD19Q96LW7 228 aa5.23□□□□□ -1.57
SOX9-AS1-203ENST00000424417 MLST8Q9BVC4 326 aa5.23□□□□□ -1.57
SOX9-AS1-203ENST00000424417 LINC00474Q9P2X8 69 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms