RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 RBM12B-AS1Q9P1G2 102 aa3.79□□□□□ -1.8
SCG2-202ENST00000421386 SPRR3Q9UBC9 169 aa3.79□□□□□ -1.8
SCG2-202ENST00000421386 LENEPQ9Y5L5 61 aa3.79□□□□□ -1.8
SCG2-202ENST00000421386 JMJD7-PLA2G4BH0Y9G9 81 aa3.78□□□□□ -1.8
SCG2-202ENST00000421386 H0YGX0 51 aa3.78□□□□□ -1.8
SCG2-202ENST00000421386 MRPL33O75394 65 aaKnown RBP3.78□□□□□ -1.8
SCG2-202ENST00000421386 RNASE4P34096 147 aaKnown RBP3.78□□□□□ -1.8
SCG2-202ENST00000421386 POLR2KP53803 58 aaKnown RBP3.78□□□□□ -1.8
SCG2-202ENST00000421386 B3GALT5-AS1P59052 145 aa3.78□□□□□ -1.8
SCG2-202ENST00000421386 CIRBPQ14011 172 aaKnown RBP3.78□□□□□ -1.8
SCG2-202ENST00000421386 C17orf58Q2M2W7 97 aa3.78□□□□□ -1.8
SCG2-202ENST00000421386 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.8
SCG2-202ENST00000421386 PATE1Q8WXA2 126 aa3.78□□□□□ -1.8
SCG2-202ENST00000421386 UBE2E2Q96LR5 201 aa3.78□□□□□ -1.8
SCG2-202ENST00000421386 DEFB118Q96PH6 123 aa3.78□□□□□ -1.8
SCG2-202ENST00000421386 KLK15Q9H2R5 256 aa3.78□□□□□ -1.8
SCG2-202ENST00000421386 ZNF407Q9C0G0 2248 aa3.78□□□□□ -1.8
SCG2-202ENST00000421386 ABCA7Q8IZY2 2146 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 IGKV3D-20A0A0C4DH25 116 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 SRRM5B3KS81 715 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 C10orf142B7Z368 130 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 E7EQL1 145 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 LHBP01229 141 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 IGKV1-17P01599 117 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 IGKV1-16P04430 117 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 IGHV3-30-3P0DP02 117 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 CD28P10747 220 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 MAGEA5P43359 124 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 APOC4P55056 127 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 UBE2BP63146 152 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 CCL14Q16627 93 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 PHF5AQ7RTV0 110 aaKnown RBP3.77□□□□□ -1.81
SCG2-202ENST00000421386 C6orf223Q8N319 242 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 LY6G5BQ8NDX9 201 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 HES7Q9BYE0 225 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 C11orf68Q9H3H3 251 aaKnown RBP3.77□□□□□ -1.81
SCG2-202ENST00000421386 NDUFA12Q9UI09 145 aa3.77□□□□□ -1.81
SCG2-202ENST00000421386 ESPL1Q14674 2120 aa3.76□□□□□ -1.81
SCG2-202ENST00000421386 TRAV23DV6A0A075B6W5 121 aa3.76□□□□□ -1.81
SCG2-202ENST00000421386 IGKV2-40A0A087WW87 121 aaPredicted RBP3.76□□□□□ -1.81
SCG2-202ENST00000421386 TRBV7-4A0A0J9YYF1 115 aa3.76□□□□□ -1.81
SCG2-202ENST00000421386 I3L2K1 104 aa3.76□□□□□ -1.81
SCG2-202ENST00000421386 UBE2L6O14933 153 aa3.76□□□□□ -1.81
SCG2-202ENST00000421386 NDUFA1O15239 70 aa3.76□□□□□ -1.81
SCG2-202ENST00000421386 IGKV2D-40P01614 121 aaPredicted RBP3.76□□□□□ -1.81
SCG2-202ENST00000421386 IGLV2-23P01705 113 aa3.76□□□□□ -1.81
SCG2-202ENST00000421386 VPREB1P12018 145 aa3.76□□□□□ -1.81
SCG2-202ENST00000421386 RPL27AP46776 148 aaKnown RBP3.76□□□□□ -1.81
SCG2-202ENST00000421386 HIST2H2BCQ6DN03 193 aa3.76□□□□□ -1.81
SCG2-202ENST00000421386 HIST2H2BDQ6DRA6 164 aa3.76□□□□□ -1.81
SCG2-202ENST00000421386 Q6ZVQ6 151 aa3.76□□□□□ -1.81
SCG2-202ENST00000421386 GPHB5Q86YW7 130 aa3.76□□□□□ -1.81
SCG2-202ENST00000421386 UBL5Q9BZL1 73 aa3.76□□□□□ -1.81
SCG2-202ENST00000421386 KNTC1P50748 2209 aa3.75□□□□□ -1.81
SCG2-202ENST00000421386 DIDO1Q9BTC0 2240 aaKnown RBP3.75□□□□□ -1.81
SCG2-202ENST00000421386 M0R378 163 aa3.75□□□□□ -1.81
SCG2-202ENST00000421386 IGLV3-19P01714 112 aa3.75□□□□□ -1.81
SCG2-202ENST00000421386 LINC00588Q9Y4M8 146 aa3.75□□□□□ -1.81
SCG2-202ENST00000421386 PHLDA3Q9Y5J5 127 aa3.75□□□□□ -1.81
SCG2-202ENST00000421386 MED12Q93074 2177 aa3.75□□□□□ -1.81
SCG2-202ENST00000421386 IGKV1D-17A0A075B6S4 117 aa3.74□□□□□ -1.81
SCG2-202ENST00000421386 SPTY2D1-AS1A0A0U1RR47 76 aa3.74□□□□□ -1.81
SCG2-202ENST00000421386 F6UB75 175 aa3.74□□□□□ -1.81
SCG2-202ENST00000421386 DSCAMO60469 2012 aa3.74□□□□□ -1.81
SCG2-202ENST00000421386 CXCL6P80162 114 aa3.74□□□□□ -1.81
SCG2-202ENST00000421386 KHDC1LQ5JSQ8 128 aa3.74□□□□□ -1.81
SCG2-202ENST00000421386 C9orf47Q6ZRZ4 202 aa3.74□□□□□ -1.81
SCG2-202ENST00000421386 C11orf44Q8N8P7 122 aa3.74□□□□□ -1.81
SCG2-202ENST00000421386 MPLKIPQ8TAP9 179 aa3.74□□□□□ -1.81
SCG2-202ENST00000421386 LINC01560Q8TB33 94 aa3.74□□□□□ -1.81
SCG2-202ENST00000421386 LINC00308Q8TCZ7 52 aa3.74□□□□□ -1.81
SCG2-202ENST00000421386 RMI2Q96E14 147 aa3.74□□□□□ -1.81
SCG2-202ENST00000421386 C14orf132Q9NPU4 83 aa3.74□□□□□ -1.81
SCG2-202ENST00000421386 FER1L5A0AVI2 2057 aa3.74□□□□□ -1.81
SCG2-202ENST00000421386 RTTNQ86VV8 2226 aa3.73□□□□□ -1.81
SCG2-202ENST00000421386 TRAV12-3A0A0B4J271 114 aa3.73□□□□□ -1.81
SCG2-202ENST00000421386 IGHV3-20A0A0C4DH32 117 aa3.73□□□□□ -1.81
SCG2-202ENST00000421386 IGHV3-48P01763 117 aa3.73□□□□□ -1.81
SCG2-202ENST00000421386 RFPL3SP0C7P2 107 aa3.73□□□□□ -1.81
SCG2-202ENST00000421386 ECSCRQ19T08 205 aa3.73□□□□□ -1.81
SCG2-202ENST00000421386 MRGPRG-AS1Q2M3A8 158 aa3.73□□□□□ -1.81
SCG2-202ENST00000421386 C15orf32Q32M92 178 aa3.73□□□□□ -1.81
SCG2-202ENST00000421386 RUSC1-AS1Q66K80 236 aa3.73□□□□□ -1.81
SCG2-202ENST00000421386 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.73□□□□□ -1.81
SCG2-202ENST00000421386 Q8TAT8 98 aa3.73□□□□□ -1.81
SCG2-202ENST00000421386 C11orf45Q8TAV5 145 aa3.73□□□□□ -1.81
SCG2-202ENST00000421386 RPL39LQ96EH5 51 aaKnown RBP3.73□□□□□ -1.81
SCG2-202ENST00000421386 LINC00167Q96N53 147 aa3.73□□□□□ -1.81
SCG2-202ENST00000421386 RNF5Q99942 180 aa3.73□□□□□ -1.81
SCG2-202ENST00000421386 BPESC1Q9GZL8 116 aa3.73□□□□□ -1.81
SCG2-202ENST00000421386 INTS1Q8N201 2190 aaKnown RBP3.73□□□□□ -1.81
SCG2-202ENST00000421386 NOTCH4Q99466 2003 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 IGLV4-3A0A075B6K6 122 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 IGLV5-45A0A087WSX0 123 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 hDV103S1A0JD37 113 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 PRYO14603 147 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 CTSGP08311 255 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 CCL3P10147 92 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 FUSP35637 526 aaKnown RBP eCLIP3.72□□□□□ -1.81
SCG2-202ENST00000421386 FAM229BQ4G0N7 80 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms