RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 LINC00614P0C842 121 aa10.08□□□□□ -0.8
SHMT1P1-201ENST00000419974 HOXA5P20719 270 aa10.08□□□□□ -0.8
SHMT1P1-201ENST00000419974 SUMO2P61956 95 aaKnown RBP10.08□□□□□ -0.8
SHMT1P1-201ENST00000419974 FHL2Q14192 279 aa10.08□□□□□ -0.8
SHMT1P1-201ENST00000419974 SMKR1H3BMG3 65 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 TCAPO15273 167 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 NCR2O95944 276 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 LINC00310P59036 64 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 Q6ZSN1 163 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 BAGE3Q86Y29 109 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 Q8N8P6 123 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 ST20Q9HBF5 79 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 RETNQ9HD89 108 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 TMA7Q9Y2S6 64 aaKnown RBP10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 TENM3Q9P273 2699 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 ATP5G1P05496 136 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 DEFB130BP0DP73 79 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 DEFB130AP0DP74 79 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 PMCHP20382 165 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 NDUFA6P56556 154 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 DAD1P61803 113 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 NIT1Q86X76 327 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 URB1-AS1Q96HZ7 61 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 CELA1Q9UNI1 258 aa10.07□□□□□ -0.8
SHMT1P1-201ENST00000419974 K7EQD1 137 aa10.06□□□□□ -0.8
SHMT1P1-201ENST00000419974 VCYO14598 125 aa10.06□□□□□ -0.8
SHMT1P1-201ENST00000419974 RHOHQ15669 191 aa10.06□□□□□ -0.8
SHMT1P1-201ENST00000419974 SLC25A29Q8N8R3 303 aa10.06□□□□□ -0.8
SHMT1P1-201ENST00000419974 PRSS3P2Q8NHM4 247 aa10.06□□□□□ -0.8
SHMT1P1-201ENST00000419974 RPL39LQ96EH5 51 aaKnown RBP10.06□□□□□ -0.8
SHMT1P1-201ENST00000419974 TMEM70Q9BUB7 260 aa10.06□□□□□ -0.8
SHMT1P1-201ENST00000419974 SMIM2Q9BVW6 85 aa10.06□□□□□ -0.8
SHMT1P1-201ENST00000419974 PRO0255Q9UI72 69 aa10.06□□□□□ -0.8
SHMT1P1-201ENST00000419974 H3BNG1 76 aa10.05□□□□□ -0.8
SHMT1P1-201ENST00000419974 DEFB4AO15263 64 aa10.05□□□□□ -0.8
SHMT1P1-201ENST00000419974 SERF1AO75920 110 aa10.05□□□□□ -0.8
SHMT1P1-201ENST00000419974 C12orf74Q32Q52 190 aa10.05□□□□□ -0.8
SHMT1P1-201ENST00000419974 NEXN-AS1Q8NBZ9 246 aa10.05□□□□□ -0.8
SHMT1P1-201ENST00000419974 WWC2-AS2Q96NR7 200 aa10.05□□□□□ -0.8
SHMT1P1-201ENST00000419974 AP5S1Q9NUS5 200 aa10.05□□□□□ -0.8
SHMT1P1-201ENST00000419974 HHLA3Q9XRX5 114 aa10.05□□□□□ -0.8
SHMT1P1-201ENST00000419974 NACAE9PAV3 2078 aa10.04□□□□□ -0.8
SHMT1P1-201ENST00000419974 TRBV7-3A0A075B6L6 115 aa10.04□□□□□ -0.8
SHMT1P1-201ENST00000419974 IGHV3-73A0A0B4J1V6 119 aa10.04□□□□□ -0.8
SHMT1P1-201ENST00000419974 TRGV4A0A0C4DH28 118 aa10.04□□□□□ -0.8
SHMT1P1-201ENST00000419974 SDHAF1A6NFY7 115 aa10.04□□□□□ -0.8
SHMT1P1-201ENST00000419974 LINC00694P0DN24 101 aa10.04□□□□□ -0.8
SHMT1P1-201ENST00000419974 IFI27P40305 119 aaPredicted RBP10.04□□□□□ -0.8
SHMT1P1-201ENST00000419974 CRYBA4P53673 196 aa10.04□□□□□ -0.8
SHMT1P1-201ENST00000419974 SNRPEP62304 92 aaKnown RBP10.04□□□□□ -0.8
SHMT1P1-201ENST00000419974 IQCJQ1A5X6 159 aa10.04□□□□□ -0.8
SHMT1P1-201ENST00000419974 HIST3H2BBQ8N257 126 aa10.04□□□□□ -0.8
SHMT1P1-201ENST00000419974 PRADC1Q9BSG0 188 aa10.04□□□□□ -0.8
SHMT1P1-201ENST00000419974 A0A0J9YWU9 116 aa10.03□□□□□ -0.8
SHMT1P1-201ENST00000419974 LINC01549A6NIU2 74 aa10.03□□□□□ -0.8
SHMT1P1-201ENST00000419974 G0S2P27469 103 aa10.03□□□□□ -0.8
SHMT1P1-201ENST00000419974 RPL36AP83881 106 aaKnown RBP10.03□□□□□ -0.8
SHMT1P1-201ENST00000419974 FA2HQ7L5A8 372 aa10.03□□□□□ -0.8
SHMT1P1-201ENST00000419974 DAZ4Q86SG3 579 aaKnown RBP10.03□□□□□ -0.8
SHMT1P1-201ENST00000419974 RPL36ALQ969Q0 106 aaKnown RBP10.03□□□□□ -0.8
SHMT1P1-201ENST00000419974 DAZ3Q9NR90 486 aaKnown RBP10.03□□□□□ -0.8
SHMT1P1-201ENST00000419974 TNFRSF18Q9Y5U5 241 aa10.03□□□□□ -0.8
SHMT1P1-201ENST00000419974 KMT2CQ8NEZ4 4911 aaKnown RBP10.02□□□□□ -0.81
SHMT1P1-201ENST00000419974 I3L3M4 83 aa10.02□□□□□ -0.81
SHMT1P1-201ENST00000419974 NUPR1O60356 82 aa10.02□□□□□ -0.81
SHMT1P1-201ENST00000419974 UBE2D3P61077 147 aa10.02□□□□□ -0.81
SHMT1P1-201ENST00000419974 UBE2D2P62837 147 aa10.02□□□□□ -0.81
SHMT1P1-201ENST00000419974 ORMDL2Q53FV1 153 aa10.02□□□□□ -0.81
SHMT1P1-201ENST00000419974 C11orf45Q8TAV5 145 aa10.02□□□□□ -0.81
SHMT1P1-201ENST00000419974 KIR2DL4Q99706 377 aa10.02□□□□□ -0.81
SHMT1P1-201ENST00000419974 HSBP1O75506 76 aa10.01□□□□□ -0.81
SHMT1P1-201ENST00000419974 STAB2Q8WWQ8 2551 aa10.01□□□□□ -0.81
SHMT1P1-201ENST00000419974 TRAV26-1A0A087WT03 109 aa10□□□□□ -0.81
SHMT1P1-201ENST00000419974 LOC389332A0A1B0GUA5 103 aa10□□□□□ -0.81
SHMT1P1-201ENST00000419974 P0DMU3 169 aa10□□□□□ -0.81
SHMT1P1-201ENST00000419974 FAM231AP0DMU4 169 aa10□□□□□ -0.81
SHMT1P1-201ENST00000419974 FAM231CP0DMU5 169 aa10□□□□□ -0.81
SHMT1P1-201ENST00000419974 LAGE3Q14657 143 aa10□□□□□ -0.81
SHMT1P1-201ENST00000419974 SH2D6Q7Z4S9 175 aa10□□□□□ -0.81
SHMT1P1-201ENST00000419974 GTSF1LQ9H1H1 148 aa10□□□□□ -0.81
SHMT1P1-201ENST00000419974 Q9UF83 564 aa10□□□□□ -0.81
SHMT1P1-201ENST00000419974 IFITM10A6NMD0 228 aa9.99□□□□□ -0.81
SHMT1P1-201ENST00000419974 FCER1GP30273 86 aa9.99□□□□□ -0.81
SHMT1P1-201ENST00000419974 TMEM97Q5BJF2 176 aa9.99□□□□□ -0.81
SHMT1P1-201ENST00000419974 RNASEKQ6P5S7 137 aaKnown RBP9.99□□□□□ -0.81
SHMT1P1-201ENST00000419974 TMEM18Q96B42 140 aa9.99□□□□□ -0.81
SHMT1P1-201ENST00000419974 VSIG2Q96IQ7 327 aa9.99□□□□□ -0.81
SHMT1P1-201ENST00000419974 A0A096LNJ9 63 aa9.98□□□□□ -0.81
SHMT1P1-201ENST00000419974 PAX4O43316 350 aa9.98□□□□□ -0.81
SHMT1P1-201ENST00000419974 ZNRF2Q8NHG8 242 aa9.98□□□□□ -0.81
SHMT1P1-201ENST00000419974 HIST1H2BLQ99880 126 aa9.98□□□□□ -0.81
SHMT1P1-201ENST00000419974 IGHV1-24A0A0C4DH33 117 aa9.97□□□□□ -0.81
SHMT1P1-201ENST00000419974 TSHBP01222 138 aa9.97□□□□□ -0.81
SHMT1P1-201ENST00000419974 HBDP02042 147 aa9.97□□□□□ -0.81
SHMT1P1-201ENST00000419974 S100A2P29034 98 aa9.97□□□□□ -0.81
SHMT1P1-201ENST00000419974 Q6ZTC4 211 aa9.97□□□□□ -0.81
SHMT1P1-201ENST00000419974 NPSP0C0P6 89 aa9.96□□□□□ -0.82
SHMT1P1-201ENST00000419974 LOC105371267A0A1B0GV96 52 aa9.95□□□□□ -0.82
SHMT1P1-201ENST00000419974 F5H768 121 aa9.95□□□□□ -0.82
SHMT1P1-201ENST00000419974 AMTP48728 403 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms