RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 HBDP02042 147 aa4.29□□□□□ -1.72
HMGB3-202ENST00000419110 EMP1P54849 157 aa4.29□□□□□ -1.72
HMGB3-202ENST00000419110 LINC00310P59036 64 aa4.29□□□□□ -1.72
HMGB3-202ENST00000419110 RPL32P62910 135 aaKnown RBP4.29□□□□□ -1.72
HMGB3-202ENST00000419110 CFAP126Q5VTH2 177 aa4.29□□□□□ -1.72
HMGB3-202ENST00000419110 Q6ZTI0 123 aa4.29□□□□□ -1.72
HMGB3-202ENST00000419110 LURAP1LQ8IV03 231 aa4.29□□□□□ -1.72
HMGB3-202ENST00000419110 Q8N8P6 123 aa4.29□□□□□ -1.72
HMGB3-202ENST00000419110 OR11H2Q8NH07 326 aa4.29□□□□□ -1.72
HMGB3-202ENST00000419110 RASL10AQ92737 203 aa4.29□□□□□ -1.72
HMGB3-202ENST00000419110 RPL39LQ96EH5 51 aaKnown RBP4.29□□□□□ -1.72
HMGB3-202ENST00000419110 JPT2Q9H910 190 aa4.29□□□□□ -1.72
HMGB3-202ENST00000419110 KIF25-AS1Q9Y6Z4 181 aa4.29□□□□□ -1.72
HMGB3-202ENST00000419110 X6R8D5 127 aa4.29□□□□□ -1.72
HMGB3-202ENST00000419110 TRRAPQ9Y4A5 3859 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 IGHV3-73A0A0B4J1V6 119 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 IGHV4-28A0A0C4DH34 117 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 GAGE12BA1L429 117 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 PLAC8L1A1L4L8 177 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 GAGE7O76087 117 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 PRM2P04554 102 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 CRYGDP07320 174 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 LINC00614P0C842 121 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 GAGE12FP0CL80 117 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 GAGE12GP0CL81 117 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 GAGE12IP0CL82 117 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 GATA1P15976 413 aaPredicted RBP4.28□□□□□ -1.72
HMGB3-202ENST00000419110 IFI27P40305 119 aaPredicted RBP4.28□□□□□ -1.72
HMGB3-202ENST00000419110 ORMDL2Q53FV1 153 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 KPRPQ5T749 579 aaPredicted RBP4.28□□□□□ -1.72
HMGB3-202ENST00000419110 NIT1Q86X76 327 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 OR10D4PQ8NGN7 298 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 RNF183Q96D59 192 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 KIR2DL4Q99706 377 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 OVOL2Q9BRP0 275 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 C11orf68Q9H3H3 251 aaKnown RBP4.28□□□□□ -1.72
HMGB3-202ENST00000419110 HSPB8Q9UJY1 196 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 NOTCH1P46531 2555 aa4.28□□□□□ -1.72
HMGB3-202ENST00000419110 TRGV4A0A0C4DH28 118 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 TRBV10-1A0A0K0K1A3 114 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 TRBV6-5A0A0K0K1A5 114 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 C20orf202A1L168 122 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 SDHAF1A6NFY7 115 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 IFITM10A6NMD0 228 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 M0QY20 66 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 LEPROTL1O95214 131 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 IGHV3-53P01767 116 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 G0S2P27469 103 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 FCER1GP30273 86 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 LINC00315P59091 139 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 DAD1P61803 113 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 RHOHQ15669 191 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 LINC00612Q8N6U2 182 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 Q8NAQ8 132 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 DNAJC30Q96LL9 226 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 SPATA25Q9BR10 227 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 TMEM70Q9BUB7 260 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 NIT2Q9NQR4 276 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 TNFRSF18Q9Y5U5 241 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 MGAM2Q2M2H8 2515 aa4.27□□□□□ -1.73
HMGB3-202ENST00000419110 PKD1L1Q8TDX9 2849 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 LINC01549A6NIU2 74 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 PRSS47A8MTI9 375 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 GAS8-AS1O95177 125 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 NUDT3O95989 172 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 DEFB130BP0DP73 79 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 DEFB130AP0DP74 79 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 KRTDAPP60985 99 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 RPL36AP83881 106 aaKnown RBP4.26□□□□□ -1.73
HMGB3-202ENST00000419110 LAGE3Q14657 143 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 PMCHL1Q16048 86 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 KRTAP21-3Q3LHN1 58 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 FAM222AQ5U5X8 452 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 UFSP1Q6NVU6 142 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 FAM19A2Q8N3H0 131 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 RPL36ALQ969Q0 106 aaKnown RBP4.26□□□□□ -1.73
HMGB3-202ENST00000419110 URB1-AS1Q96HZ7 61 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 C18orf15Q96N68 181 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 PRADC1Q9BSG0 188 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 RETNQ9HD89 108 aa4.26□□□□□ -1.73
HMGB3-202ENST00000419110 NBEAL1Q6ZS30 2694 aa4.25□□□□□ -1.73
HMGB3-202ENST00000419110 IGLV2-18A0A075B6J9 118 aa4.25□□□□□ -1.73
HMGB3-202ENST00000419110 TRBV27A0A0K0K1C4 114 aa4.25□□□□□ -1.73
HMGB3-202ENST00000419110 LINC01546A6NGU7 62 aa4.25□□□□□ -1.73
HMGB3-202ENST00000419110 I3L3M4 83 aa4.25□□□□□ -1.73
HMGB3-202ENST00000419110 VCYO14598 125 aa4.25□□□□□ -1.73
HMGB3-202ENST00000419110 NUPR1O60356 82 aa4.25□□□□□ -1.73
HMGB3-202ENST00000419110 ATP5LO75964 103 aa4.25□□□□□ -1.73
HMGB3-202ENST00000419110 SPART-AS1P0CW21 52 aa4.25□□□□□ -1.73
HMGB3-202ENST00000419110 BTF3P20290 206 aaKnown RBP4.25□□□□□ -1.73
HMGB3-202ENST00000419110 COTL1Q14019 142 aa4.25□□□□□ -1.73
HMGB3-202ENST00000419110 NEGR1Q7Z3B1 354 aa4.25□□□□□ -1.73
HMGB3-202ENST00000419110 NEXN-AS1Q8NBZ9 246 aa4.25□□□□□ -1.73
HMGB3-202ENST00000419110 ZNF479Q96JC4 524 aa4.25□□□□□ -1.73
HMGB3-202ENST00000419110 MAP1LC3CQ9BXW4 147 aa4.25□□□□□ -1.73
HMGB3-202ENST00000419110 DKK2Q9UBU2 259 aa4.25□□□□□ -1.73
HMGB3-202ENST00000419110 CYSLTR1Q9Y271 337 aa4.25□□□□□ -1.73
HMGB3-202ENST00000419110 TRBV6-4A0A1B0GX49 114 aa4.24□□□□□ -1.73
HMGB3-202ENST00000419110 K7EIL1 84 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 9357.2 ms