RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 DUX5Q96PT3 197 aa11.29□□□□□ -0.6
SEMA3B-203ENST00000419007 TIMM17AQ99595 171 aa11.29□□□□□ -0.6
SEMA3B-203ENST00000419007 CCL19Q99731 98 aa11.29□□□□□ -0.6
SEMA3B-203ENST00000419007 TCL1BO95988 128 aa11.29□□□□□ -0.6
SEMA3B-203ENST00000419007 TRAV2A0A0B4J234 112 aa11.29□□□□□ -0.6
SEMA3B-203ENST00000419007 LYRM7Q5U5X0 104 aa11.29□□□□□ -0.6
SEMA3B-203ENST00000419007 ZNF843Q8N446 348 aa11.29□□□□□ -0.6
SEMA3B-203ENST00000419007 IGHV4-30-2A0A087WSY4 118 aa11.28□□□□□ -0.6
SEMA3B-203ENST00000419007 IGHV3-30P01768 117 aa11.28□□□□□ -0.6
SEMA3B-203ENST00000419007 IGHV3-30-5P0DP03 117 aa11.28□□□□□ -0.6
SEMA3B-203ENST00000419007 ZNF876PQ49A33 203 aa11.28□□□□□ -0.6
SEMA3B-203ENST00000419007 POM121L12Q8N7R1 296 aa11.28□□□□□ -0.6
SEMA3B-203ENST00000419007 ZANQ9Y493 2812 aa11.28□□□□□ -0.6
SEMA3B-203ENST00000419007 MYO9AB2RTY4 2548 aa11.28□□□□□ -0.6
SEMA3B-203ENST00000419007 CSMD2Q7Z408 3487 aa11.28□□□□□ -0.6
SEMA3B-203ENST00000419007 IGHV3-73A0A0B4J1V6 119 aa11.28□□□□□ -0.6
SEMA3B-203ENST00000419007 TRBV27A0A0K0K1C4 114 aa11.28□□□□□ -0.6
SEMA3B-203ENST00000419007 IGHV3-16A0A0C4DH30 117 aa11.27□□□□□ -0.6
SEMA3B-203ENST00000419007 IGLV1-40P01703 118 aa11.27□□□□□ -0.6
SEMA3B-203ENST00000419007 SLC25A29Q8N8R3 303 aa11.27□□□□□ -0.6
SEMA3B-203ENST00000419007 NOTCH2Q04721 2471 aa11.27□□□□□ -0.61
SEMA3B-203ENST00000419007 SCGB1A1P11684 91 aa11.27□□□□□ -0.61
SEMA3B-203ENST00000419007 SNRPD3P62318 126 aaKnown RBP11.27□□□□□ -0.61
SEMA3B-203ENST00000419007 UBE2D3P61077 147 aa11.27□□□□□ -0.61
SEMA3B-203ENST00000419007 UBE2D2P62837 147 aa11.27□□□□□ -0.61
SEMA3B-203ENST00000419007 M0QY20 66 aa11.26□□□□□ -0.61
SEMA3B-203ENST00000419007 LGALS9O00182 355 aa11.26□□□□□ -0.61
SEMA3B-203ENST00000419007 RPL32P62910 135 aaKnown RBP11.26□□□□□ -0.61
SEMA3B-203ENST00000419007 C10orf126Q8N4M7 172 aa11.26□□□□□ -0.61
SEMA3B-203ENST00000419007 PRO1854Q9UHT4 67 aa11.26□□□□□ -0.61
SEMA3B-203ENST00000419007 A4D1N5 150 aa11.26□□□□□ -0.61
SEMA3B-203ENST00000419007 AVPP01185 164 aa11.26□□□□□ -0.61
SEMA3B-203ENST00000419007 C10orf105Q8TEF2 133 aa11.26□□□□□ -0.61
SEMA3B-203ENST00000419007 A0A1B0GV72 72 aa11.26□□□□□ -0.61
SEMA3B-203ENST00000419007 MSMBP08118 114 aa11.26□□□□□ -0.61
SEMA3B-203ENST00000419007 Q1RN00 199 aa11.26□□□□□ -0.61
SEMA3B-203ENST00000419007 A0A0J9YXV3 536 aa11.25□□□□□ -0.61
SEMA3B-203ENST00000419007 ADARB2-AS1A8MUL3 147 aa11.25□□□□□ -0.61
SEMA3B-203ENST00000419007 SYNJ2BPP57105 145 aa11.25□□□□□ -0.61
SEMA3B-203ENST00000419007 VCX2Q9H322 139 aa11.25□□□□□ -0.61
SEMA3B-203ENST00000419007 ZNF580Q9UK33 172 aa11.25□□□□□ -0.61
SEMA3B-203ENST00000419007 IGHV1OR15-1A0A075B7D0 117 aa11.24□□□□□ -0.61
SEMA3B-203ENST00000419007 A8MWV9 139 aa11.24□□□□□ -0.61
SEMA3B-203ENST00000419007 NACAE9PAV3 2078 aa11.24□□□□□ -0.61
SEMA3B-203ENST00000419007 A0A0J9YX75 114 aa11.24□□□□□ -0.61
SEMA3B-203ENST00000419007 K7EMT4 169 aa11.24□□□□□ -0.61
SEMA3B-203ENST00000419007 IGHV4-59P01825 116 aa11.24□□□□□ -0.61
SEMA3B-203ENST00000419007 CKS1BP61024 79 aa11.24□□□□□ -0.61
SEMA3B-203ENST00000419007 TRPT1Q86TN4 253 aaKnown RBP11.24□□□□□ -0.61
SEMA3B-203ENST00000419007 SPINK8P0C7L1 97 aa11.24□□□□□ -0.61
SEMA3B-203ENST00000419007 P0DMU3 169 aa11.24□□□□□ -0.61
SEMA3B-203ENST00000419007 FAM231AP0DMU4 169 aa11.24□□□□□ -0.61
SEMA3B-203ENST00000419007 FAM231CP0DMU5 169 aa11.24□□□□□ -0.61
SEMA3B-203ENST00000419007 RNASE13Q5GAN3 156 aaKnown RBP11.24□□□□□ -0.61
SEMA3B-203ENST00000419007 C9orf85Q96MD7 179 aa11.24□□□□□ -0.61
SEMA3B-203ENST00000419007 SPXQ9BT56 116 aa11.24□□□□□ -0.61
SEMA3B-203ENST00000419007 CCDC168Q8NDH2 2452 aa11.23□□□□□ -0.61
SEMA3B-203ENST00000419007 BEX4Q9NWD9 120 aaPredicted RBP11.23□□□□□ -0.61
SEMA3B-203ENST00000419007 TRBV6-5A0A0K0K1A5 114 aa11.23□□□□□ -0.61
SEMA3B-203ENST00000419007 TEN1Q86WV5 123 aa11.23□□□□□ -0.61
SEMA3B-203ENST00000419007 AMELXQ99217 191 aa11.23□□□□□ -0.61
SEMA3B-203ENST00000419007 PPDPFLQ8WWR9 84 aa11.22□□□□□ -0.61
SEMA3B-203ENST00000419007 CDIP1Q9H305 208 aa11.22□□□□□ -0.61
SEMA3B-203ENST00000419007 TRBV20-1A0A075B6N2 111 aa11.22□□□□□ -0.61
SEMA3B-203ENST00000419007 C9JAW5 83 aa11.22□□□□□ -0.61
SEMA3B-203ENST00000419007 MT-ATP8P03928 68 aa11.22□□□□□ -0.61
SEMA3B-203ENST00000419007 PRSS2P07478 247 aa11.22□□□□□ -0.61
SEMA3B-203ENST00000419007 FHL3Q13643 280 aa11.22□□□□□ -0.61
SEMA3B-203ENST00000419007 C20orf203Q8NBC4 194 aa11.22□□□□□ -0.61
SEMA3B-203ENST00000419007 ATP6V0E2Q8NHE4 81 aa11.22□□□□□ -0.61
SEMA3B-203ENST00000419007 CARD19Q96LW7 228 aa11.22□□□□□ -0.61
SEMA3B-203ENST00000419007 I3L3M4 83 aa11.22□□□□□ -0.61
SEMA3B-203ENST00000419007 BRI3O95415 125 aa11.22□□□□□ -0.61
SEMA3B-203ENST00000419007 CEMP1Q6PRD7 247 aaPredicted RBP11.22□□□□□ -0.61
SEMA3B-203ENST00000419007 MUSTN1Q8IVN3 82 aa11.22□□□□□ -0.61
SEMA3B-203ENST00000419007 TMEM223A0PJW6 202 aa11.21□□□□□ -0.61
SEMA3B-203ENST00000419007 KNCNA6PVL3 124 aa11.21□□□□□ -0.61
SEMA3B-203ENST00000419007 PRM2P04554 102 aa11.21□□□□□ -0.61
SEMA3B-203ENST00000419007 ZNF22P17026 224 aaPredicted RBP11.21□□□□□ -0.61
SEMA3B-203ENST00000419007 UBR5O95071 2799 aaPredicted RBP11.21□□□□□ -0.61
SEMA3B-203ENST00000419007 RHODO00212 210 aa11.21□□□□□ -0.62
SEMA3B-203ENST00000419007 LEPROTO15243 131 aa11.21□□□□□ -0.62
SEMA3B-203ENST00000419007 PSMB8P28062 276 aa11.21□□□□□ -0.62
SEMA3B-203ENST00000419007 ANKRD29Q8N6D5 301 aa11.21□□□□□ -0.62
SEMA3B-203ENST00000419007 TENM4Q6N022 2769 aa11.21□□□□□ -0.62
SEMA3B-203ENST00000419007 C2CD3Q4AC94 2353 aa11.21□□□□□ -0.62
SEMA3B-203ENST00000419007 PROK1P58294 105 aa11.2□□□□□ -0.62
SEMA3B-203ENST00000419007 RHOHQ15669 191 aa11.2□□□□□ -0.62
SEMA3B-203ENST00000419007 NRGNQ92686 78 aa11.2□□□□□ -0.62
SEMA3B-203ENST00000419007 ERG28Q9UKR5 140 aa11.2□□□□□ -0.62
SEMA3B-203ENST00000419007 CUBNO60494 3623 aa11.2□□□□□ -0.62
SEMA3B-203ENST00000419007 TLN2Q9Y4G6 2542 aa11.2□□□□□ -0.62
SEMA3B-203ENST00000419007 PRRC2AP48634 2157 aaKnown RBP11.2□□□□□ -0.62
SEMA3B-203ENST00000419007 NAV2Q8IVL1 2488 aa11.2□□□□□ -0.62
SEMA3B-203ENST00000419007 CD28P10747 220 aa11.2□□□□□ -0.62
SEMA3B-203ENST00000419007 CFHR3Q02985 330 aa11.2□□□□□ -0.62
SEMA3B-203ENST00000419007 NSUN5P1Q3KNT7 163 aa11.2□□□□□ -0.62
SEMA3B-203ENST00000419007 DEFB112Q30KQ8 113 aa11.2□□□□□ -0.62
SEMA3B-203ENST00000419007 HECTD1Q9ULT8 2610 aa11.2□□□□□ -0.62
SEMA3B-203ENST00000419007 IGLV4-3A0A075B6K6 122 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms