RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 S100ZQ8WXG8 99 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 ZNF625Q96I27 306 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 TMEM191AQ9H0A3 160 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 SCN3BQ9NY72 215 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 PCNTO95613 3336 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 TANC2Q9HCD6 1990 aa1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 GOLGB1Q14789 3259 aaKnown RBP1.27□□□□□ -2.21
HMGB1P49-201ENST00000418882 PLXNA1Q9UIW2 1896 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 DNAH12Q6ZR08 3092 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 ZNF736B4DX44 427 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 CCL16O15467 120 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 MRPS14O60783 128 aaKnown RBP1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 TRAPPC2P0DI81 140 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 TRAPPC2BP0DI82 140 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 S100PP25815 95 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 ETV6P41212 452 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 MEIG1Q5JSS6 88 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 C10orf55Q5SWW7 151 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 SCIMPQ6UWF3 145 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 TEX261Q6UWH6 196 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 Q6ZUT4 128 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 PATE1Q8WXA2 126 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 C14orf144Q96I85 54 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 LINC00052Q96N35 136 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 C12orf57Q99622 126 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 REG4Q9BYZ8 158 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 MDC1Q14676 2089 aaKnown RBP1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 UBR3Q6ZT12 1888 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 LOC285556D6RIA3 1793 aa1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 FN1P02751 2386 aaKnown RBP1.26□□□□□ -2.21
HMGB1P49-201ENST00000418882 SSC5DA1L4H1 1573 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 EML5Q05BV3 1969 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 KIAA1549Q9HCM3 1950 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 CASP8AP2Q9UKL3 1982 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 PLXNA4Q9HCM2 1894 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 TRBV6-5A0A0K0K1A5 114 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 BBIP1A8MTZ0 92 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 F6UZH7 168 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 APOC4-APOC2K7ER74 178 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 APOC2P02655 101 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 PYYP10082 97 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 PRB4P10163 310 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 HIST1H1DP16402 221 aaKnown RBP1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 LSM3P62310 102 aaKnown RBP1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 KRTAP21-3Q3LHN1 58 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 ASB16-AS1Q495Z4 193 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 Q5BKY6 102 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 SNX29P2Q8IUI4 249 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 C5orf17Q8NAS9 161 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 LSM10Q969L4 123 aaKnown RBP1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 CIB3Q96Q77 187 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 GNG8Q9UK08 70 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 ZFP30Q9Y2G7 519 aa1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 HELZP42694 1942 aaKnown RBP1.25□□□□□ -2.21
HMGB1P49-201ENST00000418882 PATJQ8NI35 1801 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 PHIPQ8WWQ0 1821 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 GOLGA4Q13439 2230 aaKnown RBP1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 CENPFP49454 3210 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 SRCAPQ6ZRS2 3230 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 FAM92AA1XBS5 289 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 FXYD1O00168 92 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 CORTO00230 105 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 TFF1P04155 84 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 APODP05090 189 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 SPRNQ5BIV9 151 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 CSAG1Q6PB30 78 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 C2orf82Q6UX34 121 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 CASC2Q6XLA1 102 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 ATP11AUNQ6ZP68 121 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 GKN2Q86XP6 184 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 C8orf59Q8N0T1 100 aaPredicted RBP1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 ATP6V0E2Q8NHE4 81 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 TMEM203Q969S6 136 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 LIMD2Q9BT23 127 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 SEC11CQ9BY50 192 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 MED9Q9NWA0 146 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 A0A0C4DFX4 3053 aa1.24□□□□□ -2.21
HMGB1P49-201ENST00000418882 EP400Q96L91 3159 aa1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 CEP350Q5VT06 3117 aa1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 RP1L1Q8IWN7 2480 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 TRAV12-2A0A075B6T6 113 aa1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 PNMA8CA0A1B0GUJ8 204 aa1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 RBP4P02753 201 aa1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 FREM3P0C091 2139 aa1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 SPTBP11277 2137 aa1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 IL7P13232 177 aa1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 SLC25A26Q70HW3 274 aa1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 TCTEX1D1Q8N7M0 179 aa1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 PP6455Q8WZ26 134 aa1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 SMIM7Q9BQ49 75 aa1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 MRPL57Q9BQC6 102 aaKnown RBP1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 SNRNP25Q9BV90 132 aaKnown RBP1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 AGPAT4-IT1Q9H0P7 198 aa1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 COA4Q9NYJ1 87 aa1.23□□□□□ -2.21
HMGB1P49-201ENST00000418882 PLXNA2O75051 1894 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 SNRNP200O75643 2136 aaKnown RBP1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 MYO7BQ6PIF6 2116 aa1.22□□□□□ -2.21
HMGB1P49-201ENST00000418882 BRWD1Q9NSI6 2320 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms