RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 NTM-AS1Q6ZSK4 140 aa4.97□□□□□ -1.61
HLA-DPA1-241ENST00000417724 SPACA4Q8TDM5 124 aa4.97□□□□□ -1.61
HLA-DPA1-241ENST00000417724 DERL1Q9BUN8 251 aa4.97□□□□□ -1.61
HLA-DPA1-241ENST00000417724 PLAC8Q9NZF1 115 aa4.97□□□□□ -1.61
HLA-DPA1-241ENST00000417724 VAX2Q9UIW0 290 aa4.97□□□□□ -1.61
HLA-DPA1-241ENST00000417724 A0A0J9YXV3 536 aa4.96□□□□□ -1.62
HLA-DPA1-241ENST00000417724 TRBV6-1A0A0K0K1D8 114 aa4.96□□□□□ -1.62
HLA-DPA1-241ENST00000417724 UBE2G2P60604 165 aa4.96□□□□□ -1.62
HLA-DPA1-241ENST00000417724 UBE2G1P62253 170 aa4.96□□□□□ -1.62
HLA-DPA1-241ENST00000417724 WDR73Q6P4I2 378 aa4.96□□□□□ -1.62
HLA-DPA1-241ENST00000417724 LINC00299Q6ZSB3 139 aa4.96□□□□□ -1.62
HLA-DPA1-241ENST00000417724 GTSF1Q8WW33 167 aa4.96□□□□□ -1.62
HLA-DPA1-241ENST00000417724 S100ZQ8WXG8 99 aa4.96□□□□□ -1.62
HLA-DPA1-241ENST00000417724 FMC1Q96HJ9 113 aa4.96□□□□□ -1.62
HLA-DPA1-241ENST00000417724 MARVELD1Q9BSK0 173 aa4.96□□□□□ -1.62
HLA-DPA1-241ENST00000417724 ZNF471Q9BX82 626 aaPredicted RBP4.96□□□□□ -1.62
HLA-DPA1-241ENST00000417724 NDUFA13Q9P0J0 144 aa4.96□□□□□ -1.62
HLA-DPA1-241ENST00000417724 KIF25-AS1Q9Y6Z4 181 aa4.96□□□□□ -1.62
HLA-DPA1-241ENST00000417724 SLPIP03973 132 aa4.95□□□□□ -1.62
HLA-DPA1-241ENST00000417724 KRTAP10-8P60410 259 aa4.95□□□□□ -1.62
HLA-DPA1-241ENST00000417724 IQCJQ1A5X6 159 aa4.95□□□□□ -1.62
HLA-DPA1-241ENST00000417724 REG3GQ6UW15 175 aa4.95□□□□□ -1.62
HLA-DPA1-241ENST00000417724 IGHV1-24A0A0C4DH33 117 aa4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 CTXND1A0A1B0GTU2 59 aa4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 A0A1B0GUV1 79 aa4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 FAM74A7A6NL05 159 aa4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 UPK1BO75841 260 aa4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 GAS8-AS1O95177 125 aa4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 LTAP01374 205 aa4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 SMIM17P0DL12 118 aa4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 RPS10P46783 165 aaKnown RBP4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 RAB5CP51148 216 aa4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 PRR3P79522 188 aaKnown RBP4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 COX6A2Q02221 97 aa4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 ODF1Q14990 250 aa4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 MAJINQ3KP22 176 aa4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 SPANXN1Q5VSR9 72 aa4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 CFAP161Q6P656 301 aa4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 SPINK6Q6UWN8 80 aa4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 OR10AG1Q8NH19 301 aa4.94□□□□□ -1.62
HLA-DPA1-241ENST00000417724 NDUFS6O75380 124 aaKnown RBP4.93□□□□□ -1.62
HLA-DPA1-241ENST00000417724 OR5AL1P0C617 328 aa4.93□□□□□ -1.62
HLA-DPA1-241ENST00000417724 C20orf203Q8NBC4 194 aa4.93□□□□□ -1.62
HLA-DPA1-241ENST00000417724 AQP10Q96PS8 301 aa4.93□□□□□ -1.62
HLA-DPA1-241ENST00000417724 TCEAL7Q9BRU2 100 aa4.93□□□□□ -1.62
HLA-DPA1-241ENST00000417724 SSBP4Q9BWG4 385 aaPredicted RBP4.93□□□□□ -1.62
HLA-DPA1-241ENST00000417724 IGKV2-24A0A0C4DH68 120 aa4.92□□□□□ -1.62
HLA-DPA1-241ENST00000417724 H7C1H1 209 aa4.92□□□□□ -1.62
HLA-DPA1-241ENST00000417724 SNAI2O43623 268 aa4.92□□□□□ -1.62
HLA-DPA1-241ENST00000417724 CXCL1P09341 107 aa4.92□□□□□ -1.62
HLA-DPA1-241ENST00000417724 FHITP49789 147 aa4.92□□□□□ -1.62
HLA-DPA1-241ENST00000417724 SSTP61278 116 aa4.92□□□□□ -1.62
HLA-DPA1-241ENST00000417724 ZNF726P1Q15940 193 aa4.92□□□□□ -1.62
HLA-DPA1-241ENST00000417724 CST9LP1Q5W188 147 aa4.92□□□□□ -1.62
HLA-DPA1-241ENST00000417724 STPG4Q8N801 248 aa4.92□□□□□ -1.62
HLA-DPA1-241ENST00000417724 PRSS3P2Q8NHM4 247 aa4.92□□□□□ -1.62
HLA-DPA1-241ENST00000417724 LYPD6BQ8NI32 183 aa4.92□□□□□ -1.62
HLA-DPA1-241ENST00000417724 TMEM243Q9BU79 118 aa4.92□□□□□ -1.62
HLA-DPA1-241ENST00000417724 TNXBP22105 4242 aa4.92□□□□□ -1.62
HLA-DPA1-241ENST00000417724 IGLV4-60A0A075B6I1 120 aa4.91□□□□□ -1.62
HLA-DPA1-241ENST00000417724 BORCS7-ASMTA0A0B4J1R7 106 aa4.91□□□□□ -1.62
HLA-DPA1-241ENST00000417724 MUC21A0A0G2JKD1 596 aa4.91□□□□□ -1.62
HLA-DPA1-241ENST00000417724 MUC21A0A140T8X8 626 aa4.91□□□□□ -1.62
HLA-DPA1-241ENST00000417724 M0QY20 66 aa4.91□□□□□ -1.62
HLA-DPA1-241ENST00000417724 S100A9P06702 114 aaKnown RBP4.91□□□□□ -1.62
HLA-DPA1-241ENST00000417724 AKR1C3P42330 323 aa4.91□□□□□ -1.62
HLA-DPA1-241ENST00000417724 SULT1A2P50226 295 aa4.91□□□□□ -1.62
HLA-DPA1-241ENST00000417724 DEFA1P59665 94 aa4.91□□□□□ -1.62
HLA-DPA1-241ENST00000417724 DEFA3P59666 94 aa4.91□□□□□ -1.62
HLA-DPA1-241ENST00000417724 IFITM3Q01628 133 aa4.91□□□□□ -1.62
HLA-DPA1-241ENST00000417724 AKR1C8PQ5T2L2 129 aa4.91□□□□□ -1.62
HLA-DPA1-241ENST00000417724 INO80EQ8NBZ0 244 aaPredicted RBP4.91□□□□□ -1.62
HLA-DPA1-241ENST00000417724 STOML3Q8TAV4 291 aa4.91□□□□□ -1.62
HLA-DPA1-241ENST00000417724 AP1S3Q96PC3 154 aa4.91□□□□□ -1.62
HLA-DPA1-241ENST00000417724 LINC00474Q9P2X8 69 aa4.91□□□□□ -1.62
HLA-DPA1-241ENST00000417724 GAGE12HA6NDE8 117 aa4.9□□□□□ -1.63
HLA-DPA1-241ENST00000417724 UBE2L6O14933 153 aa4.9□□□□□ -1.63
HLA-DPA1-241ENST00000417724 SRSF9Q13242 221 aaKnown RBP eCLIP4.9□□□□□ -1.63
HLA-DPA1-241ENST00000417724 RPL7L1Q6DKI1 246 aaKnown RBP4.9□□□□□ -1.63
HLA-DPA1-241ENST00000417724 C15orf56Q8N910 161 aa4.9□□□□□ -1.63
HLA-DPA1-241ENST00000417724 GFRA4Q9GZZ7 299 aa4.9□□□□□ -1.63
HLA-DPA1-241ENST00000417724 PKIGQ9Y2B9 76 aa4.9□□□□□ -1.63
HLA-DPA1-241ENST00000417724 MAP1LC3B2A6NCE7 125 aa4.89□□□□□ -1.63
HLA-DPA1-241ENST00000417724 MGPP08493 103 aa4.89□□□□□ -1.63
HLA-DPA1-241ENST00000417724 NKX2-5P52952 324 aaPredicted RBP4.89□□□□□ -1.63
HLA-DPA1-241ENST00000417724 HIGD2BQ4VC39 106 aa4.89□□□□□ -1.63
HLA-DPA1-241ENST00000417724 Q6ZRP5 223 aa4.89□□□□□ -1.63
HLA-DPA1-241ENST00000417724 BAGE2Q86Y30 109 aa4.89□□□□□ -1.63
HLA-DPA1-241ENST00000417724 MAP1LC3BQ9GZQ8 125 aa4.89□□□□□ -1.63
HLA-DPA1-241ENST00000417724 A0A096LNI7 61 aa4.88□□□□□ -1.63
HLA-DPA1-241ENST00000417724 GVQW2A0A096LPI5 108 aaPredicted RBP4.88□□□□□ -1.63
HLA-DPA1-241ENST00000417724 IGKV3OR2-268A0A0C4DH90 116 aa4.88□□□□□ -1.63
HLA-DPA1-241ENST00000417724 RASL11AQ6T310 242 aa4.88□□□□□ -1.63
HLA-DPA1-241ENST00000417724 PGLYRP4Q96LB8 373 aa4.88□□□□□ -1.63
HLA-DPA1-241ENST00000417724 MLST8Q9BVC4 326 aa4.88□□□□□ -1.63
HLA-DPA1-241ENST00000417724 NIT2Q9NQR4 276 aa4.88□□□□□ -1.63
HLA-DPA1-241ENST00000417724 FAM231BA6NCW3 169 aa4.87□□□□□ -1.63
HLA-DPA1-241ENST00000417724 PAGE4O60829 102 aa4.87□□□□□ -1.63
HLA-DPA1-241ENST00000417724 AMTP48728 403 aa4.87□□□□□ -1.63
HLA-DPA1-241ENST00000417724 COTL1Q14019 142 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms