RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 CFAP46Q8IYW2 2715 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 TNRC18O15417 2968 aaPredicted RBP-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 ANKRD11Q6UB99 2663 aaPredicted RBP-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 ANKRD31Q8N7Z5 1873 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 LAMB1P07942 1786 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 RBBP6Q7Z6E9 1792 aaKnown RBP-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 BCL9LQ86UU0 1499 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 ANKRD30AQ9BXX3 1397 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 TRBV20-1A0A075B6N2 111 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 TRAV12-2A0A075B6T6 113 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 TRAV12-3A0A0B4J271 114 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 PNMA8CA0A1B0GUJ8 204 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 ZNF670-ZNF695F2Z2N8 137 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 SMIM24O75264 130 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 PIRTP0C851 137 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 IFITM1P13164 125 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 SPRR2EP22531 72 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 MT4P47944 62 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 CKS1BP61024 79 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 UBE2G1P62253 170 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 LSM3P62310 102 aaKnown RBP-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 COX6A2Q02221 97 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 Q5VSD8 79 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 Q6ZRX8 168 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 C4orf33Q8N1A6 199 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 COX7B2Q8TF08 81 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 PPP1R1CQ8WVI7 109 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 DSCR8Q96T75 97 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 CNFNQ9BYD5 112 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 AGPAT4-IT1Q9H0P7 198 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 KNL1Q8NG31 2342 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 DNAJC13O75165 2243 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 HELZP42694 1942 aaKnown RBP-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 PLXNB2O15031 1838 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 CSMD3Q7Z407 3707 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 FAM186AA6NE01 2351 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 CCDC171Q6TFL3 1326 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 DMXL1Q9Y485 3027 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 MTORP42345 2549 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 ZNF142P52746 1687 aaPredicted RBP-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 PPRC1Q5VV67 1664 aaKnown RBP-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 RREB1Q92766 1687 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 QRICH2Q9H0J4 1663 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 ACACAQ13085 2346 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 FLGP20930 4061 aaPredicted RBP-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 PCLOQ9Y6V0 5065 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 UHRF1BP1LA0JNW5 1464 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 IQSEC2Q5JU85 1478 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 ARHGEF10O15013 1369 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 IBTKQ9P2D0 1353 aaPredicted RBP-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 NBEAQ8NFP9 2946 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 TRBV7-1A0A0A6YYK4 115 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 BORCS7-ASMTA0A0B4J1R7 106 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 TRAV2A0A0B4J234 112 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 TCRBV3S1A0A5B6 114 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 J3QLW9 94 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 TSPAN19P0C672 248 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 SCGB1A1P11684 91 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 NEFHP12036 1026 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 UBE2D1P51668 147 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 RRAS2P62070 204 aaPredicted RBP-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 SSBP1Q04837 148 aaKnown RBP-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 SPCS2Q15005 226 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 KRTAP19-8Q3LI54 63 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 CCDC153Q494R4 210 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 C9orf116Q5BN46 136 aaPredicted RBP-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 SSBP3-AS1Q7Z2R9 100 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 AKAP14Q86UN6 197 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 NDUFA11Q86Y39 141 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 SDF2Q99470 211 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 WFDC6Q9BQY6 131 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 PRR15LQ9BU68 103 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 SMIM3Q9BZL3 60 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 BPESC1Q9GZL8 116 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 COA4Q9NYJ1 87 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 SCP2D1Q9UJQ7 156 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 HMCN2Q8NDA2 5059 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 PKHD1P08F94 4074 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 DOCK11Q5JSL3 2073 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 KMT2CQ8NEZ4 4911 aaKnown RBP-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 NBEAL2Q6ZNJ1 2754 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 PLXNA1Q9UIW2 1896 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 GCN1Q92616 2671 aaKnown RBP-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 DLEC1Q9Y238 1755 aa-0.14□□□□□ -2.43
TRAPPC13-203ENST00000415825 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 BICRAQ9NZM4 1560 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 MGAM2Q2M2H8 2515 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 TLN1Q9Y490 2541 aaKnown RBP-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 XIRP1Q702N8 1843 aaKnown RBP-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 REV3LO60673 3130 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 TNS1Q9HBL0 1735 aaKnown RBP-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 PLCE1Q9P212 2302 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 HSPG2P98160 4391 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 A0A0D9SFI3 127 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 FAM92AA1XBS5 289 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 RBAKDNA6NC62 111 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 F2Z2F3 143 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 NPFFO15130 113 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 PIN1P1O15428 100 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms