RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 MUC21Q5SSG8 566 aa7.19□□□□□ -1.26
LINC01643-201ENST00000412218 ZNF664Q8N3J9 261 aa7.19□□□□□ -1.26
LINC01643-201ENST00000412218 POM121L12Q8N7R1 296 aa7.19□□□□□ -1.26
LINC01643-201ENST00000412218 VPS13DQ5THJ4 4388 aa7.18□□□□□ -1.26
LINC01643-201ENST00000412218 LYRM9A8MSI8 78 aa7.18□□□□□ -1.26
LINC01643-201ENST00000412218 HTN3P15516 51 aa7.18□□□□□ -1.26
LINC01643-201ENST00000412218 AZU1P20160 251 aa7.18□□□□□ -1.26
LINC01643-201ENST00000412218 DDTP30046 118 aa7.18□□□□□ -1.26
LINC01643-201ENST00000412218 CDKN1BP46527 198 aa7.18□□□□□ -1.26
LINC01643-201ENST00000412218 SSTP61278 116 aa7.18□□□□□ -1.26
LINC01643-201ENST00000412218 FAM159AQ6UWV7 190 aa7.18□□□□□ -1.26
LINC01643-201ENST00000412218 Q8N976 141 aa7.18□□□□□ -1.26
LINC01643-201ENST00000412218 MRAP2Q96G30 205 aa7.18□□□□□ -1.26
LINC01643-201ENST00000412218 AP1S3Q96PC3 154 aa7.18□□□□□ -1.26
LINC01643-201ENST00000412218 TMEM70Q9BUB7 260 aa7.18□□□□□ -1.26
LINC01643-201ENST00000412218 PRO1933Q9H354 126 aa7.18□□□□□ -1.26
LINC01643-201ENST00000412218 NXT2Q9NPJ8 142 aaKnown RBP7.18□□□□□ -1.26
LINC01643-201ENST00000412218 SCRT2Q9NQ03 307 aa7.18□□□□□ -1.26
LINC01643-201ENST00000412218 MSRB1Q9NZV6 116 aa7.18□□□□□ -1.26
LINC01643-201ENST00000412218 PHLDA3Q9Y5J5 127 aa7.18□□□□□ -1.26
LINC01643-201ENST00000412218 NXPH4O95158 308 aa7.17□□□□□ -1.26
LINC01643-201ENST00000412218 NPYP01303 97 aa7.17□□□□□ -1.26
LINC01643-201ENST00000412218 TDRG1Q3Y452 100 aa7.17□□□□□ -1.26
LINC01643-201ENST00000412218 LINC01587Q99440 93 aa7.17□□□□□ -1.26
LINC01643-201ENST00000412218 C20orf144Q9BQM9 153 aa7.17□□□□□ -1.26
LINC01643-201ENST00000412218 MAP1LC3CQ9BXW4 147 aa7.17□□□□□ -1.26
LINC01643-201ENST00000412218 DPH3P1Q9H4G8 78 aa7.17□□□□□ -1.26
LINC01643-201ENST00000412218 FRAS1Q86XX4 4008 aa7.17□□□□□ -1.26
LINC01643-201ENST00000412218 LINC01546A6NGU7 62 aa7.16□□□□□ -1.26
LINC01643-201ENST00000412218 NCR2O95944 276 aa7.16□□□□□ -1.26
LINC01643-201ENST00000412218 IFI27P40305 119 aaPredicted RBP7.16□□□□□ -1.26
LINC01643-201ENST00000412218 KIR3DS1Q14943 382 aa7.16□□□□□ -1.26
LINC01643-201ENST00000412218 PET117Q6UWS5 81 aa7.16□□□□□ -1.26
LINC01643-201ENST00000412218 RNASE8Q8TDE3 154 aaKnown RBP7.16□□□□□ -1.26
LINC01643-201ENST00000412218 C16orf74Q96GX8 76 aa7.16□□□□□ -1.26
LINC01643-201ENST00000412218 TIMM8BQ9Y5J9 83 aaPredicted RBP7.16□□□□□ -1.26
LINC01643-201ENST00000412218 DNAH6Q9C0G6 4158 aa7.16□□□□□ -1.26
LINC01643-201ENST00000412218 TRGV11A0A075B6L2 103 aa7.15□□□□□ -1.26
LINC01643-201ENST00000412218 LOC389332A0A1B0GUA5 103 aa7.15□□□□□ -1.26
LINC01643-201ENST00000412218 SMKR1H3BMG3 65 aa7.15□□□□□ -1.26
LINC01643-201ENST00000412218 SYS1-DBNDD2H3BUS1 97 aa7.15□□□□□ -1.26
LINC01643-201ENST00000412218 M0R381 172 aa7.15□□□□□ -1.26
LINC01643-201ENST00000412218 TNFRSF6BO95407 300 aa7.15□□□□□ -1.26
LINC01643-201ENST00000412218 PPP1R17O96001 155 aa7.15□□□□□ -1.26
LINC01643-201ENST00000412218 HBDP02042 147 aa7.15□□□□□ -1.26
LINC01643-201ENST00000412218 DEFB130BP0DP73 79 aa7.15□□□□□ -1.26
LINC01643-201ENST00000412218 DEFB130AP0DP74 79 aa7.15□□□□□ -1.26
LINC01643-201ENST00000412218 HTN1P15515 57 aa7.15□□□□□ -1.26
LINC01643-201ENST00000412218 EVI2AP22794 236 aa7.15□□□□□ -1.26
LINC01643-201ENST00000412218 UBE2DNLQ8IWF7 75 aa7.15□□□□□ -1.26
LINC01643-201ENST00000412218 SYT8Q8NBV8 401 aa7.15□□□□□ -1.26
LINC01643-201ENST00000412218 TMEM263Q8WUH6 116 aaKnown RBP7.15□□□□□ -1.26
LINC01643-201ENST00000412218 IGHV1OR15-1A0A075B7D0 117 aa7.14□□□□□ -1.27
LINC01643-201ENST00000412218 TRAV12-3A0A0B4J271 114 aa7.14□□□□□ -1.27
LINC01643-201ENST00000412218 PRSS47A8MTI9 375 aa7.14□□□□□ -1.27
LINC01643-201ENST00000412218 RNASE3P12724 160 aaKnown RBP7.14□□□□□ -1.27
LINC01643-201ENST00000412218 LGALS9BQ3B8N2 356 aa7.14□□□□□ -1.27
LINC01643-201ENST00000412218 Q6ZQT7 251 aa7.14□□□□□ -1.27
LINC01643-201ENST00000412218 LINC00336Q6ZUF6 198 aa7.14□□□□□ -1.27
LINC01643-201ENST00000412218 Q8N8P6 123 aa7.14□□□□□ -1.27
LINC01643-201ENST00000412218 C15orf53Q8NAA6 179 aa7.14□□□□□ -1.27
LINC01643-201ENST00000412218 PAM16Q9Y3D7 125 aa7.14□□□□□ -1.27
LINC01643-201ENST00000412218 DNAH10Q8IVF4 4471 aa7.13□□□□□ -1.27
LINC01643-201ENST00000412218 TRAV9-2A0A087WT02 112 aa7.13□□□□□ -1.27
LINC01643-201ENST00000412218 CBY3A6NI87 242 aa7.13□□□□□ -1.27
LINC01643-201ENST00000412218 M0R2N4 97 aa7.13□□□□□ -1.27
LINC01643-201ENST00000412218 ATP5G1P05496 136 aa7.13□□□□□ -1.27
LINC01643-201ENST00000412218 SMIM17P0DL12 118 aa7.13□□□□□ -1.27
LINC01643-201ENST00000412218 SPATA45Q537H7 98 aa7.13□□□□□ -1.27
LINC01643-201ENST00000412218 LBHQ53QV2 105 aaPredicted RBP7.13□□□□□ -1.27
LINC01643-201ENST00000412218 SPATA12Q7Z6I5 190 aa7.13□□□□□ -1.27
LINC01643-201ENST00000412218 MRPL52Q86TS9 123 aaKnown RBP7.13□□□□□ -1.27
LINC01643-201ENST00000412218 C9orf85Q96MD7 179 aa7.13□□□□□ -1.27
LINC01643-201ENST00000412218 NOP10Q9NPE3 64 aaKnown RBP7.13□□□□□ -1.27
LINC01643-201ENST00000412218 HECTD4Q9Y4D8 3996 aa7.13□□□□□ -1.27
LINC01643-201ENST00000412218 IGLV2-18A0A075B6J9 118 aa7.12□□□□□ -1.27
LINC01643-201ENST00000412218 IGHV3-16A0A0C4DH30 117 aa7.12□□□□□ -1.27
LINC01643-201ENST00000412218 A0A1B0GVY2 172 aa7.12□□□□□ -1.27
LINC01643-201ENST00000412218 F5H768 121 aa7.12□□□□□ -1.27
LINC01643-201ENST00000412218 K7EMI3 77 aa7.12□□□□□ -1.27
LINC01643-201ENST00000412218 RTL8CO15255 209 aa7.12□□□□□ -1.27
LINC01643-201ENST00000412218 GNRH2O43555 120 aa7.12□□□□□ -1.27
LINC01643-201ENST00000412218 LINC01545Q5VT33 79 aa7.12□□□□□ -1.27
LINC01643-201ENST00000412218 Q6ZR54 194 aa7.12□□□□□ -1.27
LINC01643-201ENST00000412218 LINC00612Q8N6U2 182 aa7.12□□□□□ -1.27
LINC01643-201ENST00000412218 NRACQ8N912 160 aa7.12□□□□□ -1.27
LINC01643-201ENST00000412218 C20orf78Q9BR46 151 aa7.12□□□□□ -1.27
LINC01643-201ENST00000412218 MIEN1Q9BRT3 115 aa7.12□□□□□ -1.27
LINC01643-201ENST00000412218 A0A096LNJ9 63 aa7.11□□□□□ -1.27
LINC01643-201ENST00000412218 HSBP1L1C9JCN9 74 aa7.11□□□□□ -1.27
LINC01643-201ENST00000412218 MGPP08493 103 aa7.11□□□□□ -1.27
LINC01643-201ENST00000412218 FCER1GP30273 86 aa7.11□□□□□ -1.27
LINC01643-201ENST00000412218 LINC00173Q6ZV60 143 aa7.11□□□□□ -1.27
LINC01643-201ENST00000412218 LINC00467Q9BRT7 94 aa7.11□□□□□ -1.27
LINC01643-201ENST00000412218 SMIM2Q9BVW6 85 aa7.11□□□□□ -1.27
LINC01643-201ENST00000412218 ST20Q9HBF5 79 aa7.11□□□□□ -1.27
LINC01643-201ENST00000412218 UQCR10Q9UDW1 63 aa7.11□□□□□ -1.27
LINC01643-201ENST00000412218 GATA1P15976 413 aaPredicted RBP7.1□□□□□ -1.27
LINC01643-201ENST00000412218 RPL32P62910 135 aaKnown RBP7.1□□□□□ -1.27
LINC01643-201ENST00000412218 C14orf178Q8N769 122 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms