RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 ICOSQ9Y6W8 199 aa10.98□□□□□ -0.65
AP001056.1-201ENST00000411956 A0A096LPF7 62 aa10.97□□□□□ -0.65
AP001056.1-201ENST00000411956 GAGE12JA6NER3 117 aa10.97□□□□□ -0.65
AP001056.1-201ENST00000411956 SMKR1H3BMG3 65 aa10.97□□□□□ -0.65
AP001056.1-201ENST00000411956 NUDT3O95989 172 aa10.97□□□□□ -0.65
AP001056.1-201ENST00000411956 GAGE1Q13065 139 aa10.97□□□□□ -0.65
AP001056.1-201ENST00000411956 GAGE4Q13068 117 aa10.97□□□□□ -0.65
AP001056.1-201ENST00000411956 GAGE5Q13069 117 aa10.97□□□□□ -0.65
AP001056.1-201ENST00000411956 GAGE13Q4V321 117 aa10.97□□□□□ -0.65
AP001056.1-201ENST00000411956 CASC10Q5T4H9 136 aa10.97□□□□□ -0.65
AP001056.1-201ENST00000411956 RPL39LQ96EH5 51 aaKnown RBP10.97□□□□□ -0.65
AP001056.1-201ENST00000411956 APLNQ9ULZ1 77 aa10.97□□□□□ -0.65
AP001056.1-201ENST00000411956 D6R8Y8 96 aa10.96□□□□□ -0.65
AP001056.1-201ENST00000411956 MT-ND6P03923 174 aa10.96□□□□□ -0.65
AP001056.1-201ENST00000411956 SRIP30626 198 aa10.96□□□□□ -0.65
AP001056.1-201ENST00000411956 RPS10P46783 165 aaKnown RBP10.96□□□□□ -0.65
AP001056.1-201ENST00000411956 RPL36AP83881 106 aaKnown RBP10.96□□□□□ -0.65
AP001056.1-201ENST00000411956 RPL36ALQ969Q0 106 aaKnown RBP10.96□□□□□ -0.65
AP001056.1-201ENST00000411956 TCTAP57738 103 aa10.95□□□□□ -0.66
AP001056.1-201ENST00000411956 MRPL23Q16540 153 aaKnown RBP10.95□□□□□ -0.66
AP001056.1-201ENST00000411956 OR10J3Q5JRS4 329 aa10.95□□□□□ -0.66
AP001056.1-201ENST00000411956 ZNRF2Q8NHG8 242 aa10.95□□□□□ -0.66
AP001056.1-201ENST00000411956 DNAJC30Q96LL9 226 aa10.95□□□□□ -0.66
AP001056.1-201ENST00000411956 NIT2Q9NQR4 276 aa10.95□□□□□ -0.66
AP001056.1-201ENST00000411956 TRBV7-3A0A075B6L6 115 aa10.94□□□□□ -0.66
AP001056.1-201ENST00000411956 COLCA2A8K830 154 aa10.94□□□□□ -0.66
AP001056.1-201ENST00000411956 APCSP02743 223 aa10.94□□□□□ -0.66
AP001056.1-201ENST00000411956 CKS2P33552 79 aa10.94□□□□□ -0.66
AP001056.1-201ENST00000411956 UBE2D3P61077 147 aa10.94□□□□□ -0.66
AP001056.1-201ENST00000411956 UBE2D2P62837 147 aa10.94□□□□□ -0.66
AP001056.1-201ENST00000411956 NRACQ8N912 160 aa10.94□□□□□ -0.66
AP001056.1-201ENST00000411956 MRPL18Q9H0U6 180 aaKnown RBP10.94□□□□□ -0.66
AP001056.1-201ENST00000411956 PPBPP02775 128 aa10.93□□□□□ -0.66
AP001056.1-201ENST00000411956 ORMDL3Q8N138 153 aa10.93□□□□□ -0.66
AP001056.1-201ENST00000411956 TRAPPC1Q9Y5R8 145 aa10.93□□□□□ -0.66
AP001056.1-201ENST00000411956 TNFRSF18Q9Y5U5 241 aa10.93□□□□□ -0.66
AP001056.1-201ENST00000411956 PLECQ15149 4684 aaKnown RBP10.92□□□□□ -0.66
AP001056.1-201ENST00000411956 TRBV6-5A0A0K0K1A5 114 aa10.92□□□□□ -0.66
AP001056.1-201ENST00000411956 KIAA1644Q3SXP7 199 aa10.92□□□□□ -0.66
AP001056.1-201ENST00000411956 NEGR1Q7Z3B1 354 aa10.92□□□□□ -0.66
AP001056.1-201ENST00000411956 PPP1R17O96001 155 aa10.91□□□□□ -0.66
AP001056.1-201ENST00000411956 NPYP01303 97 aa10.91□□□□□ -0.66
AP001056.1-201ENST00000411956 SH2D6Q7Z4S9 175 aa10.91□□□□□ -0.66
AP001056.1-201ENST00000411956 ATP6V0E2Q8NHE4 81 aa10.91□□□□□ -0.66
AP001056.1-201ENST00000411956 PRELID3AQ96N28 172 aa10.91□□□□□ -0.66
AP001056.1-201ENST00000411956 IGHV3-38A0A0C4DH36 116 aa10.9□□□□□ -0.66
AP001056.1-201ENST00000411956 TNFRSF6BO95407 300 aa10.9□□□□□ -0.66
AP001056.1-201ENST00000411956 RAB5AP20339 215 aa10.9□□□□□ -0.66
AP001056.1-201ENST00000411956 FABP9Q0Z7S8 132 aa10.9□□□□□ -0.66
AP001056.1-201ENST00000411956 ST20Q9HBF5 79 aa10.9□□□□□ -0.66
AP001056.1-201ENST00000411956 SDHAF1A6NFY7 115 aa10.89□□□□□ -0.67
AP001056.1-201ENST00000411956 PHOX2AO14813 284 aa10.89□□□□□ -0.67
AP001056.1-201ENST00000411956 DAZ4Q86SG3 579 aaKnown RBP10.89□□□□□ -0.67
AP001056.1-201ENST00000411956 DAZ3Q9NR90 486 aaKnown RBP10.89□□□□□ -0.67
AP001056.1-201ENST00000411956 LAMTOR2Q9Y2Q5 125 aa10.89□□□□□ -0.67
AP001056.1-201ENST00000411956 SUMO2P61956 95 aaKnown RBP10.88□□□□□ -0.67
AP001056.1-201ENST00000411956 ESRGQ1W209 222 aa10.88□□□□□ -0.67
AP001056.1-201ENST00000411956 LYPD5Q6UWN5 251 aa10.88□□□□□ -0.67
AP001056.1-201ENST00000411956 C20orf78Q9BR46 151 aa10.88□□□□□ -0.67
AP001056.1-201ENST00000411956 TMEM70Q9BUB7 260 aa10.88□□□□□ -0.67
AP001056.1-201ENST00000411956 GTSF1LQ9H1H1 148 aa10.88□□□□□ -0.67
AP001056.1-201ENST00000411956 POLR2KP53803 58 aaKnown RBP10.87□□□□□ -0.67
AP001056.1-201ENST00000411956 TIRAPP58753 221 aa10.87□□□□□ -0.67
AP001056.1-201ENST00000411956 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.87□□□□□ -0.67
AP001056.1-201ENST00000411956 ALKBH7Q9BT30 221 aaPredicted RBP10.87□□□□□ -0.67
AP001056.1-201ENST00000411956 CCL18P55774 89 aa10.86□□□□□ -0.67
AP001056.1-201ENST00000411956 RPL32P62910 135 aaKnown RBP10.86□□□□□ -0.67
AP001056.1-201ENST00000411956 SMIM2Q9BVW6 85 aa10.86□□□□□ -0.67
AP001056.1-201ENST00000411956 LINC00588Q9Y4M8 146 aa10.86□□□□□ -0.67
AP001056.1-201ENST00000411956 TRBV27A0A0K0K1C4 114 aa10.85□□□□□ -0.67
AP001056.1-201ENST00000411956 TRGC2P03986 189 aa10.85□□□□□ -0.67
AP001056.1-201ENST00000411956 MAP1LC3AQ9H492 121 aa10.85□□□□□ -0.67
AP001056.1-201ENST00000411956 PRSS47A8MTI9 375 aa10.84□□□□□ -0.67
AP001056.1-201ENST00000411956 I3L3M4 83 aa10.84□□□□□ -0.67
AP001056.1-201ENST00000411956 PMCHP20382 165 aa10.84□□□□□ -0.67
AP001056.1-201ENST00000411956 COTL1Q14019 142 aa10.84□□□□□ -0.67
AP001056.1-201ENST00000411956 TMEM97Q5BJF2 176 aa10.84□□□□□ -0.67
AP001056.1-201ENST00000411956 LELP1Q5T871 98 aa10.84□□□□□ -0.67
AP001056.1-201ENST00000411956 NTM-AS1Q6ZSK4 140 aa10.84□□□□□ -0.67
AP001056.1-201ENST00000411956 UBE2DNLQ8IWF7 75 aa10.84□□□□□ -0.67
AP001056.1-201ENST00000411956 DEFB104AQ8WTQ1 72 aa10.84□□□□□ -0.67
AP001056.1-201ENST00000411956 MRPS16Q9Y3D3 137 aaKnown RBP10.84□□□□□ -0.67
AP001056.1-201ENST00000411956 LOC389332A0A1B0GUA5 103 aa10.83□□□□□ -0.68
AP001056.1-201ENST00000411956 VCYO14598 125 aa10.83□□□□□ -0.68
AP001056.1-201ENST00000411956 IGLV2-18A0A075B6J9 118 aa10.82□□□□□ -0.68
AP001056.1-201ENST00000411956 TRBV6-8A0A0A6YYG3 113 aa10.82□□□□□ -0.68
AP001056.1-201ENST00000411956 TSHBP01222 138 aa10.82□□□□□ -0.68
AP001056.1-201ENST00000411956 LGALS9CQ6DKI2 356 aa10.82□□□□□ -0.68
AP001056.1-201ENST00000411956 LYSTQ99698 3801 aa10.82□□□□□ -0.68
AP001056.1-201ENST00000411956 UPK3BQ9BT76 320 aa10.82□□□□□ -0.68
AP001056.1-201ENST00000411956 IQCJQ1A5X6 159 aa10.81□□□□□ -0.68
AP001056.1-201ENST00000411956 C18orf32Q8TCD1 76 aa10.81□□□□□ -0.68
AP001056.1-201ENST00000411956 LINC00476Q8WZB0 136 aa10.81□□□□□ -0.68
AP001056.1-201ENST00000411956 KIR2DL4Q99706 377 aa10.81□□□□□ -0.68
AP001056.1-201ENST00000411956 TRBV25-1A0A075B6N4 114 aa10.8□□□□□ -0.68
AP001056.1-201ENST00000411956 IGHV1-24A0A0C4DH33 117 aa10.8□□□□□ -0.68
AP001056.1-201ENST00000411956 AMTP48728 403 aa10.8□□□□□ -0.68
AP001056.1-201ENST00000411956 WFDC10BQ8IUB3 73 aa10.8□□□□□ -0.68
AP001056.1-201ENST00000411956 Q8N8P6 123 aa10.8□□□□□ -0.68
AP001056.1-201ENST00000411956 ALMS1Q8TCU4 4167 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms