RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 LRRK2Q5S007 2527 aa11.69□□□□□ -0.54
HOXD3-202ENST00000410016 ZNF462Q96JM2 2506 aa11.69□□□□□ -0.54
HOXD3-202ENST00000410016 PRB1P04280 392 aa11.68□□□□□ -0.54
HOXD3-202ENST00000410016 SCGB1D4Q6XE38 83 aa11.68□□□□□ -0.54
HOXD3-202ENST00000410016 RHOHQ15669 191 aa11.68□□□□□ -0.54
HOXD3-202ENST00000410016 OPRPNQ99935 248 aaPredicted RBP11.68□□□□□ -0.54
HOXD3-202ENST00000410016 A0A0J9YY99 117 aa11.67□□□□□ -0.54
HOXD3-202ENST00000410016 TSPEAR-AS2P59090 65 aa11.67□□□□□ -0.54
HOXD3-202ENST00000410016 HERVK_113P61574 105 aa11.67□□□□□ -0.54
HOXD3-202ENST00000410016 TRGV11A0A075B6L2 103 aa11.67□□□□□ -0.54
HOXD3-202ENST00000410016 KNCNA6PVL3 124 aa11.67□□□□□ -0.54
HOXD3-202ENST00000410016 H3BMG7 143 aa11.67□□□□□ -0.54
HOXD3-202ENST00000410016 UBE2D1P51668 147 aa11.67□□□□□ -0.54
HOXD3-202ENST00000410016 SLURP1P55000 103 aa11.67□□□□□ -0.54
HOXD3-202ENST00000410016 DEFB136Q30KP8 78 aa11.67□□□□□ -0.54
HOXD3-202ENST00000410016 A8MTW9 85 aa11.66□□□□□ -0.54
HOXD3-202ENST00000410016 F8W1H4 67 aa11.66□□□□□ -0.54
HOXD3-202ENST00000410016 KRTAP10-9P60411 292 aa11.66□□□□□ -0.54
HOXD3-202ENST00000410016 NFE4Q86UQ8 179 aa11.66□□□□□ -0.54
HOXD3-202ENST00000410016 C20orf203Q8NBC4 194 aa11.66□□□□□ -0.54
HOXD3-202ENST00000410016 AMELXQ99217 191 aa11.66□□□□□ -0.54
HOXD3-202ENST00000410016 SIGMAR1Q99720 223 aa11.66□□□□□ -0.54
HOXD3-202ENST00000410016 SRSF9Q13242 221 aaKnown RBP eCLIP11.65□□□□□ -0.54
HOXD3-202ENST00000410016 WFDC2Q14508 124 aa11.65□□□□□ -0.54
HOXD3-202ENST00000410016 TMEM170BQ5T4T1 132 aa11.65□□□□□ -0.54
HOXD3-202ENST00000410016 Q8N2B8 174 aa11.65□□□□□ -0.54
HOXD3-202ENST00000410016 TEX15Q9BXT5 2789 aa11.65□□□□□ -0.54
HOXD3-202ENST00000410016 TEX48A0A1B0GUV7 120 aa11.65□□□□□ -0.54
HOXD3-202ENST00000410016 I3L3M4 83 aa11.65□□□□□ -0.54
HOXD3-202ENST00000410016 CRYBA4P53673 196 aa11.65□□□□□ -0.54
HOXD3-202ENST00000410016 DEFB131AP59861 70 aa11.65□□□□□ -0.54
HOXD3-202ENST00000410016 H3BMM0 161 aa11.64□□□□□ -0.55
HOXD3-202ENST00000410016 RBMY1BA6NDE4 496 aaKnown RBP11.64□□□□□ -0.55
HOXD3-202ENST00000410016 RBMY1EA6NEQ0 496 aaKnown RBP11.64□□□□□ -0.55
HOXD3-202ENST00000410016 RBMY1DP0C7P1 496 aaKnown RBP11.64□□□□□ -0.55
HOXD3-202ENST00000410016 RPL24P83731 157 aaKnown RBP11.64□□□□□ -0.55
HOXD3-202ENST00000410016 BBC3Q96PG8 261 aaPredicted RBP11.64□□□□□ -0.55
HOXD3-202ENST00000410016 EDA2RQ9HAV5 297 aa11.64□□□□□ -0.55
HOXD3-202ENST00000410016 USP24Q9UPU5 2620 aa11.64□□□□□ -0.55
HOXD3-202ENST00000410016 UBR5O95071 2799 aaPredicted RBP11.64□□□□□ -0.55
HOXD3-202ENST00000410016 PRM2P04554 102 aa11.63□□□□□ -0.55
HOXD3-202ENST00000410016 PGPEP1Q9NXJ5 209 aa11.63□□□□□ -0.55
HOXD3-202ENST00000410016 PRO0461Q9UI25 63 aa11.63□□□□□ -0.55
HOXD3-202ENST00000410016 NAV2Q8IVL1 2488 aa11.63□□□□□ -0.55
HOXD3-202ENST00000410016 CR1P17927 2039 aa11.63□□□□□ -0.55
HOXD3-202ENST00000410016 SLC25A29Q8N8R3 303 aa11.63□□□□□ -0.55
HOXD3-202ENST00000410016 ZNF469Q96JG9 3925 aaPredicted RBP11.63□□□□□ -0.55
HOXD3-202ENST00000410016 HTN1P15515 57 aa11.62□□□□□ -0.55
HOXD3-202ENST00000410016 SPAG8Q99932 426 aaPredicted RBP11.62□□□□□ -0.55
HOXD3-202ENST00000410016 SPANXB1Q9NS25 103 aaPredicted RBP11.62□□□□□ -0.55
HOXD3-202ENST00000410016 TRAV26-1A0A087WT03 109 aa11.62□□□□□ -0.55
HOXD3-202ENST00000410016 J3QQQ9 107 aa11.62□□□□□ -0.55
HOXD3-202ENST00000410016 PROK1P58294 105 aa11.62□□□□□ -0.55
HOXD3-202ENST00000410016 TMEM61Q8N0U2 210 aa11.62□□□□□ -0.55
HOXD3-202ENST00000410016 ABCA12Q86UK0 2595 aa11.62□□□□□ -0.55
HOXD3-202ENST00000410016 IGLV4-3A0A075B6K6 122 aa11.61□□□□□ -0.55
HOXD3-202ENST00000410016 IGHV3-30P01768 117 aa11.61□□□□□ -0.55
HOXD3-202ENST00000410016 IGHV3-30-5P0DP03 117 aa11.61□□□□□ -0.55
HOXD3-202ENST00000410016 AZU1P20160 251 aa11.61□□□□□ -0.55
HOXD3-202ENST00000410016 FAM104AQ969W3 186 aa11.61□□□□□ -0.55
HOXD3-202ENST00000410016 PRRC2AP48634 2157 aaKnown RBP11.61□□□□□ -0.55
HOXD3-202ENST00000410016 TMEM223A0PJW6 202 aa11.61□□□□□ -0.55
HOXD3-202ENST00000410016 CKS1BP61024 79 aa11.61□□□□□ -0.55
HOXD3-202ENST00000410016 DUX3Q96PT4 197 aa11.61□□□□□ -0.55
HOXD3-202ENST00000410016 MRPL16Q9NX20 251 aaKnown RBP11.61□□□□□ -0.55
HOXD3-202ENST00000410016 IGHV3-73A0A0B4J1V6 119 aa11.6□□□□□ -0.55
HOXD3-202ENST00000410016 TRAV2A0A0B4J234 112 aa11.6□□□□□ -0.55
HOXD3-202ENST00000410016 MYO9AB2RTY4 2548 aa11.6□□□□□ -0.55
HOXD3-202ENST00000410016 DEFB113Q30KQ7 82 aa11.6□□□□□ -0.55
HOXD3-202ENST00000410016 GAGE13Q4V321 117 aa11.6□□□□□ -0.55
HOXD3-202ENST00000410016 NDUFA11Q86Y39 141 aa11.6□□□□□ -0.55
HOXD3-202ENST00000410016 Q9UF83 564 aa11.6□□□□□ -0.55
HOXD3-202ENST00000410016 TSPAN13O95857 204 aa11.59□□□□□ -0.55
HOXD3-202ENST00000410016 ZNF22P17026 224 aaPredicted RBP11.59□□□□□ -0.55
HOXD3-202ENST00000410016 SH2D6Q7Z4S9 175 aa11.59□□□□□ -0.55
HOXD3-202ENST00000410016 C4orf3Q8WVX3 66 aa11.59□□□□□ -0.55
HOXD3-202ENST00000410016 DLX4Q92988 240 aaPredicted RBP11.59□□□□□ -0.55
HOXD3-202ENST00000410016 VCX2Q9H322 139 aa11.59□□□□□ -0.55
HOXD3-202ENST00000410016 A0A0J9YXV3 536 aa11.58□□□□□ -0.56
HOXD3-202ENST00000410016 M0R2P5 195 aa11.58□□□□□ -0.56
HOXD3-202ENST00000410016 RHODO00212 210 aa11.58□□□□□ -0.56
HOXD3-202ENST00000410016 LEPROTO15243 131 aa11.58□□□□□ -0.56
HOXD3-202ENST00000410016 ETDBQ3ZM63 59 aa11.58□□□□□ -0.56
HOXD3-202ENST00000410016 Q6ZSN1 163 aa11.58□□□□□ -0.56
HOXD3-202ENST00000410016 PEMTQ9UBM1 199 aa11.58□□□□□ -0.56
HOXD3-202ENST00000410016 PYGO1Q9Y3Y4 419 aa11.58□□□□□ -0.56
HOXD3-202ENST00000410016 APOMO95445 188 aa11.57□□□□□ -0.56
HOXD3-202ENST00000410016 CFC1BP0CG36 223 aa11.57□□□□□ -0.56
HOXD3-202ENST00000410016 CFC1P0CG37 223 aa11.57□□□□□ -0.56
HOXD3-202ENST00000410016 LGALS3P17931 250 aaKnown RBP11.57□□□□□ -0.56
HOXD3-202ENST00000410016 UBE2D3P61077 147 aa11.57□□□□□ -0.56
HOXD3-202ENST00000410016 UBE2D2P62837 147 aa11.57□□□□□ -0.56
HOXD3-202ENST00000410016 PIK3CD-AS1Q5SR53 167 aa11.57□□□□□ -0.56
HOXD3-202ENST00000410016 A8MWV9 139 aa11.57□□□□□ -0.56
HOXD3-202ENST00000410016 MAP6D1Q9H9H5 199 aa11.57□□□□□ -0.56
HOXD3-202ENST00000410016 AKAP9Q99996 3911 aa11.57□□□□□ -0.56
HOXD3-202ENST00000410016 LRRC75A-AS1Q8N1F1 130 aa11.56□□□□□ -0.56
HOXD3-202ENST00000410016 ZNF843Q8N446 348 aa11.56□□□□□ -0.56
HOXD3-202ENST00000410016 PTH2Q96A98 100 aa11.56□□□□□ -0.56
HOXD3-202ENST00000410016 DEFB114Q30KQ6 69 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms