RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 RPL18AQ02543 176 aaKnown RBP6.9□□□□□ -1.3
PBRM1-208ENST00000410007 PPDPFLQ8WWR9 84 aa6.9□□□□□ -1.3
PBRM1-208ENST00000410007 ALPK3Q96L96 1907 aa6.9□□□□□ -1.31
PBRM1-208ENST00000410007 TRAV12-1A0A0B4J245 112 aa6.9□□□□□ -1.31
PBRM1-208ENST00000410007 C1orf229Q6ZS94 237 aaPredicted RBP6.9□□□□□ -1.31
PBRM1-208ENST00000410007 Q6ZVH6 145 aa6.9□□□□□ -1.31
PBRM1-208ENST00000410007 SMIM9A6NGZ8 99 aa6.89□□□□□ -1.31
PBRM1-208ENST00000410007 F8W1H4 67 aa6.89□□□□□ -1.31
PBRM1-208ENST00000410007 CFC1BP0CG36 223 aa6.89□□□□□ -1.31
PBRM1-208ENST00000410007 CFC1P0CG37 223 aa6.89□□□□□ -1.31
PBRM1-208ENST00000410007 COX7B2Q8TF08 81 aa6.89□□□□□ -1.31
PBRM1-208ENST00000410007 VSIG2Q96IQ7 327 aa6.89□□□□□ -1.31
PBRM1-208ENST00000410007 SORL1Q92673 2214 aa6.89□□□□□ -1.31
PBRM1-208ENST00000410007 NDUFA1O15239 70 aa6.89□□□□□ -1.31
PBRM1-208ENST00000410007 C12orf74Q32Q52 190 aa6.89□□□□□ -1.31
PBRM1-208ENST00000410007 ETDCA0A1B0GVM5 59 aa6.89□□□□□ -1.31
PBRM1-208ENST00000410007 CXCL5P42830 114 aa6.89□□□□□ -1.31
PBRM1-208ENST00000410007 HIST2H2BCQ6DN03 193 aa6.89□□□□□ -1.31
PBRM1-208ENST00000410007 NACAE9PAV3 2078 aa6.89□□□□□ -1.31
PBRM1-208ENST00000410007 CARD19Q96LW7 228 aa6.89□□□□□ -1.31
PBRM1-208ENST00000410007 CEP192Q8TEP8 1941 aa6.89□□□□□ -1.31
PBRM1-208ENST00000410007 A0A1W2PPM0 123 aa6.88□□□□□ -1.31
PBRM1-208ENST00000410007 RPL39P62891 51 aaKnown RBP6.88□□□□□ -1.31
PBRM1-208ENST00000410007 PCP2Q8IVA1 136 aa6.88□□□□□ -1.31
PBRM1-208ENST00000410007 TOMM6Q96B49 74 aa6.88□□□□□ -1.31
PBRM1-208ENST00000410007 K7EP34 96 aa6.88□□□□□ -1.31
PBRM1-208ENST00000410007 PCNX3Q9H6A9 2034 aa6.88□□□□□ -1.31
PBRM1-208ENST00000410007 TIRAPP58753 221 aa6.88□□□□□ -1.31
PBRM1-208ENST00000410007 ZNF124Q15973 351 aa6.88□□□□□ -1.31
PBRM1-208ENST00000410007 C11orf45Q8TAV5 145 aa6.88□□□□□ -1.31
PBRM1-208ENST00000410007 PSMG3-AS1Q96PY0 264 aa6.88□□□□□ -1.31
PBRM1-208ENST00000410007 ETDBQ3ZM63 59 aa6.87□□□□□ -1.31
PBRM1-208ENST00000410007 SND1-IT1Q9HBX3 110 aa6.87□□□□□ -1.31
PBRM1-208ENST00000410007 KLK12Q9UKR0 248 aa6.87□□□□□ -1.31
PBRM1-208ENST00000410007 LYRM9A8MSI8 78 aa6.87□□□□□ -1.31
PBRM1-208ENST00000410007 LY6G6DO95868 133 aa6.87□□□□□ -1.31
PBRM1-208ENST00000410007 MAJINQ3KP22 176 aa6.87□□□□□ -1.31
PBRM1-208ENST00000410007 C20orf203Q8NBC4 194 aa6.87□□□□□ -1.31
PBRM1-208ENST00000410007 MYO9AB2RTY4 2548 aa6.87□□□□□ -1.31
PBRM1-208ENST00000410007 HAMPP81172 84 aa6.87□□□□□ -1.31
PBRM1-208ENST00000410007 K7ERJ3 54 aa6.87□□□□□ -1.31
PBRM1-208ENST00000410007 IGLL5B9A064 214 aa6.86□□□□□ -1.31
PBRM1-208ENST00000410007 BAALCQ8WXS3 180 aa6.86□□□□□ -1.31
PBRM1-208ENST00000410007 ZFAND3Q9H8U3 227 aa6.86□□□□□ -1.31
PBRM1-208ENST00000410007 H0YGX0 51 aa6.86□□□□□ -1.31
PBRM1-208ENST00000410007 SPAG11BQ08648 103 aa6.86□□□□□ -1.31
PBRM1-208ENST00000410007 NUP210LQ5VU65 1888 aa6.86□□□□□ -1.31
PBRM1-208ENST00000410007 ZNF80P51504 273 aaPredicted RBP6.86□□□□□ -1.31
PBRM1-208ENST00000410007 LINC00173Q6ZV60 143 aa6.86□□□□□ -1.31
PBRM1-208ENST00000410007 ZNF295-AS1Q8N0V1 137 aa6.86□□□□□ -1.31
PBRM1-208ENST00000410007 GTSF1LQ9H1H1 148 aa6.86□□□□□ -1.31
PBRM1-208ENST00000410007 ORMDL1Q9P0S3 153 aa6.86□□□□□ -1.31
PBRM1-208ENST00000410007 PLA2G2AP14555 144 aa6.86□□□□□ -1.31
PBRM1-208ENST00000410007 Q8N6K4 173 aa6.86□□□□□ -1.31
PBRM1-208ENST00000410007 ANKRD39Q53RE8 183 aa6.85□□□□□ -1.31
PBRM1-208ENST00000410007 Q6ZTI0 123 aa6.85□□□□□ -1.31
PBRM1-208ENST00000410007 NUPR1O60356 82 aa6.85□□□□□ -1.31
PBRM1-208ENST00000410007 PSMB8P28062 276 aa6.85□□□□□ -1.31
PBRM1-208ENST00000410007 C11orf86A6NJI1 115 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 FAM222AQ5U5X8 452 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 ZNF702PQ9H963 129 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 KIR2DL5BA0A0G2JN68 375 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 KIR2DL5BA0A0G2JPC4 375 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 H3BMG7 143 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 HILS1P60008 231 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 KIR2DL5AQ8N109 375 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 SPANXDQ9BXN6 97 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 E9PLD3 99 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 K7EP13 123 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 CCL25O15444 150 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 LINC01006Q8NI28 216 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 SPATA25Q9BR10 227 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 MLST8Q9BVC4 326 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 IGLC6P0CF74 106 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 MUSTN1Q8IVN3 82 aa6.84□□□□□ -1.31
PBRM1-208ENST00000410007 TNRC6AQ8NDV7 1962 aaKnown RBP6.83□□□□□ -1.32
PBRM1-208ENST00000410007 TRAV26-1A0A087WT03 109 aa6.83□□□□□ -1.32
PBRM1-208ENST00000410007 A0A1B0GXF2 115 aa6.83□□□□□ -1.32
PBRM1-208ENST00000410007 IGLV2-8P01709 118 aa6.83□□□□□ -1.32
PBRM1-208ENST00000410007 BAALC-AS2P0C853 105 aa6.83□□□□□ -1.32
PBRM1-208ENST00000410007 OPRPNQ99935 248 aaPredicted RBP6.83□□□□□ -1.32
PBRM1-208ENST00000410007 A4D1N5 150 aa6.83□□□□□ -1.32
PBRM1-208ENST00000410007 MIFP14174 115 aa6.83□□□□□ -1.32
PBRM1-208ENST00000410007 CDSNQ15517 529 aa6.83□□□□□ -1.32
PBRM1-208ENST00000410007 DEFB105AQ8NG35 78 aa6.83□□□□□ -1.32
PBRM1-208ENST00000410007 TINCRA0A1B0GVN0 87 aa6.82□□□□□ -1.32
PBRM1-208ENST00000410007 C14orf177Q52M58 125 aa6.82□□□□□ -1.32
PBRM1-208ENST00000410007 C10orf99Q6UWK7 81 aa6.82□□□□□ -1.32
PBRM1-208ENST00000410007 HIGD1BQ9P298 99 aa6.82□□□□□ -1.32
PBRM1-208ENST00000410007 TP53TG3Q9ULZ0 132 aa6.82□□□□□ -1.32
PBRM1-208ENST00000410007 IGHV1-58A0A0C4DH39 117 aa6.82□□□□□ -1.32
PBRM1-208ENST00000410007 H3BQ85 93 aa6.82□□□□□ -1.32
PBRM1-208ENST00000410007 FUSP35637 526 aaKnown RBP eCLIP6.82□□□□□ -1.32
PBRM1-208ENST00000410007 LINC00322Q6ZN03 302 aaPredicted RBP6.82□□□□□ -1.32
PBRM1-208ENST00000410007 NTN5Q8WTR8 489 aaPredicted RBP6.82□□□□□ -1.32
PBRM1-208ENST00000410007 C20orf173Q96LM9 149 aa6.82□□□□□ -1.32
PBRM1-208ENST00000410007 ODF1Q14990 250 aa6.82□□□□□ -1.32
PBRM1-208ENST00000410007 CITED1Q99966 193 aa6.81□□□□□ -1.32
PBRM1-208ENST00000410007 ARHGAP21Q5T5U3 1957 aa6.81□□□□□ -1.32
PBRM1-208ENST00000410007 PRRC2AP48634 2157 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms