RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 TP53TG1Q9Y2A0 90 aa17.6■□□□□ 0.41
PMS1-205ENST00000409985 SELENOKQ9Y6D0 94 aa17.6■□□□□ 0.41
PMS1-205ENST00000409985 F5H697 171 aa17.59■□□□□ 0.41
PMS1-205ENST00000409985 M0QY20 66 aa17.59■□□□□ 0.41
PMS1-205ENST00000409985 CRYGDP07320 174 aa17.59■□□□□ 0.41
PMS1-205ENST00000409985 TRPT1Q86TN4 253 aaKnown RBP17.59■□□□□ 0.41
PMS1-205ENST00000409985 NIPBLQ6KC79 2804 aaeCLIP17.59■□□□□ 0.41
PMS1-205ENST00000409985 A0A087WWL8 130 aa17.58■□□□□ 0.41
PMS1-205ENST00000409985 A0A1B0GWB2 263 aa17.58■□□□□ 0.41
PMS1-205ENST00000409985 MDFICQ9P1T7 246 aa17.58■□□□□ 0.41
PMS1-205ENST00000409985 TSHBP01222 138 aa17.58■□□□□ 0.4
PMS1-205ENST00000409985 NSUN5P1Q3KNT7 163 aa17.58■□□□□ 0.4
PMS1-205ENST00000409985 HIST1H4GQ99525 98 aa17.58■□□□□ 0.4
PMS1-205ENST00000409985 PRADC1Q9BSG0 188 aa17.57■□□□□ 0.4
PMS1-205ENST00000409985 INAFM1C9JVW0 142 aa17.56■□□□□ 0.4
PMS1-205ENST00000409985 HERVK_113P61574 105 aa17.56■□□□□ 0.4
PMS1-205ENST00000409985 PIK3CD-AS1Q5SR53 167 aa17.56■□□□□ 0.4
PMS1-205ENST00000409985 WFDC12Q8WWY7 111 aa17.56■□□□□ 0.4
PMS1-205ENST00000409985 NHP2Q9NX24 153 aaKnown RBP17.56■□□□□ 0.4
PMS1-205ENST00000409985 SPINK13Q1W4C9 94 aa17.56■□□□□ 0.4
PMS1-205ENST00000409985 TCTEX1D4Q5JR98 221 aa17.56■□□□□ 0.4
PMS1-205ENST00000409985 IGLV4-69A0A075B6H9 119 aa17.55■□□□□ 0.4
PMS1-205ENST00000409985 TRAV12-2A0A075B6T6 113 aa17.55■□□□□ 0.4
PMS1-205ENST00000409985 HOXA3O43365 443 aaPredicted RBP17.55■□□□□ 0.4
PMS1-205ENST00000409985 C12orf74Q32Q52 190 aa17.54■□□□□ 0.4
PMS1-205ENST00000409985 NEGR1Q7Z3B1 354 aa17.54■□□□□ 0.4
PMS1-205ENST00000409985 PTH2Q96A98 100 aa17.54■□□□□ 0.4
PMS1-205ENST00000409985 NF1P21359 2839 aa17.54■□□□□ 0.4
PMS1-205ENST00000409985 C11orf86A6NJI1 115 aa17.53■□□□□ 0.4
PMS1-205ENST00000409985 MORN3Q6PF18 240 aaPredicted RBP17.53■□□□□ 0.4
PMS1-205ENST00000409985 IGLL5B9A064 214 aa17.52■□□□□ 0.4
PMS1-205ENST00000409985 IGKV3-20P01619 116 aa17.52■□□□□ 0.4
PMS1-205ENST00000409985 ZNF56Q15929 161 aa17.52■□□□□ 0.4
PMS1-205ENST00000409985 ZNF876PQ49A33 203 aa17.52■□□□□ 0.4
PMS1-205ENST00000409985 NAA38Q9BRA0 125 aaKnown RBP17.52■□□□□ 0.4
PMS1-205ENST00000409985 PEMTQ9UBM1 199 aa17.52■□□□□ 0.4
PMS1-205ENST00000409985 FAM74A4Q5TZK3 123 aa17.51■□□□□ 0.39
PMS1-205ENST00000409985 SPAG8Q99932 426 aaPredicted RBP17.51■□□□□ 0.39
PMS1-205ENST00000409985 TMEM86BQ8N661 226 aa17.5■□□□□ 0.39
PMS1-205ENST00000409985 TMEM238LA0A1B0GVL6 79 aa17.5■□□□□ 0.39
PMS1-205ENST00000409985 A6NJY4 79 aa17.5■□□□□ 0.39
PMS1-205ENST00000409985 ZNF815PA8K554 130 aa17.5■□□□□ 0.39
PMS1-205ENST00000409985 I3L3M4 83 aa17.5■□□□□ 0.39
PMS1-205ENST00000409985 NFE4Q86UQ8 179 aa17.5■□□□□ 0.39
PMS1-205ENST00000409985 C4orf3Q8WVX3 66 aa17.5■□□□□ 0.39
PMS1-205ENST00000409985 K7ERJ3 54 aa17.49■□□□□ 0.39
PMS1-205ENST00000409985 TEX29Q8N6K0 151 aa17.49■□□□□ 0.39
PMS1-205ENST00000409985 LINC00467Q9BRT7 94 aa17.49■□□□□ 0.39
PMS1-205ENST00000409985 RPL39P62891 51 aaKnown RBP17.48■□□□□ 0.39
PMS1-205ENST00000409985 SCGB2A2Q13296 93 aa17.48■□□□□ 0.39
PMS1-205ENST00000409985 H3BMM0 161 aa17.48■□□□□ 0.39
PMS1-205ENST00000409985 ZNF479Q96JC4 524 aa17.48■□□□□ 0.39
PMS1-205ENST00000409985 DUX5Q96PT3 197 aa17.48■□□□□ 0.39
PMS1-205ENST00000409985 C20orf203Q8NBC4 194 aa17.47■□□□□ 0.39
PMS1-205ENST00000409985 CRYBA4P53673 196 aa17.46■□□□□ 0.38
PMS1-205ENST00000409985 RNF151Q2KHN1 245 aa17.46■□□□□ 0.38
PMS1-205ENST00000409985 RRN3P1Q2M238 152 aa17.46■□□□□ 0.38
PMS1-205ENST00000409985 SPANXB1Q9NS25 103 aaPredicted RBP17.46■□□□□ 0.38
PMS1-205ENST00000409985 SLURP1P55000 103 aa17.45■□□□□ 0.38
PMS1-205ENST00000409985 DEFB131AP59861 70 aa17.45■□□□□ 0.38
PMS1-205ENST00000409985 CD300EQ496F6 205 aaPredicted RBP17.45■□□□□ 0.38
PMS1-205ENST00000409985 CLUHP3Q96NS8 147 aa17.45■□□□□ 0.38
PMS1-205ENST00000409985 A8MWV9 139 aa17.44■□□□□ 0.38
PMS1-205ENST00000409985 P0DMU3 169 aa17.44■□□□□ 0.38
PMS1-205ENST00000409985 FAM231AP0DMU4 169 aa17.44■□□□□ 0.38
PMS1-205ENST00000409985 FAM231CP0DMU5 169 aa17.44■□□□□ 0.38
PMS1-205ENST00000409985 PCP4P48539 62 aa17.44■□□□□ 0.38
PMS1-205ENST00000409985 SCGB1D4Q6XE38 83 aa17.44■□□□□ 0.38
PMS1-205ENST00000409985 VPS25Q9BRG1 176 aa17.44■□□□□ 0.38
PMS1-205ENST00000409985 PYGO1Q9Y3Y4 419 aa17.44■□□□□ 0.38
PMS1-205ENST00000409985 F8W1H4 67 aa17.43■□□□□ 0.38
PMS1-205ENST00000409985 G3V4G9 280 aa17.43■□□□□ 0.38
PMS1-205ENST00000409985 CRLF1O75462 422 aa17.43■□□□□ 0.38
PMS1-205ENST00000409985 RBMY1A1P0DJD3 496 aaKnown RBP17.43■□□□□ 0.38
PMS1-205ENST00000409985 RBMY1CP0DJD4 496 aa17.43■□□□□ 0.38
PMS1-205ENST00000409985 RBMY1FQ15415 496 aaKnown RBP17.43■□□□□ 0.38
PMS1-205ENST00000409985 ESM1Q9NQ30 184 aa17.42■□□□□ 0.38
PMS1-205ENST00000409985 KNCNA6PVL3 124 aa17.41■□□□□ 0.38
PMS1-205ENST00000409985 M0R2P5 195 aa17.41■□□□□ 0.38
PMS1-205ENST00000409985 UBE2D1P51668 147 aa17.41■□□□□ 0.38
PMS1-205ENST00000409985 ZNRF2Q8NHG8 242 aa17.41■□□□□ 0.38
PMS1-205ENST00000409985 A0A0J9YY99 117 aa17.41■□□□□ 0.38
PMS1-205ENST00000409985 ZNF415Q09FC8 603 aa17.41■□□□□ 0.38
PMS1-205ENST00000409985 SETD2Q9BYW2 2564 aaPredicted RBP17.4■□□□□ 0.38
PMS1-205ENST00000409985 SRSF9Q13242 221 aaKnown RBP eCLIP17.39■□□□□ 0.38
PMS1-205ENST00000409985 TMEM170BQ5T4T1 132 aa17.39■□□□□ 0.38
PMS1-205ENST00000409985 AGRNO00468 2067 aa17.39■□□□□ 0.38
PMS1-205ENST00000409985 TMEM61Q8N0U2 210 aa17.39■□□□□ 0.37
PMS1-205ENST00000409985 PLEKHB2Q96CS7 222 aa17.39■□□□□ 0.37
PMS1-205ENST00000409985 JMJD1CQ15652 2540 aa17.38■□□□□ 0.37
PMS1-205ENST00000409985 C18orf65Q6ZTR6 163 aa17.38■□□□□ 0.37
PMS1-205ENST00000409985 SLC25A29Q8N8R3 303 aa17.38■□□□□ 0.37
PMS1-205ENST00000409985 KLHL30-AS1Q8NEE0 82 aa17.38■□□□□ 0.37
PMS1-205ENST00000409985 DLX4Q92988 240 aaPredicted RBP17.38■□□□□ 0.37
PMS1-205ENST00000409985 SPXQ9BT56 116 aa17.38■□□□□ 0.37
PMS1-205ENST00000409985 TRAV25A0A0B4J276 109 aa17.37■□□□□ 0.37
PMS1-205ENST00000409985 RBMY1BA6NDE4 496 aaKnown RBP17.37■□□□□ 0.37
PMS1-205ENST00000409985 RBMY1EA6NEQ0 496 aaKnown RBP17.37■□□□□ 0.37
PMS1-205ENST00000409985 LEPROTO15243 131 aa17.37■□□□□ 0.37
PMS1-205ENST00000409985 SAP30O75446 220 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms