RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 TRAV12-2A0A075B6T6 113 aa5.75□□□□□ -1.49
EPHA4-203ENST00000409938 I3L3M4 83 aa5.75□□□□□ -1.49
EPHA4-203ENST00000409938 RBMY1A1P0DJD3 496 aaKnown RBP5.75□□□□□ -1.49
EPHA4-203ENST00000409938 RBMY1CP0DJD4 496 aa5.75□□□□□ -1.49
EPHA4-203ENST00000409938 GNLYP22749 145 aa5.75□□□□□ -1.49
EPHA4-203ENST00000409938 RBMY1FQ15415 496 aaKnown RBP5.75□□□□□ -1.49
EPHA4-203ENST00000409938 TMEM95Q3KNT9 176 aa5.75□□□□□ -1.49
EPHA4-203ENST00000409938 WFDC12Q8WWY7 111 aa5.75□□□□□ -1.49
EPHA4-203ENST00000409938 PTH2Q96A98 100 aa5.75□□□□□ -1.49
EPHA4-203ENST00000409938 CCL19Q99731 98 aa5.75□□□□□ -1.49
EPHA4-203ENST00000409938 ZNF688P0C7X2 276 aa5.75□□□□□ -1.49
EPHA4-203ENST00000409938 MRPS36P82909 103 aaKnown RBP5.75□□□□□ -1.49
EPHA4-203ENST00000409938 C10orf99Q6UWK7 81 aa5.75□□□□□ -1.49
EPHA4-203ENST00000409938 DEFB104AQ8WTQ1 72 aa5.75□□□□□ -1.49
EPHA4-203ENST00000409938 A0A096LNT2 108 aa5.74□□□□□ -1.49
EPHA4-203ENST00000409938 F5H697 171 aa5.74□□□□□ -1.49
EPHA4-203ENST00000409938 NACAE9PAV3 2078 aa5.74□□□□□ -1.49
EPHA4-203ENST00000409938 LOC107984156A0A0G2JMH3 177 aa5.74□□□□□ -1.49
EPHA4-203ENST00000409938 A4D1N5 150 aa5.74□□□□□ -1.49
EPHA4-203ENST00000409938 LGALS3P17931 250 aaKnown RBP5.74□□□□□ -1.49
EPHA4-203ENST00000409938 SNRPD3P62318 126 aaKnown RBP5.74□□□□□ -1.49
EPHA4-203ENST00000409938 PIK3CD-AS1Q5SR53 167 aa5.74□□□□□ -1.49
EPHA4-203ENST00000409938 ARL17AQ8IVW1 177 aa5.74□□□□□ -1.49
EPHA4-203ENST00000409938 NBASA2RRP1 2371 aa5.74□□□□□ -1.49
EPHA4-203ENST00000409938 GATA3P23771 443 aa5.73□□□□□ -1.49
EPHA4-203ENST00000409938 ZNF56Q15929 161 aa5.73□□□□□ -1.49
EPHA4-203ENST00000409938 FAM74A4Q5TZK3 123 aa5.73□□□□□ -1.49
EPHA4-203ENST00000409938 VCX2Q9H322 139 aa5.73□□□□□ -1.49
EPHA4-203ENST00000409938 AKAP9Q99996 3911 aa5.73□□□□□ -1.49
EPHA4-203ENST00000409938 XGP55808 180 aa5.73□□□□□ -1.49
EPHA4-203ENST00000409938 Q6ZUT4 128 aa5.73□□□□□ -1.49
EPHA4-203ENST00000409938 A0A0J9YXV3 536 aa5.73□□□□□ -1.49
EPHA4-203ENST00000409938 A0A0J9YXY3 114 aa5.73□□□□□ -1.49
EPHA4-203ENST00000409938 SPINK13Q1W4C9 94 aa5.73□□□□□ -1.49
EPHA4-203ENST00000409938 MUSTN1Q8IVN3 82 aa5.73□□□□□ -1.49
EPHA4-203ENST00000409938 TRGV11A0A075B6L2 103 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 B4DSR2 109 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 IGHV4-59P01825 116 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 SFTA2Q6UW10 78 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 ANKRD29Q8N6D5 301 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 ZNF418Q8TF45 676 aaPredicted RBP5.72□□□□□ -1.49
EPHA4-203ENST00000409938 A0A1B0GV72 72 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 A8MWV9 139 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 FSHBP01225 129 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 ELANEP08246 267 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 DEFB112Q30KQ8 113 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 Q5PR19 223 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 RNF183Q96D59 192 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 LINC00467Q9BRT7 94 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 SPANXDQ9BXN6 97 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 SPANXCQ9NY87 97 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 MT-ATP8P03928 68 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 IGHV3-30-3P0DP02 117 aa5.72□□□□□ -1.49
EPHA4-203ENST00000409938 TRBV30A0A0K0K1B3 111 aa5.71□□□□□ -1.5
EPHA4-203ENST00000409938 CHCHD7Q9BUK0 85 aa5.71□□□□□ -1.5
EPHA4-203ENST00000409938 CFAP46Q8IYW2 2715 aa5.71□□□□□ -1.5
EPHA4-203ENST00000409938 RBMY1BA6NDE4 496 aaKnown RBP5.71□□□□□ -1.5
EPHA4-203ENST00000409938 RBMY1EA6NEQ0 496 aaKnown RBP5.71□□□□□ -1.5
EPHA4-203ENST00000409938 RBMY1DP0C7P1 496 aaKnown RBP5.71□□□□□ -1.5
EPHA4-203ENST00000409938 ATP5J2P56134 94 aa5.71□□□□□ -1.5
EPHA4-203ENST00000409938 SPTAN1Q13813 2472 aaKnown RBP5.71□□□□□ -1.5
EPHA4-203ENST00000409938 CSMD2Q7Z408 3487 aa5.71□□□□□ -1.5
EPHA4-203ENST00000409938 COL6A6A6NMZ7 2263 aa5.71□□□□□ -1.5
EPHA4-203ENST00000409938 DOPEY2Q9Y3R5 2298 aa5.71□□□□□ -1.5
EPHA4-203ENST00000409938 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.7□□□□□ -1.5
EPHA4-203ENST00000409938 TRAV2A0A0B4J234 112 aa5.7□□□□□ -1.5
EPHA4-203ENST00000409938 TINCRA0A1B0GVN0 87 aa5.7□□□□□ -1.5
EPHA4-203ENST00000409938 UBE2E2Q96LR5 201 aa5.7□□□□□ -1.5
EPHA4-203ENST00000409938 CITED1Q99966 193 aa5.7□□□□□ -1.5
EPHA4-203ENST00000409938 ZNF702PQ9H963 129 aa5.7□□□□□ -1.5
EPHA4-203ENST00000409938 IGHV1-58A0A0C4DH39 117 aa5.7□□□□□ -1.5
EPHA4-203ENST00000409938 SLC25A20O43772 301 aa5.7□□□□□ -1.5
EPHA4-203ENST00000409938 IGKV3-20P01619 116 aa5.7□□□□□ -1.5
EPHA4-203ENST00000409938 RPL13AP40429 203 aaKnown RBP5.7□□□□□ -1.5
EPHA4-203ENST00000409938 SYNJ2BPP57105 145 aa5.7□□□□□ -1.5
EPHA4-203ENST00000409938 UBE2D4Q9Y2X8 147 aa5.7□□□□□ -1.5
EPHA4-203ENST00000409938 HOXD3P31249 432 aaPredicted RBP5.7□□□□□ -1.5
EPHA4-203ENST00000409938 PROK1P58294 105 aa5.7□□□□□ -1.5
EPHA4-203ENST00000409938 DSCR9P59020 149 aa5.7□□□□□ -1.5
EPHA4-203ENST00000409938 CKS1BP61024 79 aa5.7□□□□□ -1.5
EPHA4-203ENST00000409938 Q6ZSN1 163 aa5.7□□□□□ -1.5
EPHA4-203ENST00000409938 ERG28Q9UKR5 140 aa5.7□□□□□ -1.5
EPHA4-203ENST00000409938 IGLV5-45A0A087WSX0 123 aa5.69□□□□□ -1.5
EPHA4-203ENST00000409938 SPINK8P0C7L1 97 aa5.69□□□□□ -1.5
EPHA4-203ENST00000409938 ADAMTSL4-AS1Q5T5F5 129 aa5.69□□□□□ -1.5
EPHA4-203ENST00000409938 C11orf72Q8NBR9 251 aa5.69□□□□□ -1.5
EPHA4-203ENST00000409938 VSIG2Q96IQ7 327 aa5.69□□□□□ -1.5
EPHA4-203ENST00000409938 Q9UF83 564 aa5.69□□□□□ -1.5
EPHA4-203ENST00000409938 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.69□□□□□ -1.5
EPHA4-203ENST00000409938 MXRA5Q9NR99 2828 aa5.69□□□□□ -1.5
EPHA4-203ENST00000409938 H3BMM0 161 aa5.69□□□□□ -1.5
EPHA4-203ENST00000409938 J3QLI3 93 aa5.69□□□□□ -1.5
EPHA4-203ENST00000409938 BEAN1Q3B7T3 259 aa5.69□□□□□ -1.5
EPHA4-203ENST00000409938 RAX2Q96IS3 184 aa5.69□□□□□ -1.5
EPHA4-203ENST00000409938 TIMM21Q9BVV7 248 aa5.69□□□□□ -1.5
EPHA4-203ENST00000409938 SPANXA1Q9NS26 97 aa5.69□□□□□ -1.5
EPHA4-203ENST00000409938 FBN2P35556 2912 aa5.69□□□□□ -1.5
EPHA4-203ENST00000409938 TIMM17BO60830 172 aa5.69□□□□□ -1.5
EPHA4-203ENST00000409938 TRIAP1O43715 76 aa5.68□□□□□ -1.5
EPHA4-203ENST00000409938 MIAQ16674 131 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms