RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 Q8N976 141 aa5.65□□□□□ -1.51
SH3D19-203ENST00000409598 SHANK1Q9Y566 2161 aa5.65□□□□□ -1.51
SH3D19-203ENST00000409598 D6R8Y8 96 aa5.65□□□□□ -1.51
SH3D19-203ENST00000409598 YPEL4Q96NS1 127 aa5.65□□□□□ -1.51
SH3D19-203ENST00000409598 F8P00451 2351 aa5.65□□□□□ -1.51
SH3D19-203ENST00000409598 NUP210LQ5VU65 1888 aa5.65□□□□□ -1.51
SH3D19-203ENST00000409598 TRBV7-3A0A075B6L6 115 aa5.64□□□□□ -1.51
SH3D19-203ENST00000409598 A0A1W2PPM0 123 aa5.64□□□□□ -1.51
SH3D19-203ENST00000409598 PRSS46E5RG02 174 aa5.64□□□□□ -1.51
SH3D19-203ENST00000409598 LINC00322Q6ZN03 302 aaPredicted RBP5.64□□□□□ -1.51
SH3D19-203ENST00000409598 CHAC1Q9BUX1 264 aa5.64□□□□□ -1.51
SH3D19-203ENST00000409598 NDUFA12Q9UI09 145 aa5.64□□□□□ -1.51
SH3D19-203ENST00000409598 SMIM27A0A1W2PRY6 76 aa5.64□□□□□ -1.51
SH3D19-203ENST00000409598 MED12LQ86YW9 2145 aa5.64□□□□□ -1.51
SH3D19-203ENST00000409598 K7EN84 100 aa5.64□□□□□ -1.51
SH3D19-203ENST00000409598 LEPROTO15243 131 aa5.64□□□□□ -1.51
SH3D19-203ENST00000409598 RBX1P62877 108 aa5.64□□□□□ -1.51
SH3D19-203ENST00000409598 C9orf47Q6ZRZ4 202 aa5.64□□□□□ -1.51
SH3D19-203ENST00000409598 TRAV8-4A0A0B4J246 113 aa5.63□□□□□ -1.51
SH3D19-203ENST00000409598 ETDBQ3ZM63 59 aa5.63□□□□□ -1.51
SH3D19-203ENST00000409598 ETDCA0A1B0GVM5 59 aa5.63□□□□□ -1.51
SH3D19-203ENST00000409598 TIMM21Q9BVV7 248 aa5.63□□□□□ -1.51
SH3D19-203ENST00000409598 GNRH2O43555 120 aa5.63□□□□□ -1.51
SH3D19-203ENST00000409598 SCGB1A1P11684 91 aa5.63□□□□□ -1.51
SH3D19-203ENST00000409598 DOCK11Q5JSL3 2073 aa5.63□□□□□ -1.51
SH3D19-203ENST00000409598 WNK1Q9H4A3 2382 aa5.63□□□□□ -1.51
SH3D19-203ENST00000409598 F8W1H4 67 aa5.63□□□□□ -1.51
SH3D19-203ENST00000409598 PMVKQ15126 192 aa5.63□□□□□ -1.51
SH3D19-203ENST00000409598 TAL2Q16559 108 aa5.63□□□□□ -1.51
SH3D19-203ENST00000409598 CT83Q5H943 113 aa5.63□□□□□ -1.51
SH3D19-203ENST00000409598 LINC00474Q9P2X8 69 aa5.63□□□□□ -1.51
SH3D19-203ENST00000409598 A0A0U1RRA0 63 aa5.62□□□□□ -1.51
SH3D19-203ENST00000409598 TAX1BP3O14907 124 aa5.62□□□□□ -1.51
SH3D19-203ENST00000409598 Q8N1Y9 231 aa5.62□□□□□ -1.51
SH3D19-203ENST00000409598 CEMP1Q6PRD7 247 aaPredicted RBP5.62□□□□□ -1.51
SH3D19-203ENST00000409598 ASPHD1Q5U4P2 390 aa5.62□□□□□ -1.51
SH3D19-203ENST00000409598 SPANXA1Q9NS26 97 aa5.62□□□□□ -1.51
SH3D19-203ENST00000409598 ARHGAP21Q5T5U3 1957 aa5.62□□□□□ -1.51
SH3D19-203ENST00000409598 MED14OSP0DP75 135 aa5.61□□□□□ -1.51
SH3D19-203ENST00000409598 CXCL5P42830 114 aa5.61□□□□□ -1.51
SH3D19-203ENST00000409598 C18orf65Q6ZTR6 163 aa5.61□□□□□ -1.51
SH3D19-203ENST00000409598 Q8N2B8 174 aa5.61□□□□□ -1.51
SH3D19-203ENST00000409598 SMIM2Q9BVW6 85 aa5.61□□□□□ -1.51
SH3D19-203ENST00000409598 IGLV10-54A0A075B6I4 117 aa5.61□□□□□ -1.51
SH3D19-203ENST00000409598 IGLV5-52A0A0A0MRZ9 124 aa5.61□□□□□ -1.51
SH3D19-203ENST00000409598 FHL3Q13643 280 aa5.61□□□□□ -1.51
SH3D19-203ENST00000409598 PROP1O75360 226 aa5.61□□□□□ -1.51
SH3D19-203ENST00000409598 FXYD5Q96DB9 178 aa5.61□□□□□ -1.51
SH3D19-203ENST00000409598 C20orf78Q9BR46 151 aa5.61□□□□□ -1.51
SH3D19-203ENST00000409598 LRCOL1A6NCL2 159 aa5.61□□□□□ -1.51
SH3D19-203ENST00000409598 FAM229AH3BQW9 127 aa5.61□□□□□ -1.51
SH3D19-203ENST00000409598 ZC2HC1BQ5TFG8 222 aa5.61□□□□□ -1.51
SH3D19-203ENST00000409598 C11orf52Q96A22 123 aa5.61□□□□□ -1.51
SH3D19-203ENST00000409598 SS18L2Q9UHA2 77 aa5.61□□□□□ -1.51
SH3D19-203ENST00000409598 PRR20EP86478 221 aa5.6□□□□□ -1.51
SH3D19-203ENST00000409598 PRR20CP86479 221 aa5.6□□□□□ -1.51
SH3D19-203ENST00000409598 PRR20DP86480 221 aa5.6□□□□□ -1.51
SH3D19-203ENST00000409598 PRR20BP86481 221 aa5.6□□□□□ -1.51
SH3D19-203ENST00000409598 PRR20AP86496 221 aa5.6□□□□□ -1.51
SH3D19-203ENST00000409598 OVOL2Q9BRP0 275 aa5.6□□□□□ -1.51
SH3D19-203ENST00000409598 KLF12Q9Y4X4 402 aa5.6□□□□□ -1.51
SH3D19-203ENST00000409598 DOPEY1Q5JWR5 2465 aa5.6□□□□□ -1.51
SH3D19-203ENST00000409598 K7ERJ3 54 aa5.6□□□□□ -1.51
SH3D19-203ENST00000409598 BRI3O95415 125 aa5.6□□□□□ -1.51
SH3D19-203ENST00000409598 CRIP2P52943 208 aaPredicted RBP5.6□□□□□ -1.51
SH3D19-203ENST00000409598 IGKV2-24A0A0C4DH68 120 aa5.6□□□□□ -1.51
SH3D19-203ENST00000409598 PFN2P35080 140 aa5.6□□□□□ -1.51
SH3D19-203ENST00000409598 RETNQ9HD89 108 aa5.6□□□□□ -1.51
SH3D19-203ENST00000409598 MSRB1Q9NZV6 116 aa5.6□□□□□ -1.51
SH3D19-203ENST00000409598 H3BMG7 143 aa5.6□□□□□ -1.51
SH3D19-203ENST00000409598 IGHV3-64A0A075B6Q5 118 aa5.59□□□□□ -1.51
SH3D19-203ENST00000409598 IGHV4-4A0A075B6R2 117 aa5.59□□□□□ -1.51
SH3D19-203ENST00000409598 SMKR1H3BMG3 65 aa5.59□□□□□ -1.51
SH3D19-203ENST00000409598 RPL32P62910 135 aaKnown RBP5.59□□□□□ -1.51
SH3D19-203ENST00000409598 Q6ZTI0 123 aa5.59□□□□□ -1.51
SH3D19-203ENST00000409598 FAM231DQ6ZW35 169 aa5.59□□□□□ -1.51
SH3D19-203ENST00000409598 AMN1Q8IY45 258 aa5.59□□□□□ -1.51
SH3D19-203ENST00000409598 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.59□□□□□ -1.51
SH3D19-203ENST00000409598 CRYGBP07316 175 aa5.59□□□□□ -1.51
SH3D19-203ENST00000409598 MIAQ16674 131 aa5.59□□□□□ -1.51
SH3D19-203ENST00000409598 ZFP2Q6ZN57 461 aa5.59□□□□□ -1.51
SH3D19-203ENST00000409598 COL4A2P08572 1712 aa5.59□□□□□ -1.51
SH3D19-203ENST00000409598 SCRT2Q9NQ03 307 aa5.59□□□□□ -1.51
SH3D19-203ENST00000409598 Q6ZS46 218 aa5.59□□□□□ -1.52
SH3D19-203ENST00000409598 GOLGB1Q14789 3259 aaKnown RBP5.58□□□□□ -1.52
SH3D19-203ENST00000409598 SPAG11BQ08648 103 aa5.58□□□□□ -1.52
SH3D19-203ENST00000409598 LGALS9CQ6DKI2 356 aa5.58□□□□□ -1.52
SH3D19-203ENST00000409598 DEFB104AQ8WTQ1 72 aa5.58□□□□□ -1.52
SH3D19-203ENST00000409598 POLQO75417 2590 aa5.58□□□□□ -1.52
SH3D19-203ENST00000409598 TRBV6-4A0A1B0GX49 114 aa5.58□□□□□ -1.52
SH3D19-203ENST00000409598 K7EMI3 77 aa5.58□□□□□ -1.52
SH3D19-203ENST00000409598 C2orf66Q6UXQ4 117 aa5.58□□□□□ -1.52
SH3D19-203ENST00000409598 LINC00173Q6ZV60 143 aa5.58□□□□□ -1.52
SH3D19-203ENST00000409598 C17orf77Q96MU5 243 aa5.58□□□□□ -1.52
SH3D19-203ENST00000409598 NCOA6Q14686 2063 aaPredicted RBP5.58□□□□□ -1.52
SH3D19-203ENST00000409598 LELP1Q5T871 98 aa5.58□□□□□ -1.52
SH3D19-203ENST00000409598 POM121L12Q8N7R1 296 aa5.58□□□□□ -1.52
SH3D19-203ENST00000409598 C11orf1Q9H5F2 150 aa5.58□□□□□ -1.52
SH3D19-203ENST00000409598 ERG28Q9UKR5 140 aa5.58□□□□□ -1.52
SH3D19-203ENST00000409598 A0A087WZ39 114 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms