RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 ZFAND2AQ8N6M9 145 aa9.13□□□□□ -0.95
CHRNA1-205ENST00000409542 NXT2Q9NPJ8 142 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-205ENST00000409542 TRAV21A0A0B4J279 112 aa9.12□□□□□ -0.95
CHRNA1-205ENST00000409542 IGHV4-28A0A0C4DH34 117 aa9.12□□□□□ -0.95
CHRNA1-205ENST00000409542 hDV102S1A0JD36 115 aa9.12□□□□□ -0.95
CHRNA1-205ENST00000409542 PRSS29PA6NIE9 313 aa9.12□□□□□ -0.95
CHRNA1-205ENST00000409542 M0R2N4 97 aa9.12□□□□□ -0.95
CHRNA1-205ENST00000409542 LGALS9BQ3B8N2 356 aa9.12□□□□□ -0.95
CHRNA1-205ENST00000409542 PRR9Q5T870 116 aa9.12□□□□□ -0.95
CHRNA1-205ENST00000409542 PRSS47A8MTI9 375 aa9.11□□□□□ -0.95
CHRNA1-205ENST00000409542 TNFRSF6BO95407 300 aa9.11□□□□□ -0.95
CHRNA1-205ENST00000409542 CMC4P56277 68 aaPredicted RBP9.11□□□□□ -0.95
CHRNA1-205ENST00000409542 DEFB131AP59861 70 aa9.11□□□□□ -0.95
CHRNA1-205ENST00000409542 BATFQ16520 125 aa9.11□□□□□ -0.95
CHRNA1-205ENST00000409542 OR8A1Q8NGG7 326 aa9.11□□□□□ -0.95
CHRNA1-205ENST00000409542 SCRT2Q9NQ03 307 aa9.11□□□□□ -0.95
CHRNA1-205ENST00000409542 SLC25A34Q6PIV7 304 aa9.1□□□□□ -0.95
CHRNA1-205ENST00000409542 PMCHL2Q9BQD1 86 aa9.1□□□□□ -0.95
CHRNA1-205ENST00000409542 TRAV10A0A0B4J240 114 aa9.09□□□□□ -0.95
CHRNA1-205ENST00000409542 ID1P41134 155 aa9.09□□□□□ -0.95
CHRNA1-205ENST00000409542 Q8N8P6 123 aa9.09□□□□□ -0.95
CHRNA1-205ENST00000409542 IFI27L1Q96BM0 104 aa9.09□□□□□ -0.95
CHRNA1-205ENST00000409542 MRAP2Q96G30 205 aa9.09□□□□□ -0.95
CHRNA1-205ENST00000409542 CELA1Q9UNI1 258 aa9.09□□□□□ -0.95
CHRNA1-205ENST00000409542 TIMM8BQ9Y5J9 83 aaPredicted RBP9.09□□□□□ -0.95
CHRNA1-205ENST00000409542 X6R8D5 127 aa9.09□□□□□ -0.95
CHRNA1-205ENST00000409542 H0Y8G0 127 aa9.08□□□□□ -0.96
CHRNA1-205ENST00000409542 FCER1GP30273 86 aa9.08□□□□□ -0.96
CHRNA1-205ENST00000409542 GAGE1Q13065 139 aa9.08□□□□□ -0.96
CHRNA1-205ENST00000409542 SPANXN1Q5VSR9 72 aa9.08□□□□□ -0.96
CHRNA1-205ENST00000409542 GOLT1BQ9Y3E0 138 aa9.08□□□□□ -0.96
CHRNA1-205ENST00000409542 IGLV2-18A0A075B6J9 118 aa9.08□□□□□ -0.96
CHRNA1-205ENST00000409542 H3BVH4 76 aa9.08□□□□□ -0.96
CHRNA1-205ENST00000409542 EVI2AP22794 236 aa9.08□□□□□ -0.96
CHRNA1-205ENST00000409542 ASIPP42127 132 aa9.08□□□□□ -0.96
CHRNA1-205ENST00000409542 RPL11P62913 178 aaKnown RBP9.08□□□□□ -0.96
CHRNA1-205ENST00000409542 PSMG4Q5JS54 123 aa9.08□□□□□ -0.96
CHRNA1-205ENST00000409542 POM121L12Q8N7R1 296 aa9.08□□□□□ -0.96
CHRNA1-205ENST00000409542 STPG4Q8N801 248 aa9.08□□□□□ -0.96
CHRNA1-205ENST00000409542 NRACQ8N912 160 aa9.08□□□□□ -0.96
CHRNA1-205ENST00000409542 GAS8-AS1O95177 125 aa9.07□□□□□ -0.96
CHRNA1-205ENST00000409542 COX8AP10176 69 aa9.07□□□□□ -0.96
CHRNA1-205ENST00000409542 ZNF25P17030 456 aaPredicted RBP9.07□□□□□ -0.96
CHRNA1-205ENST00000409542 C12orf74Q32Q52 190 aa9.07□□□□□ -0.96
CHRNA1-205ENST00000409542 Q6ZQT7 251 aa9.07□□□□□ -0.96
CHRNA1-205ENST00000409542 DCANP1Q8TF63 244 aa9.07□□□□□ -0.96
CHRNA1-205ENST00000409542 KNCNA6PVL3 124 aa9.06□□□□□ -0.96
CHRNA1-205ENST00000409542 KLLNB2CW77 178 aa9.06□□□□□ -0.96
CHRNA1-205ENST00000409542 DLEU1O43261 78 aa9.06□□□□□ -0.96
CHRNA1-205ENST00000409542 HINT1P49773 126 aaPredicted RBP9.06□□□□□ -0.96
CHRNA1-205ENST00000409542 TRPT1Q86TN4 253 aaKnown RBP9.06□□□□□ -0.96
CHRNA1-205ENST00000409542 STHQ8IWL8 128 aa9.06□□□□□ -0.96
CHRNA1-205ENST00000409542 ODF3Q96PU9 254 aa9.06□□□□□ -0.96
CHRNA1-205ENST00000409542 TMEM208Q9BTX3 173 aa9.06□□□□□ -0.96
CHRNA1-205ENST00000409542 DEFB131BA0A096LNP1 70 aa9.05□□□□□ -0.96
CHRNA1-205ENST00000409542 NXPH4O95158 308 aa9.05□□□□□ -0.96
CHRNA1-205ENST00000409542 MIFP14174 115 aa9.05□□□□□ -0.96
CHRNA1-205ENST00000409542 GATA1P15976 413 aaPredicted RBP9.05□□□□□ -0.96
CHRNA1-205ENST00000409542 RNASE4P34096 147 aaKnown RBP9.05□□□□□ -0.96
CHRNA1-205ENST00000409542 LEPP41159 167 aa9.05□□□□□ -0.96
CHRNA1-205ENST00000409542 ANXA2RQ3ZCQ2 193 aa9.05□□□□□ -0.96
CHRNA1-205ENST00000409542 CSNK1G2-AS1Q8NCQ2 148 aa9.05□□□□□ -0.96
CHRNA1-205ENST00000409542 LRP1BQ9NZR2 4599 aa9.04□□□□□ -0.96
CHRNA1-205ENST00000409542 F6UB75 175 aa9.04□□□□□ -0.96
CHRNA1-205ENST00000409542 S100A4P26447 101 aaKnown RBP9.04□□□□□ -0.96
CHRNA1-205ENST00000409542 G0S2P27469 103 aa9.04□□□□□ -0.96
CHRNA1-205ENST00000409542 FXYD7P58549 80 aa9.04□□□□□ -0.96
CHRNA1-205ENST00000409542 DEFB1P60022 68 aa9.04□□□□□ -0.96
CHRNA1-205ENST00000409542 DPH3P1Q9H4G8 78 aa9.04□□□□□ -0.96
CHRNA1-205ENST00000409542 J3KRW8 73 aa9.03□□□□□ -0.96
CHRNA1-205ENST00000409542 M0R381 172 aa9.03□□□□□ -0.96
CHRNA1-205ENST00000409542 ATP5LO75964 103 aa9.03□□□□□ -0.96
CHRNA1-205ENST00000409542 P0DMU3 169 aa9.03□□□□□ -0.96
CHRNA1-205ENST00000409542 FAM231AP0DMU4 169 aa9.03□□□□□ -0.96
CHRNA1-205ENST00000409542 FAM231CP0DMU5 169 aa9.03□□□□□ -0.96
CHRNA1-205ENST00000409542 LAGE3Q14657 143 aa9.03□□□□□ -0.96
CHRNA1-205ENST00000409542 ORAOV1Q8WV07 137 aa9.03□□□□□ -0.96
CHRNA1-205ENST00000409542 C20orf78Q9BR46 151 aa9.03□□□□□ -0.96
CHRNA1-205ENST00000409542 PHLDA3Q9Y5J5 127 aa9.03□□□□□ -0.96
CHRNA1-205ENST00000409542 TRAV2A0A0B4J234 112 aa9.02□□□□□ -0.96
CHRNA1-205ENST00000409542 K7EMI3 77 aa9.02□□□□□ -0.96
CHRNA1-205ENST00000409542 K7EQG2 157 aa9.02□□□□□ -0.96
CHRNA1-205ENST00000409542 FGF6P10767 208 aa9.02□□□□□ -0.96
CHRNA1-205ENST00000409542 RNASE3P12724 160 aaKnown RBP9.02□□□□□ -0.96
CHRNA1-205ENST00000409542 KIR3DS1Q14943 382 aa9.02□□□□□ -0.96
CHRNA1-205ENST00000409542 ANKRD39Q53RE8 183 aa9.02□□□□□ -0.96
CHRNA1-205ENST00000409542 Q6ZR54 194 aa9.02□□□□□ -0.96
CHRNA1-205ENST00000409542 SMIM2Q9BVW6 85 aa9.02□□□□□ -0.96
CHRNA1-205ENST00000409542 TRAV26-2A0A0B4J265 109 aa9.02□□□□□ -0.97
CHRNA1-205ENST00000409542 ZNF688P0C7X2 276 aa9.02□□□□□ -0.97
CHRNA1-205ENST00000409542 SNRPD3P62318 126 aaKnown RBP9.02□□□□□ -0.97
CHRNA1-205ENST00000409542 MORN3Q6PF18 240 aaPredicted RBP9.02□□□□□ -0.97
CHRNA1-205ENST00000409542 AP1S3Q96PC3 154 aa9.02□□□□□ -0.97
CHRNA1-205ENST00000409542 C7orf71A4D174 169 aa9.01□□□□□ -0.97
CHRNA1-205ENST00000409542 PPP1R17O96001 155 aa9.01□□□□□ -0.97
CHRNA1-205ENST00000409542 ODF1Q14990 250 aa9.01□□□□□ -0.97
CHRNA1-205ENST00000409542 MPV17L2Q567V2 206 aa9.01□□□□□ -0.97
CHRNA1-205ENST00000409542 BVES-AS1Q5T3Y7 98 aa9.01□□□□□ -0.97
CHRNA1-205ENST00000409542 C2orf91Q6ZV80 131 aa9.01□□□□□ -0.97
CHRNA1-205ENST00000409542 BOD1L2Q8IYS8 172 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms