RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 RNF185Q96GF1 192 aa9.86□□□□□ -0.83
CHRNA1-204ENST00000409323 PRO0255Q9UI72 69 aa9.86□□□□□ -0.83
CHRNA1-204ENST00000409323 NCR2O95944 276 aa9.85□□□□□ -0.83
CHRNA1-204ENST00000409323 S100A8P05109 93 aa9.85□□□□□ -0.83
CHRNA1-204ENST00000409323 S100A6P06703 90 aa9.85□□□□□ -0.83
CHRNA1-204ENST00000409323 GYPEP15421 78 aa9.85□□□□□ -0.83
CHRNA1-204ENST00000409323 TMEM191AQ9H0A3 160 aa9.85□□□□□ -0.83
CHRNA1-204ENST00000409323 NUPR2A6NF83 97 aa9.84□□□□□ -0.83
CHRNA1-204ENST00000409323 K7EQD1 137 aa9.84□□□□□ -0.83
CHRNA1-204ENST00000409323 RAB4AP20338 218 aa9.84□□□□□ -0.83
CHRNA1-204ENST00000409323 SNRPEP62304 92 aaKnown RBP9.84□□□□□ -0.83
CHRNA1-204ENST00000409323 Q0VG73 95 aa9.84□□□□□ -0.83
CHRNA1-204ENST00000409323 SLAQ13239 276 aa9.84□□□□□ -0.83
CHRNA1-204ENST00000409323 DEFB104AQ8WTQ1 72 aa9.84□□□□□ -0.83
CHRNA1-204ENST00000409323 GAGE12JA6NER3 117 aa9.84□□□□□ -0.83
CHRNA1-204ENST00000409323 APCSP02743 223 aa9.84□□□□□ -0.83
CHRNA1-204ENST00000409323 GAGE1Q13065 139 aa9.84□□□□□ -0.83
CHRNA1-204ENST00000409323 GAGE4Q13068 117 aa9.84□□□□□ -0.83
CHRNA1-204ENST00000409323 GAGE5Q13069 117 aa9.84□□□□□ -0.83
CHRNA1-204ENST00000409323 GAGE13Q4V321 117 aa9.84□□□□□ -0.83
CHRNA1-204ENST00000409323 RPL39LQ96EH5 51 aaKnown RBP9.84□□□□□ -0.83
CHRNA1-204ENST00000409323 MRPL51Q4U2R6 128 aaKnown RBP9.83□□□□□ -0.84
CHRNA1-204ENST00000409323 CSMD3Q7Z407 3707 aa9.82□□□□□ -0.84
CHRNA1-204ENST00000409323 TRBV6-4A0A1B0GX49 114 aa9.82□□□□□ -0.84
CHRNA1-204ENST00000409323 M0QY20 66 aa9.82□□□□□ -0.84
CHRNA1-204ENST00000409323 NDUFA6P56556 154 aa9.82□□□□□ -0.84
CHRNA1-204ENST00000409323 RHOHQ15669 191 aa9.82□□□□□ -0.84
CHRNA1-204ENST00000409323 KIAA1644Q3SXP7 199 aa9.82□□□□□ -0.84
CHRNA1-204ENST00000409323 CASC10Q5T4H9 136 aa9.82□□□□□ -0.84
CHRNA1-204ENST00000409323 FAM104BQ5XKR9 115 aa9.82□□□□□ -0.84
CHRNA1-204ENST00000409323 PRADC1Q9BSG0 188 aa9.82□□□□□ -0.84
CHRNA1-204ENST00000409323 OR10J3Q5JRS4 329 aa9.81□□□□□ -0.84
CHRNA1-204ENST00000409323 NEXN-AS1Q8NBZ9 246 aa9.81□□□□□ -0.84
CHRNA1-204ENST00000409323 ZNRF2Q8NHG8 242 aa9.81□□□□□ -0.84
CHRNA1-204ENST00000409323 KLK5Q9Y337 293 aaPredicted RBP9.81□□□□□ -0.84
CHRNA1-204ENST00000409323 DNAH7Q8WXX0 4024 aa9.8□□□□□ -0.84
CHRNA1-204ENST00000409323 IGHV3-38A0A0C4DH36 116 aa9.8□□□□□ -0.84
CHRNA1-204ENST00000409323 CIDEAO60543 219 aa9.8□□□□□ -0.84
CHRNA1-204ENST00000409323 ESDP10768 282 aa9.8□□□□□ -0.84
CHRNA1-204ENST00000409323 ALKBH7Q9BT30 221 aaPredicted RBP9.8□□□□□ -0.84
CHRNA1-204ENST00000409323 D6R8Y8 96 aa9.8□□□□□ -0.84
CHRNA1-204ENST00000409323 APLNQ9ULZ1 77 aa9.8□□□□□ -0.84
CHRNA1-204ENST00000409323 ICOSQ9Y6W8 199 aa9.8□□□□□ -0.84
CHRNA1-204ENST00000409323 IFITM10A6NMD0 228 aa9.79□□□□□ -0.84
CHRNA1-204ENST00000409323 SRIP30626 198 aa9.79□□□□□ -0.84
CHRNA1-204ENST00000409323 NEGR1Q7Z3B1 354 aa9.79□□□□□ -0.84
CHRNA1-204ENST00000409323 HIST3H2BBQ8N257 126 aa9.79□□□□□ -0.84
CHRNA1-204ENST00000409323 STARD9Q9P2P6 4700 aa9.78□□□□□ -0.84
CHRNA1-204ENST00000409323 C3orf84H3BNL1 204 aa9.78□□□□□ -0.84
CHRNA1-204ENST00000409323 CKS2P33552 79 aa9.78□□□□□ -0.84
CHRNA1-204ENST00000409323 H7C1H1 209 aa9.77□□□□□ -0.85
CHRNA1-204ENST00000409323 LINC00310P59036 64 aa9.77□□□□□ -0.85
CHRNA1-204ENST00000409323 RPL36AP83881 106 aaKnown RBP9.77□□□□□ -0.85
CHRNA1-204ENST00000409323 MRPL23Q16540 153 aaKnown RBP9.77□□□□□ -0.85
CHRNA1-204ENST00000409323 RPL36ALQ969Q0 106 aaKnown RBP9.77□□□□□ -0.85
CHRNA1-204ENST00000409323 MRAP2Q96G30 205 aa9.77□□□□□ -0.85
CHRNA1-204ENST00000409323 PACRGQ96M98 296 aaPredicted RBP9.77□□□□□ -0.85
CHRNA1-204ENST00000409323 TNFRSF18Q9Y5U5 241 aa9.77□□□□□ -0.85
CHRNA1-204ENST00000409323 TENM2Q9NT68 2774 aa9.77□□□□□ -0.85
CHRNA1-204ENST00000409323 TRBV7-3A0A075B6L6 115 aa9.76□□□□□ -0.85
CHRNA1-204ENST00000409323 NPYP01303 97 aa9.76□□□□□ -0.85
CHRNA1-204ENST00000409323 C15orf53Q8NAA6 179 aa9.76□□□□□ -0.85
CHRNA1-204ENST00000409323 C18orf32Q8TCD1 76 aa9.76□□□□□ -0.85
CHRNA1-204ENST00000409323 NIT2Q9NQR4 276 aa9.76□□□□□ -0.85
CHRNA1-204ENST00000409323 TRBV10-1A0A0K0K1A3 114 aa9.75□□□□□ -0.85
CHRNA1-204ENST00000409323 H3BNG1 76 aa9.75□□□□□ -0.85
CHRNA1-204ENST00000409323 LINC00694P0DN24 101 aa9.75□□□□□ -0.85
CHRNA1-204ENST00000409323 NRACQ8N912 160 aa9.75□□□□□ -0.85
CHRNA1-204ENST00000409323 ATP6V0E2Q8NHE4 81 aa9.75□□□□□ -0.85
CHRNA1-204ENST00000409323 UBE2D3P61077 147 aa9.75□□□□□ -0.85
CHRNA1-204ENST00000409323 UBE2D2P62837 147 aa9.75□□□□□ -0.85
CHRNA1-204ENST00000409323 ESRGQ1W209 222 aa9.75□□□□□ -0.85
CHRNA1-204ENST00000409323 PRELID3AQ96N28 172 aa9.75□□□□□ -0.85
CHRNA1-204ENST00000409323 NUPR1O60356 82 aa9.74□□□□□ -0.85
CHRNA1-204ENST00000409323 TNFRSF6BO95407 300 aa9.74□□□□□ -0.85
CHRNA1-204ENST00000409323 PPBPP02775 128 aa9.74□□□□□ -0.85
CHRNA1-204ENST00000409323 ORMDL3Q8N138 153 aa9.74□□□□□ -0.85
CHRNA1-204ENST00000409323 LOC389332A0A1B0GUA5 103 aa9.73□□□□□ -0.85
CHRNA1-204ENST00000409323 SDHAF1A6NFY7 115 aa9.73□□□□□ -0.85
CHRNA1-204ENST00000409323 LYPD5Q6UWN5 251 aa9.73□□□□□ -0.85
CHRNA1-204ENST00000409323 HIST1H2BLQ99880 126 aa9.73□□□□□ -0.85
CHRNA1-204ENST00000409323 ST20Q9HBF5 79 aa9.73□□□□□ -0.85
CHRNA1-204ENST00000409323 LAMTOR2Q9Y2Q5 125 aa9.73□□□□□ -0.85
CHRNA1-204ENST00000409323 PRSS47A8MTI9 375 aa9.72□□□□□ -0.85
CHRNA1-204ENST00000409323 SERF1AO75920 110 aa9.72□□□□□ -0.85
CHRNA1-204ENST00000409323 LINC00588Q9Y4M8 146 aa9.72□□□□□ -0.85
CHRNA1-204ENST00000409323 BAGE3Q86Y29 109 aa9.71□□□□□ -0.85
CHRNA1-204ENST00000409323 UBE2DNLQ8IWF7 75 aa9.71□□□□□ -0.85
CHRNA1-204ENST00000409323 DNAJC30Q96LL9 226 aa9.71□□□□□ -0.85
CHRNA1-204ENST00000409323 SUMO2P61956 95 aaKnown RBP9.71□□□□□ -0.86
CHRNA1-204ENST00000409323 IQCJQ1A5X6 159 aa9.71□□□□□ -0.86
CHRNA1-204ENST00000409323 URB1-AS1Q96HZ7 61 aa9.71□□□□□ -0.86
CHRNA1-204ENST00000409323 TMEM70Q9BUB7 260 aa9.71□□□□□ -0.86
CHRNA1-204ENST00000409323 GTSF1LQ9H1H1 148 aa9.71□□□□□ -0.86
CHRNA1-204ENST00000409323 NTM-AS1Q6ZSK4 140 aa9.7□□□□□ -0.86
CHRNA1-204ENST00000409323 CHCHD1Q96BP2 118 aaKnown RBP9.7□□□□□ -0.86
CHRNA1-204ENST00000409323 TRBV6-5A0A0K0K1A5 114 aa9.69□□□□□ -0.86
CHRNA1-204ENST00000409323 LINC01546A6NGU7 62 aa9.69□□□□□ -0.86
CHRNA1-204ENST00000409323 LY6G6CO95867 125 aa9.69□□□□□ -0.86
CHRNA1-204ENST00000409323 PMCHP20382 165 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms