RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 IGHV1-69DA0A0B4J2H0 117 aa6.27□□□□□ -1.41
SNX13-201ENST00000409076 TCL1BO95988 128 aa6.27□□□□□ -1.41
SNX13-201ENST00000409076 IGHV1-69P01742 117 aa6.27□□□□□ -1.41
SNX13-201ENST00000409076 NTN5Q8WTR8 489 aaPredicted RBP6.27□□□□□ -1.41
SNX13-201ENST00000409076 SS18L2Q9UHA2 77 aa6.27□□□□□ -1.41
SNX13-201ENST00000409076 SLURP1P55000 103 aa6.26□□□□□ -1.41
SNX13-201ENST00000409076 LMO4P61968 165 aa6.26□□□□□ -1.41
SNX13-201ENST00000409076 DYNLRB2Q8TF09 96 aa6.26□□□□□ -1.41
SNX13-201ENST00000409076 ATP6V0BQ99437 205 aa6.26□□□□□ -1.41
SNX13-201ENST00000409076 TNFRSF18Q9Y5U5 241 aa6.26□□□□□ -1.41
SNX13-201ENST00000409076 A8MWV9 139 aa6.26□□□□□ -1.41
SNX13-201ENST00000409076 J3QQQ9 107 aa6.26□□□□□ -1.41
SNX13-201ENST00000409076 AVPP01185 164 aa6.26□□□□□ -1.41
SNX13-201ENST00000409076 GEMIN7Q9H840 131 aaKnown RBP6.26□□□□□ -1.41
SNX13-201ENST00000409076 SNRPD3P62318 126 aaKnown RBP6.26□□□□□ -1.41
SNX13-201ENST00000409076 MEIG1Q5JSS6 88 aa6.26□□□□□ -1.41
SNX13-201ENST00000409076 MUSTN1Q8IVN3 82 aa6.26□□□□□ -1.41
SNX13-201ENST00000409076 CLEC2BQ92478 149 aa6.26□□□□□ -1.41
SNX13-201ENST00000409076 DAZ1Q9NQZ3 744 aaKnown RBP6.26□□□□□ -1.41
SNX13-201ENST00000409076 IGSF10Q6WRI0 2623 aa6.25□□□□□ -1.41
SNX13-201ENST00000409076 RNASE3P12724 160 aaKnown RBP6.25□□□□□ -1.41
SNX13-201ENST00000409076 TTC32Q5I0X7 151 aa6.25□□□□□ -1.41
SNX13-201ENST00000409076 SMPXQ9UHP9 88 aa6.25□□□□□ -1.41
SNX13-201ENST00000409076 RNF223E7ERA6 249 aa6.25□□□□□ -1.41
SNX13-201ENST00000409076 OVOL1O14753 267 aa6.25□□□□□ -1.41
SNX13-201ENST00000409076 DEFB112Q30KQ8 113 aa6.25□□□□□ -1.41
SNX13-201ENST00000409076 ANKRD29Q8N6D5 301 aa6.25□□□□□ -1.41
SNX13-201ENST00000409076 ERG28Q9UKR5 140 aa6.25□□□□□ -1.41
SNX13-201ENST00000409076 MXRA5Q9NR99 2828 aa6.25□□□□□ -1.41
SNX13-201ENST00000409076 PMVKQ15126 192 aa6.25□□□□□ -1.41
SNX13-201ENST00000409076 ANAPC13Q9BS18 74 aa6.25□□□□□ -1.41
SNX13-201ENST00000409076 USP24Q9UPU5 2620 aa6.24□□□□□ -1.41
SNX13-201ENST00000409076 E9PLD3 99 aa6.24□□□□□ -1.41
SNX13-201ENST00000409076 SIVA1O15304 175 aa6.24□□□□□ -1.41
SNX13-201ENST00000409076 NDUFA7O95182 113 aa6.24□□□□□ -1.41
SNX13-201ENST00000409076 HOXD3P31249 432 aaPredicted RBP6.24□□□□□ -1.41
SNX13-201ENST00000409076 CRYBA4P53673 196 aa6.24□□□□□ -1.41
SNX13-201ENST00000409076 HIST2H2BCQ6DN03 193 aa6.24□□□□□ -1.41
SNX13-201ENST00000409076 ZNRF2Q8NHG8 242 aa6.24□□□□□ -1.41
SNX13-201ENST00000409076 A0A096LPF7 62 aa6.24□□□□□ -1.41
SNX13-201ENST00000409076 VCYO14598 125 aa6.24□□□□□ -1.41
SNX13-201ENST00000409076 NFE4Q86UQ8 179 aa6.24□□□□□ -1.41
SNX13-201ENST00000409076 ZNF575Q86XF7 245 aa6.24□□□□□ -1.41
SNX13-201ENST00000409076 ITPR3Q14573 2671 aa6.24□□□□□ -1.41
SNX13-201ENST00000409076 IGLV2-18A0A075B6J9 118 aa6.23□□□□□ -1.41
SNX13-201ENST00000409076 MORN3Q6PF18 240 aaPredicted RBP6.23□□□□□ -1.41
SNX13-201ENST00000409076 NEXN-AS1Q8NBZ9 246 aa6.23□□□□□ -1.41
SNX13-201ENST00000409076 B5MCH6 92 aa6.23□□□□□ -1.41
SNX13-201ENST00000409076 F8W1H4 67 aa6.23□□□□□ -1.41
SNX13-201ENST00000409076 GATA3P23771 443 aa6.23□□□□□ -1.41
SNX13-201ENST00000409076 C9orf47Q6ZRZ4 202 aa6.23□□□□□ -1.41
SNX13-201ENST00000409076 GPHB5Q86YW7 130 aa6.23□□□□□ -1.41
SNX13-201ENST00000409076 TOMM6Q96B49 74 aa6.23□□□□□ -1.41
SNX13-201ENST00000409076 F8P00451 2351 aa6.23□□□□□ -1.41
SNX13-201ENST00000409076 TRGV1A0A0A0MS02 117 aa6.23□□□□□ -1.41
SNX13-201ENST00000409076 SRSF2Q01130 221 aaKnown RBP6.23□□□□□ -1.41
SNX13-201ENST00000409076 FOXI1Q12951 378 aa6.23□□□□□ -1.41
SNX13-201ENST00000409076 Q8N6K4 173 aa6.23□□□□□ -1.41
SNX13-201ENST00000409076 SLC25A20O43772 301 aa6.22□□□□□ -1.41
SNX13-201ENST00000409076 RPL35AP18077 110 aaKnown RBP6.22□□□□□ -1.41
SNX13-201ENST00000409076 TCTEX1D4Q5JR98 221 aa6.22□□□□□ -1.41
SNX13-201ENST00000409076 CLPSL2Q6UWE3 100 aa6.22□□□□□ -1.41
SNX13-201ENST00000409076 IGHV4OR15-8A0A075B7B6 117 aa6.22□□□□□ -1.41
SNX13-201ENST00000409076 A0A087WW49 117 aa6.22□□□□□ -1.41
SNX13-201ENST00000409076 TEX49A0A1B0GTD5 131 aa6.22□□□□□ -1.41
SNX13-201ENST00000409076 XGP55808 180 aa6.22□□□□□ -1.41
SNX13-201ENST00000409076 C11orf71Q6IPW1 123 aa6.22□□□□□ -1.41
SNX13-201ENST00000409076 TIMM21Q9BVV7 248 aa6.22□□□□□ -1.41
SNX13-201ENST00000409076 TRBV7-3A0A075B6L6 115 aa6.22□□□□□ -1.41
SNX13-201ENST00000409076 TRBV6-1A0A0K0K1D8 114 aa6.22□□□□□ -1.41
SNX13-201ENST00000409076 SNCGO76070 127 aa6.22□□□□□ -1.41
SNX13-201ENST00000409076 RNF183Q96D59 192 aa6.22□□□□□ -1.41
SNX13-201ENST00000409076 PRO1854Q9UHT4 67 aa6.22□□□□□ -1.41
SNX13-201ENST00000409076 TM2D2Q9BX73 214 aa6.21□□□□□ -1.41
SNX13-201ENST00000409076 NDUFA4O00483 81 aa6.21□□□□□ -1.42
SNX13-201ENST00000409076 CFC1BP0CG36 223 aa6.21□□□□□ -1.42
SNX13-201ENST00000409076 CFC1P0CG37 223 aa6.21□□□□□ -1.42
SNX13-201ENST00000409076 IGHV1OR15-1A0A075B7D0 117 aa6.21□□□□□ -1.42
SNX13-201ENST00000409076 GAGE12JA6NER3 117 aa6.21□□□□□ -1.42
SNX13-201ENST00000409076 TSHBP01222 138 aa6.21□□□□□ -1.42
SNX13-201ENST00000409076 ELANEP08246 267 aa6.21□□□□□ -1.42
SNX13-201ENST00000409076 GAGE4Q13068 117 aa6.21□□□□□ -1.42
SNX13-201ENST00000409076 GAGE5Q13069 117 aa6.21□□□□□ -1.42
SNX13-201ENST00000409076 C2orf82Q6UX34 121 aa6.21□□□□□ -1.42
SNX13-201ENST00000409076 NDUFA11Q86Y39 141 aa6.21□□□□□ -1.42
SNX13-201ENST00000409076 A0A0J9YY99 117 aa6.2□□□□□ -1.42
SNX13-201ENST00000409076 MSMBP08118 114 aa6.2□□□□□ -1.42
SNX13-201ENST00000409076 OOSP1A8MZH6 123 aa6.2□□□□□ -1.42
SNX13-201ENST00000409076 TEX29Q8N6K0 151 aa6.2□□□□□ -1.42
SNX13-201ENST00000409076 OR13C6PQ8NH95 151 aa6.2□□□□□ -1.42
SNX13-201ENST00000409076 TMEM190Q8WZ59 177 aa6.2□□□□□ -1.42
SNX13-201ENST00000409076 ESM1Q9NQ30 184 aa6.2□□□□□ -1.42
SNX13-201ENST00000409076 HIGD1BQ9P298 99 aa6.2□□□□□ -1.42
SNX13-201ENST00000409076 NDUFA12Q9UI09 145 aa6.2□□□□□ -1.42
SNX13-201ENST00000409076 PPP1R17O96001 155 aa6.2□□□□□ -1.42
SNX13-201ENST00000409076 CRYGDP07320 174 aa6.2□□□□□ -1.42
SNX13-201ENST00000409076 SMCPP49901 116 aaPredicted RBP6.2□□□□□ -1.42
SNX13-201ENST00000409076 C1QTNF4Q9BXJ3 329 aa6.2□□□□□ -1.42
SNX13-201ENST00000409076 FAM223BA6NKX1 122 aa6.19□□□□□ -1.42
SNX13-201ENST00000409076 PLA2G2AP14555 144 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms