RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 HIST2H2BEQ16778 126 aa14.41□□□□□ -0.1
CHKB-201ENST00000406938 OR10J3Q5JRS4 329 aa14.41□□□□□ -0.1
CHKB-201ENST00000406938 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.41□□□□□ -0.1
CHKB-201ENST00000406938 STAB2Q8WWQ8 2551 aa14.41□□□□□ -0.1
CHKB-201ENST00000406938 HIST1H2BHQ93079 126 aa14.41□□□□□ -0.1
CHKB-201ENST00000406938 HIST1H2BNQ99877 126 aa14.41□□□□□ -0.1
CHKB-201ENST00000406938 HIST1H2BMQ99879 126 aa14.41□□□□□ -0.1
CHKB-201ENST00000406938 Q9UF83 564 aa14.41□□□□□ -0.1
CHKB-201ENST00000406938 HHLA3Q9XRX5 114 aa14.41□□□□□ -0.1
CHKB-201ENST00000406938 LAMTOR2Q9Y2Q5 125 aa14.41□□□□□ -0.1
CHKB-201ENST00000406938 F5H768 121 aa14.4□□□□□ -0.1
CHKB-201ENST00000406938 C5orf52A6NGY3 159 aa14.39□□□□□ -0.11
CHKB-201ENST00000406938 SNRPEP62304 92 aaKnown RBP14.39□□□□□ -0.11
CHKB-201ENST00000406938 RHOHQ15669 191 aa14.39□□□□□ -0.11
CHKB-201ENST00000406938 NIT2Q9NQR4 276 aa14.39□□□□□ -0.11
CHKB-201ENST00000406938 PRO0255Q9UI72 69 aa14.39□□□□□ -0.11
CHKB-201ENST00000406938 PPP1R17O96001 155 aa14.38□□□□□ -0.11
CHKB-201ENST00000406938 CRYBA4P53673 196 aa14.38□□□□□ -0.11
CHKB-201ENST00000406938 C18orf32Q8TCD1 76 aa14.38□□□□□ -0.11
CHKB-201ENST00000406938 NDUFA6P56556 154 aa14.37□□□□□ -0.11
CHKB-201ENST00000406938 IQCJQ1A5X6 159 aa14.37□□□□□ -0.11
CHKB-201ENST00000406938 NEXN-AS1Q8NBZ9 246 aa14.37□□□□□ -0.11
CHKB-201ENST00000406938 TRBV10-1A0A0K0K1A3 114 aa14.37□□□□□ -0.11
CHKB-201ENST00000406938 LOC100131303A0A0U1RQF7 123 aa14.37□□□□□ -0.11
CHKB-201ENST00000406938 PRADC1Q9BSG0 188 aa14.37□□□□□ -0.11
CHKB-201ENST00000406938 TRBV6-5A0A0K0K1A5 114 aa14.36□□□□□ -0.11
CHKB-201ENST00000406938 SUMO2P61956 95 aaKnown RBP14.36□□□□□ -0.11
CHKB-201ENST00000406938 MAP1LC3AQ9H492 121 aa14.36□□□□□ -0.11
CHKB-201ENST00000406938 ST20Q9HBF5 79 aa14.36□□□□□ -0.11
CHKB-201ENST00000406938 TRAV26-1A0A087WT03 109 aa14.35□□□□□ -0.11
CHKB-201ENST00000406938 DEFB131BA0A096LNP1 70 aa14.35□□□□□ -0.11
CHKB-201ENST00000406938 A0A0J9YY99 117 aa14.35□□□□□ -0.11
CHKB-201ENST00000406938 VSIG2Q96IQ7 327 aa14.35□□□□□ -0.11
CHKB-201ENST00000406938 C20orf78Q9BR46 151 aa14.35□□□□□ -0.11
CHKB-201ENST00000406938 TNFRSF18Q9Y5U5 241 aa14.35□□□□□ -0.11
CHKB-201ENST00000406938 LOC389332A0A1B0GUA5 103 aa14.34□□□□□ -0.11
CHKB-201ENST00000406938 PAX4O43316 350 aa14.34□□□□□ -0.11
CHKB-201ENST00000406938 GAGE12JA6NER3 117 aa14.33□□□□□ -0.11
CHKB-201ENST00000406938 SDHAF1A6NFY7 115 aa14.33□□□□□ -0.11
CHKB-201ENST00000406938 RPL36AP83881 106 aaKnown RBP14.33□□□□□ -0.11
CHKB-201ENST00000406938 GAGE1Q13065 139 aa14.33□□□□□ -0.11
CHKB-201ENST00000406938 GAGE4Q13068 117 aa14.33□□□□□ -0.11
CHKB-201ENST00000406938 GAGE5Q13069 117 aa14.33□□□□□ -0.11
CHKB-201ENST00000406938 GAGE13Q4V321 117 aa14.33□□□□□ -0.11
CHKB-201ENST00000406938 LINC00518Q8N0U6 118 aa14.33□□□□□ -0.11
CHKB-201ENST00000406938 RPL36ALQ969Q0 106 aaKnown RBP14.33□□□□□ -0.11
CHKB-201ENST00000406938 DNAJC30Q96LL9 226 aa14.33□□□□□ -0.11
CHKB-201ENST00000406938 TRBV7-3A0A075B6L6 115 aa14.33□□□□□ -0.12
CHKB-201ENST00000406938 TRAV10A0A0B4J240 114 aa14.33□□□□□ -0.12
CHKB-201ENST00000406938 GYPEP15421 78 aa14.33□□□□□ -0.12
CHKB-201ENST00000406938 Q0VG73 95 aa14.33□□□□□ -0.12
CHKB-201ENST00000406938 ZNRF2Q8NHG8 242 aa14.33□□□□□ -0.12
CHKB-201ENST00000406938 TMEM70Q9BUB7 260 aa14.33□□□□□ -0.12
CHKB-201ENST00000406938 SMIM2Q9BVW6 85 aa14.33□□□□□ -0.12
CHKB-201ENST00000406938 PRSS47A8MTI9 375 aa14.32□□□□□ -0.12
CHKB-201ENST00000406938 NEGR1Q7Z3B1 354 aa14.32□□□□□ -0.12
CHKB-201ENST00000406938 IFI27P40305 119 aaPredicted RBP14.31□□□□□ -0.12
CHKB-201ENST00000406938 LINC00694P0DN24 101 aa14.3□□□□□ -0.12
CHKB-201ENST00000406938 AKR1D1P51857 326 aa14.3□□□□□ -0.12
CHKB-201ENST00000406938 POLR2KP53803 58 aaKnown RBP14.3□□□□□ -0.12
CHKB-201ENST00000406938 BAGE3Q86Y29 109 aa14.3□□□□□ -0.12
CHKB-201ENST00000406938 SMIM6P0DI80 62 aa14.3□□□□□ -0.12
CHKB-201ENST00000406938 PMCHP20382 165 aa14.3□□□□□ -0.12
CHKB-201ENST00000406938 UBE2D3P61077 147 aa14.3□□□□□ -0.12
CHKB-201ENST00000406938 UBE2D2P62837 147 aa14.3□□□□□ -0.12
CHKB-201ENST00000406938 RPL32P62910 135 aaKnown RBP14.3□□□□□ -0.12
CHKB-201ENST00000406938 PRSS3P2Q8NHM4 247 aa14.3□□□□□ -0.12
CHKB-201ENST00000406938 IGLV2-18A0A075B6J9 118 aa14.29□□□□□ -0.12
CHKB-201ENST00000406938 TRBV27A0A0K0K1C4 114 aa14.29□□□□□ -0.12
CHKB-201ENST00000406938 PHLDA1Q8WV24 401 aaPredicted RBP14.29□□□□□ -0.12
CHKB-201ENST00000406938 URB1-AS1Q96HZ7 61 aa14.29□□□□□ -0.12
CHKB-201ENST00000406938 NXT2Q9NPJ8 142 aaKnown RBP14.29□□□□□ -0.12
CHKB-201ENST00000406938 IGHV3-38A0A0C4DH36 116 aa14.28□□□□□ -0.12
CHKB-201ENST00000406938 Q8N8P6 123 aa14.28□□□□□ -0.12
CHKB-201ENST00000406938 DEFB104AQ8WTQ1 72 aa14.28□□□□□ -0.12
CHKB-201ENST00000406938 VCYO14598 125 aa14.27□□□□□ -0.12
CHKB-201ENST00000406938 SERF1AO75920 110 aa14.27□□□□□ -0.12
CHKB-201ENST00000406938 LINC00310P59036 64 aa14.27□□□□□ -0.12
CHKB-201ENST00000406938 RNASEKQ6P5S7 137 aaKnown RBP14.27□□□□□ -0.12
CHKB-201ENST00000406938 H3BNG1 76 aa14.26□□□□□ -0.13
CHKB-201ENST00000406938 FA2HQ7L5A8 372 aa14.26□□□□□ -0.13
CHKB-201ENST00000406938 NIT1Q86X76 327 aa14.26□□□□□ -0.13
CHKB-201ENST00000406938 ICOSQ9Y6W8 199 aa14.26□□□□□ -0.13
CHKB-201ENST00000406938 I3L3M4 83 aa14.26□□□□□ -0.13
CHKB-201ENST00000406938 LINC00614P0C842 121 aa14.26□□□□□ -0.13
CHKB-201ENST00000406938 DAZ4Q86SG3 579 aaKnown RBP14.26□□□□□ -0.13
CHKB-201ENST00000406938 KIR2DL4Q99706 377 aa14.26□□□□□ -0.13
CHKB-201ENST00000406938 DAZ3Q9NR90 486 aaKnown RBP14.26□□□□□ -0.13
CHKB-201ENST00000406938 A0A096LPF7 62 aa14.25□□□□□ -0.13
CHKB-201ENST00000406938 TCAPO15273 167 aa14.25□□□□□ -0.13
CHKB-201ENST00000406938 COA6Q5JTJ3 125 aaKnown RBP14.24□□□□□ -0.13
CHKB-201ENST00000406938 AP5S1Q9NUS5 200 aa14.24□□□□□ -0.13
CHKB-201ENST00000406938 LINC01546A6NGU7 62 aa14.23□□□□□ -0.13
CHKB-201ENST00000406938 TSHBP01222 138 aa14.23□□□□□ -0.13
CHKB-201ENST00000406938 MRPL23Q16540 153 aaKnown RBP14.23□□□□□ -0.13
CHKB-201ENST00000406938 ATP6V0E2Q8NHE4 81 aa14.23□□□□□ -0.13
CHKB-201ENST00000406938 CHCHD1Q96BP2 118 aaKnown RBP14.23□□□□□ -0.13
CHKB-201ENST00000406938 NUPR1O60356 82 aa14.23□□□□□ -0.13
CHKB-201ENST00000406938 S100A2P29034 98 aa14.23□□□□□ -0.13
CHKB-201ENST00000406938 S100A12P80511 92 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms