RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 TCAPO15273 167 aa12.04□□□□□ -0.48
IRF1-202ENST00000405885 LGALS9BQ3B8N2 356 aa12.04□□□□□ -0.48
IRF1-202ENST00000405885 OR4C5Q8NGB2 326 aa12.04□□□□□ -0.48
IRF1-202ENST00000405885 RNF183Q96D59 192 aa12.04□□□□□ -0.48
IRF1-202ENST00000405885 A0A096LNJ9 63 aa12.04□□□□□ -0.48
IRF1-202ENST00000405885 IGHV4-28A0A0C4DH34 117 aa12.04□□□□□ -0.48
IRF1-202ENST00000405885 DEFB130BP0DP73 79 aa12.04□□□□□ -0.48
IRF1-202ENST00000405885 DEFB130AP0DP74 79 aa12.04□□□□□ -0.48
IRF1-202ENST00000405885 TRGV2A0A075B6R0 118 aa12.03□□□□□ -0.48
IRF1-202ENST00000405885 A8MZ25 164 aa12.03□□□□□ -0.48
IRF1-202ENST00000405885 RIPPLY3P57055 190 aa12.03□□□□□ -0.48
IRF1-202ENST00000405885 LINC00173Q6ZV60 143 aa12.03□□□□□ -0.48
IRF1-202ENST00000405885 SMIM2Q9BVW6 85 aa12.02□□□□□ -0.48
IRF1-202ENST00000405885 SMIM9A6NGZ8 99 aa12.02□□□□□ -0.49
IRF1-202ENST00000405885 Q8N8P6 123 aa12.02□□□□□ -0.49
IRF1-202ENST00000405885 Q8NAQ8 132 aa12.02□□□□□ -0.49
IRF1-202ENST00000405885 K7EIL1 84 aa12.01□□□□□ -0.49
IRF1-202ENST00000405885 PRSS47A8MTI9 375 aa12.01□□□□□ -0.49
IRF1-202ENST00000405885 FAM222AQ5U5X8 452 aa12.01□□□□□ -0.49
IRF1-202ENST00000405885 CDPF1Q6NVV7 123 aa12.01□□□□□ -0.49
IRF1-202ENST00000405885 C20orf78Q9BR46 151 aa12.01□□□□□ -0.49
IRF1-202ENST00000405885 TMEM70Q9BUB7 260 aa12.01□□□□□ -0.49
IRF1-202ENST00000405885 ST20Q9HBF5 79 aa12.01□□□□□ -0.49
IRF1-202ENST00000405885 NXT2Q9NPJ8 142 aaKnown RBP12.01□□□□□ -0.49
IRF1-202ENST00000405885 TRAV4A0A0B4J268 109 aa12□□□□□ -0.49
IRF1-202ENST00000405885 SDHAF1A6NFY7 115 aa12□□□□□ -0.49
IRF1-202ENST00000405885 RHODO00212 210 aa11.99□□□□□ -0.49
IRF1-202ENST00000405885 CELA1Q9UNI1 258 aa11.99□□□□□ -0.49
IRF1-202ENST00000405885 HUWE1Q7Z6Z7 4374 aaKnown RBP11.99□□□□□ -0.49
IRF1-202ENST00000405885 POLR2KP53803 58 aaKnown RBP11.99□□□□□ -0.49
IRF1-202ENST00000405885 ZFP2Q6ZN57 461 aa11.99□□□□□ -0.49
IRF1-202ENST00000405885 NDUFAF3Q9BU61 184 aa11.99□□□□□ -0.49
IRF1-202ENST00000405885 LINC01546A6NGU7 62 aa11.98□□□□□ -0.49
IRF1-202ENST00000405885 KPRPQ5T749 579 aaPredicted RBP11.98□□□□□ -0.49
IRF1-202ENST00000405885 SBSPONQ8IVN8 264 aa11.98□□□□□ -0.49
IRF1-202ENST00000405885 LINC00469Q8N7U9 141 aa11.98□□□□□ -0.49
IRF1-202ENST00000405885 PPP1R17O96001 155 aa11.98□□□□□ -0.49
IRF1-202ENST00000405885 MIFP14174 115 aa11.98□□□□□ -0.49
IRF1-202ENST00000405885 KRTDAPP60985 99 aa11.98□□□□□ -0.49
IRF1-202ENST00000405885 DEFB121Q5J5C9 76 aa11.98□□□□□ -0.49
IRF1-202ENST00000405885 LEPROTL1O95214 131 aa11.97□□□□□ -0.49
IRF1-202ENST00000405885 SLC25A29Q8N8R3 303 aa11.97□□□□□ -0.49
IRF1-202ENST00000405885 NEXN-AS1Q8NBZ9 246 aa11.97□□□□□ -0.49
IRF1-202ENST00000405885 MRAPQ8TCY5 172 aa11.97□□□□□ -0.49
IRF1-202ENST00000405885 DKK2Q9UBU2 259 aa11.97□□□□□ -0.49
IRF1-202ENST00000405885 TRBV6-5A0A0K0K1A5 114 aa11.96□□□□□ -0.49
IRF1-202ENST00000405885 LAGE3Q14657 143 aa11.96□□□□□ -0.49
IRF1-202ENST00000405885 LINC00612Q8N6U2 182 aa11.96□□□□□ -0.49
IRF1-202ENST00000405885 H7C1H1 209 aa11.96□□□□□ -0.5
IRF1-202ENST00000405885 C3orf79P0CE67 100 aa11.96□□□□□ -0.5
IRF1-202ENST00000405885 BTF3P20290 206 aaKnown RBP11.96□□□□□ -0.5
IRF1-202ENST00000405885 EDA2RQ9HAV5 297 aa11.96□□□□□ -0.5
IRF1-202ENST00000405885 COL7A1Q02388 2944 aa11.95□□□□□ -0.5
IRF1-202ENST00000405885 HBDP02042 147 aa11.95□□□□□ -0.5
IRF1-202ENST00000405885 C18orf15Q96N68 181 aa11.95□□□□□ -0.5
IRF1-202ENST00000405885 IGHV3-38A0A0C4DH36 116 aa11.95□□□□□ -0.5
IRF1-202ENST00000405885 TRBV27A0A0K0K1C4 114 aa11.95□□□□□ -0.5
IRF1-202ENST00000405885 LOC100131303A0A0U1RQF7 123 aa11.95□□□□□ -0.5
IRF1-202ENST00000405885 FHL2Q14192 279 aa11.95□□□□□ -0.5
IRF1-202ENST00000405885 SPATA12Q7Z6I5 190 aa11.95□□□□□ -0.5
IRF1-202ENST00000405885 H0Y8G0 127 aa11.94□□□□□ -0.5
IRF1-202ENST00000405885 VCYO14598 125 aa11.94□□□□□ -0.5
IRF1-202ENST00000405885 TNFRSF18Q9Y5U5 241 aa11.94□□□□□ -0.5
IRF1-202ENST00000405885 TRGV4A0A0C4DH28 118 aa11.93□□□□□ -0.5
IRF1-202ENST00000405885 NUDT3O95989 172 aa11.93□□□□□ -0.5
IRF1-202ENST00000405885 FCER1GP30273 86 aa11.93□□□□□ -0.5
IRF1-202ENST00000405885 PHLDA1Q8WV24 401 aaPredicted RBP11.93□□□□□ -0.5
IRF1-202ENST00000405885 K7EQD1 137 aa11.93□□□□□ -0.5
IRF1-202ENST00000405885 PKIAP61925 76 aa11.93□□□□□ -0.5
IRF1-202ENST00000405885 JOSD1Q15040 202 aaPredicted RBP11.93□□□□□ -0.5
IRF1-202ENST00000405885 ZNRF2Q8NHG8 242 aa11.93□□□□□ -0.5
IRF1-202ENST00000405885 LYRM9A8MSI8 78 aa11.92□□□□□ -0.5
IRF1-202ENST00000405885 SCGB1D1O95968 90 aa11.92□□□□□ -0.5
IRF1-202ENST00000405885 DEFA6Q01524 100 aa11.92□□□□□ -0.5
IRF1-202ENST00000405885 Q8N976 141 aa11.92□□□□□ -0.5
IRF1-202ENST00000405885 KIR2DL4Q99706 377 aa11.92□□□□□ -0.5
IRF1-202ENST00000405885 TSHBP01222 138 aa11.91□□□□□ -0.5
IRF1-202ENST00000405885 RPL32P62910 135 aaKnown RBP11.91□□□□□ -0.5
IRF1-202ENST00000405885 TP53TG1Q9Y2A0 90 aa11.91□□□□□ -0.5
IRF1-202ENST00000405885 DNAH9Q9NYC9 4486 aa11.91□□□□□ -0.5
IRF1-202ENST00000405885 MEGF8Q7Z7M0 2845 aa11.91□□□□□ -0.5
IRF1-202ENST00000405885 GAGE12JA6NER3 117 aa11.91□□□□□ -0.5
IRF1-202ENST00000405885 GAGE1Q13065 139 aa11.91□□□□□ -0.5
IRF1-202ENST00000405885 GAGE4Q13068 117 aa11.91□□□□□ -0.5
IRF1-202ENST00000405885 GAGE5Q13069 117 aa11.91□□□□□ -0.5
IRF1-202ENST00000405885 GAGE13Q4V321 117 aa11.91□□□□□ -0.5
IRF1-202ENST00000405885 I3L3M4 83 aa11.9□□□□□ -0.5
IRF1-202ENST00000405885 RPL39P62891 51 aaKnown RBP11.9□□□□□ -0.5
IRF1-202ENST00000405885 C14orf144Q96I85 54 aa11.9□□□□□ -0.5
IRF1-202ENST00000405885 PRKDCP78527 4128 aaKnown RBP11.9□□□□□ -0.5
IRF1-202ENST00000405885 TRBV7-3A0A075B6L6 115 aa11.9□□□□□ -0.51
IRF1-202ENST00000405885 DAD1P61803 113 aa11.9□□□□□ -0.51
IRF1-202ENST00000405885 ORMDL2Q53FV1 153 aa11.9□□□□□ -0.51
IRF1-202ENST00000405885 SPART-AS1P0CW21 52 aa11.89□□□□□ -0.51
IRF1-202ENST00000405885 PMCHL2Q9BQD1 86 aa11.89□□□□□ -0.51
IRF1-202ENST00000405885 HSPB8Q9UJY1 196 aa11.89□□□□□ -0.51
IRF1-202ENST00000405885 HHLA3Q9XRX5 114 aa11.89□□□□□ -0.51
IRF1-202ENST00000405885 TSTD3H0UI37 97 aa11.88□□□□□ -0.51
IRF1-202ENST00000405885 SYS1-DBNDD2H3BUS1 97 aa11.88□□□□□ -0.51
IRF1-202ENST00000405885 DDTP30046 118 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms