RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 MED14OSP0DP75 135 aa11.56□□□□□ -0.56
ATG4B-205ENST00000404914 UBE2E1P51965 193 aa11.56□□□□□ -0.56
ATG4B-205ENST00000404914 PAPPA-AS1Q5QFB9 102 aa11.56□□□□□ -0.56
ATG4B-205ENST00000404914 TRAV41A0A0B4J266 112 aa11.56□□□□□ -0.56
ATG4B-205ENST00000404914 TEX49A0A1B0GTD5 131 aa11.56□□□□□ -0.56
ATG4B-205ENST00000404914 IGHV4-39P01824 125 aa11.56□□□□□ -0.56
ATG4B-205ENST00000404914 APRG1Q8IVJ8 170 aa11.56□□□□□ -0.56
ATG4B-205ENST00000404914 Q8N1Y9 231 aa11.56□□□□□ -0.56
ATG4B-205ENST00000404914 TIMM17AQ99595 171 aa11.56□□□□□ -0.56
ATG4B-205ENST00000404914 VCYO14598 125 aa11.55□□□□□ -0.56
ATG4B-205ENST00000404914 C19orf54Q5BKX5 351 aa11.55□□□□□ -0.56
ATG4B-205ENST00000404914 TMEM141Q96I45 108 aa11.55□□□□□ -0.56
ATG4B-205ENST00000404914 TMEM223A0PJW6 202 aa11.54□□□□□ -0.56
ATG4B-205ENST00000404914 P0DMU3 169 aa11.54□□□□□ -0.56
ATG4B-205ENST00000404914 FAM231AP0DMU4 169 aa11.54□□□□□ -0.56
ATG4B-205ENST00000404914 FAM231CP0DMU5 169 aa11.54□□□□□ -0.56
ATG4B-205ENST00000404914 TRAV12-3A0A0B4J271 114 aa11.54□□□□□ -0.56
ATG4B-205ENST00000404914 PPP1R17O96001 155 aa11.54□□□□□ -0.56
ATG4B-205ENST00000404914 PRRC2AP48634 2157 aaKnown RBP11.54□□□□□ -0.56
ATG4B-205ENST00000404914 CSMD2Q7Z408 3487 aa11.54□□□□□ -0.56
ATG4B-205ENST00000404914 Q6ZSV7 163 aa11.53□□□□□ -0.56
ATG4B-205ENST00000404914 CENPEQ02224 2701 aa11.53□□□□□ -0.56
ATG4B-205ENST00000404914 A0A0J9YXV3 536 aa11.53□□□□□ -0.56
ATG4B-205ENST00000404914 CCDC179H3BU77 68 aa11.53□□□□□ -0.56
ATG4B-205ENST00000404914 ZNF22P17026 224 aaPredicted RBP11.53□□□□□ -0.56
ATG4B-205ENST00000404914 RPL32P62910 135 aaKnown RBP11.53□□□□□ -0.56
ATG4B-205ENST00000404914 TRBV27A0A0K0K1C4 114 aa11.53□□□□□ -0.56
ATG4B-205ENST00000404914 RHODO00212 210 aa11.53□□□□□ -0.56
ATG4B-205ENST00000404914 GAGE5Q13069 117 aa11.53□□□□□ -0.56
ATG4B-205ENST00000404914 GAGE6Q13070 117 aa11.53□□□□□ -0.56
ATG4B-205ENST00000404914 MDFICQ9P1T7 246 aa11.53□□□□□ -0.56
ATG4B-205ENST00000404914 GCN1Q92616 2671 aaKnown RBP11.52□□□□□ -0.56
ATG4B-205ENST00000404914 Q1RN00 199 aa11.52□□□□□ -0.57
ATG4B-205ENST00000404914 ODF3Q96PU9 254 aa11.52□□□□□ -0.57
ATG4B-205ENST00000404914 TMEM262E9PQX1 116 aa11.52□□□□□ -0.57
ATG4B-205ENST00000404914 NPFFO15130 113 aa11.52□□□□□ -0.57
ATG4B-205ENST00000404914 LINC01620Q4KN68 170 aa11.52□□□□□ -0.57
ATG4B-205ENST00000404914 FAM159AQ6UWV7 190 aa11.52□□□□□ -0.57
ATG4B-205ENST00000404914 KLLNB2CW77 178 aa11.51□□□□□ -0.57
ATG4B-205ENST00000404914 LEPROTO15243 131 aa11.51□□□□□ -0.57
ATG4B-205ENST00000404914 RHPN1-AS1Q9BWJ2 59 aa11.51□□□□□ -0.57
ATG4B-205ENST00000404914 CELSR2Q9HCU4 2923 aa11.51□□□□□ -0.57
ATG4B-205ENST00000404914 C19orf84I3L1E1 186 aa11.51□□□□□ -0.57
ATG4B-205ENST00000404914 TRIAP1O43715 76 aa11.51□□□□□ -0.57
ATG4B-205ENST00000404914 IGKV3-20P01619 116 aa11.51□□□□□ -0.57
ATG4B-205ENST00000404914 FBXL19-AS1Q494R0 122 aa11.51□□□□□ -0.57
ATG4B-205ENST00000404914 TRAV12-2A0A075B6T6 113 aa11.5□□□□□ -0.57
ATG4B-205ENST00000404914 NDUFV3P56181 108 aaKnown RBP11.5□□□□□ -0.57
ATG4B-205ENST00000404914 BRD3OSQ6XYD6 125 aa11.5□□□□□ -0.57
ATG4B-205ENST00000404914 A0A0B4J2C4 111 aa11.5□□□□□ -0.57
ATG4B-205ENST00000404914 NDUFA4O00483 81 aa11.5□□□□□ -0.57
ATG4B-205ENST00000404914 GAGE2BQ13066 116 aa11.5□□□□□ -0.57
ATG4B-205ENST00000404914 GAGE2EQ4V326 116 aa11.5□□□□□ -0.57
ATG4B-205ENST00000404914 GAGE2DQ9UEU5 116 aa11.5□□□□□ -0.57
ATG4B-205ENST00000404914 FAM223BA6NKX1 122 aa11.5□□□□□ -0.57
ATG4B-205ENST00000404914 M0QY20 66 aa11.5□□□□□ -0.57
ATG4B-205ENST00000404914 LGALS9O00182 355 aa11.5□□□□□ -0.57
ATG4B-205ENST00000404914 ZNF56Q15929 161 aa11.5□□□□□ -0.57
ATG4B-205ENST00000404914 FAM223AQ8IWN6 122 aa11.5□□□□□ -0.57
ATG4B-205ENST00000404914 UBTD1Q9HAC8 227 aa11.5□□□□□ -0.57
ATG4B-205ENST00000404914 USP9YO00507 2555 aaPredicted RBP11.49□□□□□ -0.57
ATG4B-205ENST00000404914 TRAV8-3A0A0A6YYJ7 113 aa11.49□□□□□ -0.57
ATG4B-205ENST00000404914 A0A0J9YXY3 114 aa11.49□□□□□ -0.57
ATG4B-205ENST00000404914 NBPF19A0A087WUL8 3843 aa11.49□□□□□ -0.57
ATG4B-205ENST00000404914 A8MZ25 164 aa11.49□□□□□ -0.57
ATG4B-205ENST00000404914 SNCGO76070 127 aa11.49□□□□□ -0.57
ATG4B-205ENST00000404914 NPC2P61916 151 aa11.49□□□□□ -0.57
ATG4B-205ENST00000404914 RNASE13Q5GAN3 156 aaKnown RBP11.49□□□□□ -0.57
ATG4B-205ENST00000404914 M0R2P5 195 aa11.48□□□□□ -0.57
ATG4B-205ENST00000404914 LY6EQ16553 131 aa11.48□□□□□ -0.57
ATG4B-205ENST00000404914 ADAMTSL4-AS1Q5T5F5 129 aa11.48□□□□□ -0.57
ATG4B-205ENST00000404914 CEMP1Q6PRD7 247 aaPredicted RBP11.48□□□□□ -0.57
ATG4B-205ENST00000404914 LITAFQ99732 161 aa11.48□□□□□ -0.57
ATG4B-205ENST00000404914 SPXQ9BT56 116 aa11.48□□□□□ -0.57
ATG4B-205ENST00000404914 BPESC1Q9GZL8 116 aa11.48□□□□□ -0.57
ATG4B-205ENST00000404914 LMO4P61968 165 aa11.48□□□□□ -0.57
ATG4B-205ENST00000404914 FAM104AQ969W3 186 aa11.48□□□□□ -0.57
ATG4B-205ENST00000404914 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.48□□□□□ -0.575e-8■■■■■ 29.2
ATG4B-205ENST00000404914 TRBV6-5A0A0K0K1A5 114 aa11.47□□□□□ -0.57
ATG4B-205ENST00000404914 DOPEY2Q9Y3R5 2298 aa11.47□□□□□ -0.57
ATG4B-205ENST00000404914 FASNP49327 2511 aaKnown RBP11.47□□□□□ -0.57
ATG4B-205ENST00000404914 IGLV4-3A0A075B6K6 122 aa11.47□□□□□ -0.57
ATG4B-205ENST00000404914 C15orf53Q8NAA6 179 aa11.47□□□□□ -0.57
ATG4B-205ENST00000404914 MOB4Q9Y3A3 225 aa11.47□□□□□ -0.57
ATG4B-205ENST00000404914 IGHV3-16A0A0C4DH30 117 aa11.46□□□□□ -0.57
ATG4B-205ENST00000404914 ATXN8Q156A1 80 aa11.46□□□□□ -0.57
ATG4B-205ENST00000404914 M0QXV9 152 aa11.46□□□□□ -0.57
ATG4B-205ENST00000404914 IGHV1-69P01742 117 aa11.46□□□□□ -0.57
ATG4B-205ENST00000404914 TTC32Q5I0X7 151 aa11.46□□□□□ -0.57
ATG4B-205ENST00000404914 C20orf203Q8NBC4 194 aa11.46□□□□□ -0.57
ATG4B-205ENST00000404914 IGHV3-30-3P0DP02 117 aa11.46□□□□□ -0.58
ATG4B-205ENST00000404914 NSUN5P1Q3KNT7 163 aa11.46□□□□□ -0.58
ATG4B-205ENST00000404914 PRSS2P07478 247 aa11.45□□□□□ -0.58
ATG4B-205ENST00000404914 PF4V1P10720 104 aa11.45□□□□□ -0.58
ATG4B-205ENST00000404914 CLEC2BQ92478 149 aa11.45□□□□□ -0.58
ATG4B-205ENST00000404914 TRAV8-4A0A0B4J246 113 aa11.45□□□□□ -0.58
ATG4B-205ENST00000404914 C9orf85Q96MD7 179 aa11.45□□□□□ -0.58
ATG4B-205ENST00000404914 FBN2P35556 2912 aa11.45□□□□□ -0.58
ATG4B-205ENST00000404914 TRBV10-2A0A0K0K1G8 114 aa11.44□□□□□ -0.58
ATG4B-205ENST00000404914 PLA2G2AP14555 144 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms