RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 VCYO14598 125 aa7.15□□□□□ -1.26
SMC1B-202ENST00000404354 PROK1P58294 105 aa7.15□□□□□ -1.26
SMC1B-202ENST00000404354 LYRM7Q5U5X0 104 aa7.15□□□□□ -1.26
SMC1B-202ENST00000404354 Q8N1Y9 231 aa7.15□□□□□ -1.26
SMC1B-202ENST00000404354 MINOS1-NBL1R4GNA1 71 aa7.15□□□□□ -1.26
SMC1B-202ENST00000404354 C5orf56Q8N8D9 126 aa7.15□□□□□ -1.27
SMC1B-202ENST00000404354 ATP6V0E2Q8NHE4 81 aa7.15□□□□□ -1.27
SMC1B-202ENST00000404354 Q9UF83 564 aa7.15□□□□□ -1.27
SMC1B-202ENST00000404354 NPFFO15130 113 aa7.14□□□□□ -1.27
SMC1B-202ENST00000404354 IGHV3-33P01772 117 aa7.14□□□□□ -1.27
SMC1B-202ENST00000404354 SPINK13Q1W4C9 94 aa7.14□□□□□ -1.27
SMC1B-202ENST00000404354 CLEC2BQ92478 149 aa7.14□□□□□ -1.27
SMC1B-202ENST00000404354 ABCA2Q9BZC7 2435 aa7.14□□□□□ -1.27
SMC1B-202ENST00000404354 ZNF876PQ49A33 203 aa7.14□□□□□ -1.27
SMC1B-202ENST00000404354 OVOL1O14753 267 aa7.14□□□□□ -1.27
SMC1B-202ENST00000404354 UBE2E1P51965 193 aa7.14□□□□□ -1.27
SMC1B-202ENST00000404354 POLR2KP53803 58 aaKnown RBP7.14□□□□□ -1.27
SMC1B-202ENST00000404354 ZNF625Q96I27 306 aaPredicted RBP7.14□□□□□ -1.27
SMC1B-202ENST00000404354 DUX3Q96PT4 197 aa7.14□□□□□ -1.27
SMC1B-202ENST00000404354 U3KQE9 123 aa7.14□□□□□ -1.27
SMC1B-202ENST00000404354 JMJD1CQ15652 2540 aa7.14□□□□□ -1.27
SMC1B-202ENST00000404354 C10orf99Q6UWK7 81 aa7.13□□□□□ -1.27
SMC1B-202ENST00000404354 ITPR1Q14643 2758 aa7.13□□□□□ -1.27
SMC1B-202ENST00000404354 LINC01619G3V211 115 aa7.13□□□□□ -1.27
SMC1B-202ENST00000404354 AMELXQ99217 191 aa7.13□□□□□ -1.27
SMC1B-202ENST00000404354 VCX2Q9H322 139 aa7.13□□□□□ -1.27
SMC1B-202ENST00000404354 KIF25-AS1Q9Y6Z4 181 aa7.13□□□□□ -1.27
SMC1B-202ENST00000404354 UTP20O75691 2785 aaKnown RBP7.13□□□□□ -1.27
SMC1B-202ENST00000404354 NHLRC4P0CG21 123 aaPredicted RBP7.13□□□□□ -1.27
SMC1B-202ENST00000404354 ADORA2A-AS1P86434 159 aa7.13□□□□□ -1.27
SMC1B-202ENST00000404354 FAM208BQ5VWN6 2430 aa7.12□□□□□ -1.27
SMC1B-202ENST00000404354 HIST2H2BDQ6DRA6 164 aa7.12□□□□□ -1.27
SMC1B-202ENST00000404354 C15orf53Q8NAA6 179 aa7.12□□□□□ -1.27
SMC1B-202ENST00000404354 CACNA1AO00555 2505 aa7.12□□□□□ -1.27
SMC1B-202ENST00000404354 TRIAP1O43715 76 aa7.12□□□□□ -1.27
SMC1B-202ENST00000404354 GAGE5Q13069 117 aa7.12□□□□□ -1.27
SMC1B-202ENST00000404354 GAGE6Q13070 117 aa7.12□□□□□ -1.27
SMC1B-202ENST00000404354 LINC01620Q4KN68 170 aa7.12□□□□□ -1.27
SMC1B-202ENST00000404354 MRPL53Q96EL3 112 aaKnown RBP7.12□□□□□ -1.27
SMC1B-202ENST00000404354 IGHV3-38A0A0C4DH36 116 aa7.12□□□□□ -1.27
SMC1B-202ENST00000404354 OOSP1A8MZH6 123 aa7.12□□□□□ -1.27
SMC1B-202ENST00000404354 TMEM263Q8WUH6 116 aaKnown RBP7.12□□□□□ -1.27
SMC1B-202ENST00000404354 H3BUX3 64 aa7.11□□□□□ -1.27
SMC1B-202ENST00000404354 ZNF22P17026 224 aaPredicted RBP7.11□□□□□ -1.27
SMC1B-202ENST00000404354 ADAMTSL4-AS1Q5T5F5 129 aa7.11□□□□□ -1.27
SMC1B-202ENST00000404354 C2orf82Q6UX34 121 aa7.11□□□□□ -1.27
SMC1B-202ENST00000404354 SMIM20Q8N5G0 67 aa7.11□□□□□ -1.27
SMC1B-202ENST00000404354 SOCS3O14543 225 aa7.11□□□□□ -1.27
SMC1B-202ENST00000404354 PAPPA-AS1Q5QFB9 102 aa7.11□□□□□ -1.27
SMC1B-202ENST00000404354 TRAV8-4A0A0B4J246 113 aa7.1□□□□□ -1.27
SMC1B-202ENST00000404354 IGHV4-38-2P0DP08 117 aa7.1□□□□□ -1.27
SMC1B-202ENST00000404354 NDUFV3P56181 108 aaKnown RBP7.1□□□□□ -1.27
SMC1B-202ENST00000404354 RHODO00212 210 aa7.1□□□□□ -1.27
SMC1B-202ENST00000404354 CD28P10747 220 aa7.1□□□□□ -1.27
SMC1B-202ENST00000404354 C11orf71Q6IPW1 123 aa7.1□□□□□ -1.27
SMC1B-202ENST00000404354 ACACBO00763 2458 aa7.1□□□□□ -1.27
SMC1B-202ENST00000404354 A0A0J9YXY3 114 aa7.1□□□□□ -1.27
SMC1B-202ENST00000404354 TMEM262E9PQX1 116 aa7.1□□□□□ -1.27
SMC1B-202ENST00000404354 IGHV3-30-3P0DP02 117 aa7.1□□□□□ -1.27
SMC1B-202ENST00000404354 TMEM223A0PJW6 202 aa7.09□□□□□ -1.27
SMC1B-202ENST00000404354 PPP1R17O96001 155 aa7.09□□□□□ -1.27
SMC1B-202ENST00000404354 MOB4Q9Y3A3 225 aa7.09□□□□□ -1.27
SMC1B-202ENST00000404354 M0QY20 66 aa7.09□□□□□ -1.27
SMC1B-202ENST00000404354 TMEM141Q96I45 108 aa7.09□□□□□ -1.27
SMC1B-202ENST00000404354 LENEPQ9Y5L5 61 aa7.09□□□□□ -1.27
SMC1B-202ENST00000404354 IGHV1-69DA0A0B4J2H0 117 aa7.09□□□□□ -1.27
SMC1B-202ENST00000404354 IGHV3-16A0A0C4DH30 117 aa7.09□□□□□ -1.27
SMC1B-202ENST00000404354 LMO4P61968 165 aa7.09□□□□□ -1.27
SMC1B-202ENST00000404354 ATXN8Q156A1 80 aa7.09□□□□□ -1.27
SMC1B-202ENST00000404354 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.08□□□□□ -1.28
SMC1B-202ENST00000404354 IGKV2-29A2NJV5 120 aaPredicted RBP7.08□□□□□ -1.28
SMC1B-202ENST00000404354 NDUFA4O00483 81 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 TIMM17AQ99595 171 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 CHCHD5Q9BSY4 110 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 TIMM21Q9BVV7 248 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 IGHV4OR15-8A0A075B7B6 117 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 A0A087WW49 117 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 IFITM1P13164 125 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 CITED1Q99966 193 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 FLNCQ14315 2725 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 IGLV4-3A0A075B6K6 122 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 GAGE12JA6NER3 117 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 LEPROTO15243 131 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 GAGE7O76087 117 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 GAGE12FP0CL80 117 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 GAGE12GP0CL81 117 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 GAGE12IP0CL82 117 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 GAGE4Q13068 117 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 SBSPONQ8IVN8 264 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 SVIPQ8NHG7 77 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 ODF3Q96PU9 254 aa7.08□□□□□ -1.28
SMC1B-202ENST00000404354 TRBV27A0A0K0K1C4 114 aa7.07□□□□□ -1.28
SMC1B-202ENST00000404354 H3BMM0 161 aa7.07□□□□□ -1.28
SMC1B-202ENST00000404354 C20orf203Q8NBC4 194 aa7.07□□□□□ -1.28
SMC1B-202ENST00000404354 UBE2WQ96B02 151 aa7.07□□□□□ -1.28
SMC1B-202ENST00000404354 DAZ1Q9NQZ3 744 aaKnown RBP7.07□□□□□ -1.28
SMC1B-202ENST00000404354 NDUFA12Q9UI09 145 aa7.07□□□□□ -1.28
SMC1B-202ENST00000404354 FBN2P35556 2912 aa7.07□□□□□ -1.28
SMC1B-202ENST00000404354 MYO18BQ8IUG5 2567 aa7.07□□□□□ -1.28
SMC1B-202ENST00000404354 FAM223BA6NKX1 122 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms