RNA–Protein interactions for RNA: ENST00000404249.7

CDK11A-208, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK11A, Length 2,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-208ENST00000404249 SLC25A29Q8N8R3 303 aa13.09□□□□□ -0.31
CDK11A-208ENST00000404249 DLX4Q92988 240 aaPredicted RBP13.09□□□□□ -0.31
CDK11A-208ENST00000404249 DOPEY2Q9Y3R5 2298 aa13.08□□□□□ -0.32
CDK11A-208ENST00000404249 Q6YL49 198 aa13.08□□□□□ -0.32
CDK11A-208ENST00000404249 NDUFA11Q86Y39 141 aa13.08□□□□□ -0.32
CDK11A-208ENST00000404249 KNCNA6PVL3 124 aa13.08□□□□□ -0.32
CDK11A-208ENST00000404249 FLNCQ14315 2725 aa13.08□□□□□ -0.32
CDK11A-208ENST00000404249 CRYBG3Q68DQ2 2970 aa13.07□□□□□ -0.32
CDK11A-208ENST00000404249 TMEM223A0PJW6 202 aa13.07□□□□□ -0.32
CDK11A-208ENST00000404249 FSHBP01225 129 aa13.07□□□□□ -0.32
CDK11A-208ENST00000404249 LOC107984156A0A0G2JMH3 177 aa13.07□□□□□ -0.32
CDK11A-208ENST00000404249 LEPROTO15243 131 aa13.07□□□□□ -0.32
CDK11A-208ENST00000404249 SFTA2Q6UW10 78 aa13.07□□□□□ -0.32
CDK11A-208ENST00000404249 ARL17AQ8IVW1 177 aa13.07□□□□□ -0.32
CDK11A-208ENST00000404249 SPAG8Q99932 426 aaPredicted RBP13.07□□□□□ -0.32
CDK11A-208ENST00000404249 TSSC4Q9Y5U2 329 aaPredicted RBP13.07□□□□□ -0.32
CDK11A-208ENST00000404249 IGLV4-3A0A075B6K6 122 aa13.06□□□□□ -0.32
CDK11A-208ENST00000404249 UBE2D3P61077 147 aa13.06□□□□□ -0.32
CDK11A-208ENST00000404249 UBE2D2P62837 147 aa13.06□□□□□ -0.32
CDK11A-208ENST00000404249 ZNF22P17026 224 aaPredicted RBP13.05□□□□□ -0.32
CDK11A-208ENST00000404249 SLURP1P55000 103 aa13.05□□□□□ -0.32
CDK11A-208ENST00000404249 SORL1Q92673 2214 aa13.05□□□□□ -0.32
CDK11A-208ENST00000404249 CFC1BP0CG36 223 aa13.05□□□□□ -0.32
CDK11A-208ENST00000404249 CFC1P0CG37 223 aa13.05□□□□□ -0.32
CDK11A-208ENST00000404249 HTN1P15515 57 aa13.05□□□□□ -0.32
CDK11A-208ENST00000404249 DEFB131AP59861 70 aa13.05□□□□□ -0.32
CDK11A-208ENST00000404249 DEFB136Q30KP8 78 aa13.05□□□□□ -0.32
CDK11A-208ENST00000404249 CFAP126Q5VTH2 177 aa13.05□□□□□ -0.32
CDK11A-208ENST00000404249 EDA2RQ9HAV5 297 aa13.05□□□□□ -0.32
CDK11A-208ENST00000404249 BEX4Q9NWD9 120 aaPredicted RBP13.05□□□□□ -0.32
CDK11A-208ENST00000404249 RHODO00212 210 aa13.04□□□□□ -0.32
CDK11A-208ENST00000404249 PSMB2P49721 201 aa13.04□□□□□ -0.32
CDK11A-208ENST00000404249 LYRM7Q5U5X0 104 aa13.04□□□□□ -0.32
CDK11A-208ENST00000404249 IGHV3-73A0A0B4J1V6 119 aa13.04□□□□□ -0.32
CDK11A-208ENST00000404249 C18orf65Q6ZTR6 163 aa13.04□□□□□ -0.32
CDK11A-208ENST00000404249 A0A0J9YXV3 536 aa13.03□□□□□ -0.32
CDK11A-208ENST00000404249 VCX2Q9H322 139 aa13.03□□□□□ -0.32
CDK11A-208ENST00000404249 ANKRD17O75179 2603 aaKnown RBP13.03□□□□□ -0.32
CDK11A-208ENST00000404249 A8MTW9 85 aa13.03□□□□□ -0.32
CDK11A-208ENST00000404249 TMEM238C9JI98 176 aa13.03□□□□□ -0.32
CDK11A-208ENST00000404249 IGSF10Q6WRI0 2623 aa13.03□□□□□ -0.32
CDK11A-208ENST00000404249 PIEZO1Q92508 2521 aa13.02□□□□□ -0.32
CDK11A-208ENST00000404249 IGHV3-64A0A075B6Q5 118 aa13.02□□□□□ -0.32
CDK11A-208ENST00000404249 RBMY1BA6NDE4 496 aaKnown RBP13.02□□□□□ -0.32
CDK11A-208ENST00000404249 GAGE12HA6NDE8 117 aa13.02□□□□□ -0.32
CDK11A-208ENST00000404249 RBMY1EA6NEQ0 496 aaKnown RBP13.02□□□□□ -0.32
CDK11A-208ENST00000404249 RBMY1DP0C7P1 496 aaKnown RBP13.02□□□□□ -0.32
CDK11A-208ENST00000404249 IGHV4-31P0DP07 118 aa13.02□□□□□ -0.32
CDK11A-208ENST00000404249 SMCPP49901 116 aaPredicted RBP13.02□□□□□ -0.32
CDK11A-208ENST00000404249 CR1P17927 2039 aa13.02□□□□□ -0.32
CDK11A-208ENST00000404249 H3BMM0 161 aa13.02□□□□□ -0.33
CDK11A-208ENST00000404249 INSL3P51460 131 aa13.02□□□□□ -0.33
CDK11A-208ENST00000404249 PROK1P58294 105 aa13.02□□□□□ -0.33
CDK11A-208ENST00000404249 C10orf126Q8N4M7 172 aa13.02□□□□□ -0.33
CDK11A-208ENST00000404249 Q5PR19 223 aa13.01□□□□□ -0.33
CDK11A-208ENST00000404249 DUX3Q96PT4 197 aa13.01□□□□□ -0.33
CDK11A-208ENST00000404249 GTSF1LQ9H1H1 148 aa13.01□□□□□ -0.33
CDK11A-208ENST00000404249 UTP20O75691 2785 aaKnown RBP13.01□□□□□ -0.33
CDK11A-208ENST00000404249 CD28P10747 220 aa13.01□□□□□ -0.33
CDK11A-208ENST00000404249 SIGMAR1Q99720 223 aa13.01□□□□□ -0.33
CDK11A-208ENST00000404249 SPATA25Q9BR10 227 aa13.01□□□□□ -0.33
CDK11A-208ENST00000404249 C1QTNF4Q9BXJ3 329 aa13.01□□□□□ -0.33
CDK11A-208ENST00000404249 NACAE9PAV3 2078 aa13□□□□□ -0.33
CDK11A-208ENST00000404249 PYGO1Q9Y3Y4 419 aa13□□□□□ -0.33
CDK11A-208ENST00000404249 AZU1P20160 251 aa13□□□□□ -0.33
CDK11A-208ENST00000404249 ATP6V0E2Q8NHE4 81 aa13□□□□□ -0.33
CDK11A-208ENST00000404249 PRO1854Q9UHT4 67 aa13□□□□□ -0.33
CDK11A-208ENST00000404249 CACNA1AO00555 2505 aa13□□□□□ -0.33
CDK11A-208ENST00000404249 CSMD2Q7Z408 3487 aa12.99□□□□□ -0.33
CDK11A-208ENST00000404249 A8MWV9 139 aa12.99□□□□□ -0.33
CDK11A-208ENST00000404249 M0R2P5 195 aa12.99□□□□□ -0.33
CDK11A-208ENST00000404249 PRM2P04554 102 aa12.99□□□□□ -0.33
CDK11A-208ENST00000404249 TNFRSF18Q9Y5U5 241 aa12.99□□□□□ -0.33
CDK11A-208ENST00000404249 TRAV2A0A0B4J234 112 aa12.99□□□□□ -0.33
CDK11A-208ENST00000404249 TCL1BO95988 128 aa12.99□□□□□ -0.33
CDK11A-208ENST00000404249 ZNF415Q09FC8 603 aa12.99□□□□□ -0.33
CDK11A-208ENST00000404249 TMEM61Q8N0U2 210 aa12.99□□□□□ -0.33
CDK11A-208ENST00000404249 ZNF418Q8TF45 676 aaPredicted RBP12.99□□□□□ -0.33
CDK11A-208ENST00000404249 FAM104AQ969W3 186 aa12.99□□□□□ -0.33
CDK11A-208ENST00000404249 A4D1N5 150 aa12.98□□□□□ -0.33
CDK11A-208ENST00000404249 PEMTQ9UBM1 199 aa12.98□□□□□ -0.33
CDK11A-208ENST00000404249 TRBV20-1A0A075B6N2 111 aa12.97□□□□□ -0.33
CDK11A-208ENST00000404249 FOXI1Q12951 378 aa12.97□□□□□ -0.33
CDK11A-208ENST00000404249 USP9YO00507 2555 aaPredicted RBP12.97□□□□□ -0.33
CDK11A-208ENST00000404249 ZANQ9Y493 2812 aa12.97□□□□□ -0.33
CDK11A-208ENST00000404249 CEMP1Q6PRD7 247 aaPredicted RBP12.97□□□□□ -0.33
CDK11A-208ENST00000404249 Q8N2B8 174 aa12.97□□□□□ -0.33
CDK11A-208ENST00000404249 EIF4EBP3O60516 100 aaPredicted RBP12.96□□□□□ -0.33
CDK11A-208ENST00000404249 CRYBA4P53673 196 aa12.96□□□□□ -0.33
CDK11A-208ENST00000404249 MRPS36P82909 103 aaKnown RBP12.96□□□□□ -0.33
CDK11A-208ENST00000404249 PIK3CD-AS1Q5SR53 167 aa12.96□□□□□ -0.33
CDK11A-208ENST00000404249 TIMM21Q9BVV7 248 aa12.96□□□□□ -0.33
CDK11A-208ENST00000404249 MAP6D1Q9H9H5 199 aa12.96□□□□□ -0.33
CDK11A-208ENST00000404249 IGHV3-30-3P0DP02 117 aa12.96□□□□□ -0.34
CDK11A-208ENST00000404249 SMAGPQ0VAQ4 97 aa12.96□□□□□ -0.34
CDK11A-208ENST00000404249 SPXQ9BT56 116 aa12.96□□□□□ -0.34
CDK11A-208ENST00000404249 FBN2P35556 2912 aa12.95□□□□□ -0.34
CDK11A-208ENST00000404249 SCGB1A1P11684 91 aa12.95□□□□□ -0.34
CDK11A-208ENST00000404249 Q6ZSN1 163 aa12.95□□□□□ -0.34
CDK11A-208ENST00000404249 MUSTN1Q8IVN3 82 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms