RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 TM2D2Q9BX73 214 aa9.46□□□□□ -0.9
PPP4R1-202ENST00000400555 MXRA5Q9NR99 2828 aa9.46□□□□□ -0.9
PPP4R1-202ENST00000400555 IGHV1OR15-1A0A075B7D0 117 aa9.46□□□□□ -0.9
PPP4R1-202ENST00000400555 HOXD3P31249 432 aaPredicted RBP9.46□□□□□ -0.9
PPP4R1-202ENST00000400555 UBE2E2Q96LR5 201 aa9.46□□□□□ -0.9
PPP4R1-202ENST00000400555 SOCS3O14543 225 aa9.45□□□□□ -0.9
PPP4R1-202ENST00000400555 SAMD13Q5VXD3 122 aa9.45□□□□□ -0.9
PPP4R1-202ENST00000400555 APRG1Q8IVJ8 170 aa9.45□□□□□ -0.9
PPP4R1-202ENST00000400555 LINC01587Q99440 93 aa9.45□□□□□ -0.9
PPP4R1-202ENST00000400555 DGAT2L7PQ6IED9 249 aa9.45□□□□□ -0.9
PPP4R1-202ENST00000400555 IGHV3-53P01767 116 aa9.45□□□□□ -0.9
PPP4R1-202ENST00000400555 CD28P10747 220 aa9.45□□□□□ -0.9
PPP4R1-202ENST00000400555 TNFRSF18Q9Y5U5 241 aa9.45□□□□□ -0.9
PPP4R1-202ENST00000400555 IGHV4-4A0A075B6R2 117 aa9.44□□□□□ -0.9
PPP4R1-202ENST00000400555 E9PLD3 99 aa9.44□□□□□ -0.9
PPP4R1-202ENST00000400555 AZU1P20160 251 aa9.44□□□□□ -0.9
PPP4R1-202ENST00000400555 DCANP1Q8TF63 244 aa9.43□□□□□ -0.9
PPP4R1-202ENST00000400555 ZNF580Q9UK33 172 aa9.43□□□□□ -0.9
PPP4R1-202ENST00000400555 TRAV12-1A0A0B4J245 112 aa9.43□□□□□ -0.9
PPP4R1-202ENST00000400555 J3QQQ9 107 aa9.43□□□□□ -0.9
PPP4R1-202ENST00000400555 ZNF625Q96I27 306 aaPredicted RBP9.43□□□□□ -0.9
PPP4R1-202ENST00000400555 FLNAP21333 2647 aaKnown RBP9.43□□□□□ -0.9
PPP4R1-202ENST00000400555 IGKV3OR2-268A0A0C4DH90 116 aa9.43□□□□□ -0.9
PPP4R1-202ENST00000400555 XCL2Q9UBD3 114 aa9.43□□□□□ -0.9
PPP4R1-202ENST00000400555 SIGMAR1Q99720 223 aa9.42□□□□□ -0.9
PPP4R1-202ENST00000400555 A0A0J9YX75 114 aa9.42□□□□□ -0.9
PPP4R1-202ENST00000400555 A8MZ25 164 aa9.42□□□□□ -0.9
PPP4R1-202ENST00000400555 TSHBP01222 138 aa9.42□□□□□ -0.9
PPP4R1-202ENST00000400555 ZNRF2Q8NHG8 242 aa9.42□□□□□ -0.9
PPP4R1-202ENST00000400555 SPAG8Q99932 426 aaPredicted RBP9.42□□□□□ -0.9
PPP4R1-202ENST00000400555 Q9UF83 564 aa9.42□□□□□ -0.9
PPP4R1-202ENST00000400555 TRBV7-3A0A075B6L6 115 aa9.41□□□□□ -0.9
PPP4R1-202ENST00000400555 TRAV8-3A0A0A6YYJ7 113 aa9.41□□□□□ -0.9
PPP4R1-202ENST00000400555 COX6B1P14854 86 aa9.41□□□□□ -0.9
PPP4R1-202ENST00000400555 TSPEAR-AS2P59090 65 aa9.41□□□□□ -0.9
PPP4R1-202ENST00000400555 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.41□□□□□ -0.9
PPP4R1-202ENST00000400555 IGKV2-29A2NJV5 120 aaPredicted RBP9.41□□□□□ -0.9
PPP4R1-202ENST00000400555 GAGE12HA6NDE8 117 aa9.41□□□□□ -0.9
PPP4R1-202ENST00000400555 CRYGDP07320 174 aa9.41□□□□□ -0.9
PPP4R1-202ENST00000400555 LINC01356Q8N9X3 169 aa9.41□□□□□ -0.9
PPP4R1-202ENST00000400555 PRORYQ9H606 182 aa9.41□□□□□ -0.9
PPP4R1-202ENST00000400555 TMEM238C9JI98 176 aa9.41□□□□□ -0.9
PPP4R1-202ENST00000400555 NDUFS8O00217 210 aa9.41□□□□□ -0.9
PPP4R1-202ENST00000400555 DLX4Q92988 240 aaPredicted RBP9.41□□□□□ -0.9
PPP4R1-202ENST00000400555 IGLV1-40P01703 118 aa9.4□□□□□ -0.9
PPP4R1-202ENST00000400555 KLLNB2CW77 178 aa9.4□□□□□ -0.91
PPP4R1-202ENST00000400555 F8W1H4 67 aa9.4□□□□□ -0.91
PPP4R1-202ENST00000400555 TAL2Q16559 108 aa9.39□□□□□ -0.91
PPP4R1-202ENST00000400555 A4D1N5 150 aa9.39□□□□□ -0.91
PPP4R1-202ENST00000400555 POLR2KP53803 58 aaKnown RBP9.39□□□□□ -0.91
PPP4R1-202ENST00000400555 C19orf54Q5BKX5 351 aa9.39□□□□□ -0.91
PPP4R1-202ENST00000400555 DAND5Q8N907 189 aa9.39□□□□□ -0.91
PPP4R1-202ENST00000400555 H3BUA1 57 aa9.39□□□□□ -0.91
PPP4R1-202ENST00000400555 TSPAN13O95857 204 aa9.39□□□□□ -0.91
PPP4R1-202ENST00000400555 PSMB8P28062 276 aa9.39□□□□□ -0.91
PPP4R1-202ENST00000400555 LINC00315P59091 139 aa9.39□□□□□ -0.91
PPP4R1-202ENST00000400555 TRPT1Q86TN4 253 aaKnown RBP9.39□□□□□ -0.91
PPP4R1-202ENST00000400555 GEMIN7Q9H840 131 aaKnown RBP9.39□□□□□ -0.91
PPP4R1-202ENST00000400555 SPANXB1Q9NS25 103 aaPredicted RBP9.39□□□□□ -0.91
PPP4R1-202ENST00000400555 PAPPA-AS1Q5QFB9 102 aa9.38□□□□□ -0.91
PPP4R1-202ENST00000400555 MORN3Q6PF18 240 aaPredicted RBP9.38□□□□□ -0.91
PPP4R1-202ENST00000400555 I3L3M4 83 aa9.38□□□□□ -0.91
PPP4R1-202ENST00000400555 M0QY20 66 aa9.38□□□□□ -0.91
PPP4R1-202ENST00000400555 IGLV4-69A0A075B6H9 119 aa9.38□□□□□ -0.91
PPP4R1-202ENST00000400555 A0A0J9YY99 117 aa9.38□□□□□ -0.91
PPP4R1-202ENST00000400555 LINC01546A6NGU7 62 aa9.38□□□□□ -0.91
PPP4R1-202ENST00000400555 C9JAW5 83 aa9.38□□□□□ -0.91
PPP4R1-202ENST00000400555 SPINK8P0C7L1 97 aa9.38□□□□□ -0.91
PPP4R1-202ENST00000400555 ITPR3Q14573 2671 aa9.38□□□□□ -0.91
PPP4R1-202ENST00000400555 IGIPA6NJ69 53 aa9.37□□□□□ -0.91
PPP4R1-202ENST00000400555 CFHR3Q02985 330 aa9.37□□□□□ -0.91
PPP4R1-202ENST00000400555 TMEM61Q8N0U2 210 aa9.37□□□□□ -0.91
PPP4R1-202ENST00000400555 KIF25-AS1Q9Y6Z4 181 aa9.37□□□□□ -0.91
PPP4R1-202ENST00000400555 K7EQG2 157 aa9.37□□□□□ -0.91
PPP4R1-202ENST00000400555 KRTAP10-9P60411 292 aa9.37□□□□□ -0.91
PPP4R1-202ENST00000400555 NBEAL2Q6ZNJ1 2754 aa9.37□□□□□ -0.91
PPP4R1-202ENST00000400555 TMEM141Q96I45 108 aa9.37□□□□□ -0.91
PPP4R1-202ENST00000400555 USP24Q9UPU5 2620 aa9.37□□□□□ -0.91
PPP4R1-202ENST00000400555 CIDEAO60543 219 aa9.36□□□□□ -0.91
PPP4R1-202ENST00000400555 MUSTN1Q8IVN3 82 aa9.36□□□□□ -0.91
PPP4R1-202ENST00000400555 NIPBLQ6KC79 2804 aaeCLIP9.36□□□□□ -0.91
PPP4R1-202ENST00000400555 TRGV11A0A075B6L2 103 aa9.36□□□□□ -0.91
PPP4R1-202ENST00000400555 K7EMT4 169 aa9.36□□□□□ -0.91
PPP4R1-202ENST00000400555 VPREB3Q9UKI3 123 aa9.36□□□□□ -0.91
PPP4R1-202ENST00000400555 ERG28Q9UKR5 140 aa9.36□□□□□ -0.91
PPP4R1-202ENST00000400555 TRGV1A0A0A0MS02 117 aa9.35□□□□□ -0.91
PPP4R1-202ENST00000400555 TIMM21Q9BVV7 248 aa9.35□□□□□ -0.91
PPP4R1-202ENST00000400555 PRSS47A8MTI9 375 aa9.35□□□□□ -0.91
PPP4R1-202ENST00000400555 NDUFA11Q86Y39 141 aa9.35□□□□□ -0.91
PPP4R1-202ENST00000400555 PRO1854Q9UHT4 67 aa9.35□□□□□ -0.91
PPP4R1-202ENST00000400555 TCL1BO95988 128 aa9.35□□□□□ -0.91
PPP4R1-202ENST00000400555 Q5PR19 223 aa9.35□□□□□ -0.91
PPP4R1-202ENST00000400555 TRAV13-1A0A0B4J241 112 aa9.34□□□□□ -0.91
PPP4R1-202ENST00000400555 HIST2H2BCQ6DN03 193 aa9.34□□□□□ -0.91
PPP4R1-202ENST00000400555 C20orf203Q8NBC4 194 aa9.34□□□□□ -0.91
PPP4R1-202ENST00000400555 CFC1BP0CG36 223 aa9.34□□□□□ -0.91
PPP4R1-202ENST00000400555 CFC1P0CG37 223 aa9.34□□□□□ -0.91
PPP4R1-202ENST00000400555 LYRM7Q5U5X0 104 aa9.34□□□□□ -0.91
PPP4R1-202ENST00000400555 ATP6V0BQ99437 205 aa9.34□□□□□ -0.91
PPP4R1-202ENST00000400555 A8MWV9 139 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms