RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 DEFB114Q30KQ6 69 aa10.48□□□□□ -0.73
CACNA1C-211ENST00000399617 ZNF664Q8N3J9 261 aa10.48□□□□□ -0.73
CACNA1C-211ENST00000399617 WFDC9Q8NEX5 89 aa10.48□□□□□ -0.73
CACNA1C-211ENST00000399617 KRTAP27-1Q3LI81 207 aa10.48□□□□□ -0.73
CACNA1C-211ENST00000399617 EML6Q6ZMW3 1958 aa10.48□□□□□ -0.73
CACNA1C-211ENST00000399617 ANKRD29Q8N6D5 301 aa10.47□□□□□ -0.73
CACNA1C-211ENST00000399617 NOTCH3Q9UM47 2321 aa10.47□□□□□ -0.73
CACNA1C-211ENST00000399617 FAM19A1Q7Z5A9 133 aa10.47□□□□□ -0.73
CACNA1C-211ENST00000399617 CRYBA4P53673 196 aa10.47□□□□□ -0.73
CACNA1C-211ENST00000399617 TMEM131Q92545 1883 aa10.47□□□□□ -0.73
CACNA1C-211ENST00000399617 B9D2Q9BPU9 175 aa10.46□□□□□ -0.73
CACNA1C-211ENST00000399617 POLR3KQ9Y2Y1 108 aaPredicted RBP10.46□□□□□ -0.73
CACNA1C-211ENST00000399617 C9orf118A6NHY6 69 aa10.46□□□□□ -0.74
CACNA1C-211ENST00000399617 GDF5OSQ5U4N7 250 aa10.46□□□□□ -0.74
CACNA1C-211ENST00000399617 PPDPFQ9H3Y8 114 aa10.46□□□□□ -0.74
CACNA1C-211ENST00000399617 A0A0J9YX75 114 aa10.46□□□□□ -0.74
CACNA1C-211ENST00000399617 K7EMT4 169 aa10.46□□□□□ -0.74
CACNA1C-211ENST00000399617 BRI3O95415 125 aa10.45□□□□□ -0.74
CACNA1C-211ENST00000399617 PROK1P58294 105 aa10.45□□□□□ -0.74
CACNA1C-211ENST00000399617 C20orf173Q96LM9 149 aa10.45□□□□□ -0.74
CACNA1C-211ENST00000399617 F8W1H4 67 aa10.45□□□□□ -0.74
CACNA1C-211ENST00000399617 CEND1Q8N111 149 aa10.45□□□□□ -0.74
CACNA1C-211ENST00000399617 PKIGQ9Y2B9 76 aa10.45□□□□□ -0.74
CACNA1C-211ENST00000399617 PYY3Q5JQD4 70 aa10.45□□□□□ -0.74
CACNA1C-211ENST00000399617 REG3AQ06141 175 aa10.45□□□□□ -0.74
CACNA1C-211ENST00000399617 BAALC-AS2P0C853 105 aa10.44□□□□□ -0.74
CACNA1C-211ENST00000399617 UBE2D1P51668 147 aa10.44□□□□□ -0.74
CACNA1C-211ENST00000399617 LINC00173Q6ZV60 143 aa10.44□□□□□ -0.74
CACNA1C-211ENST00000399617 ORMDL1Q9P0S3 153 aa10.44□□□□□ -0.74
CACNA1C-211ENST00000399617 IGKV1D-37A0A075B6S9 117 aa10.44□□□□□ -0.74
CACNA1C-211ENST00000399617 RNF152Q8N8N0 203 aa10.44□□□□□ -0.74
CACNA1C-211ENST00000399617 PRO1854Q9UHT4 67 aa10.44□□□□□ -0.74
CACNA1C-211ENST00000399617 B5MCH6 92 aa10.44□□□□□ -0.74
CACNA1C-211ENST00000399617 PCP2Q8IVA1 136 aa10.44□□□□□ -0.74
CACNA1C-211ENST00000399617 BBC3Q96PG8 261 aaPredicted RBP10.44□□□□□ -0.74
CACNA1C-211ENST00000399617 C1orf229Q6ZS94 237 aaPredicted RBP10.44□□□□□ -0.74
CACNA1C-211ENST00000399617 C9orf85Q96MD7 179 aa10.44□□□□□ -0.74
CACNA1C-211ENST00000399617 ZNF106Q9H2Y7 1883 aaKnown RBP10.44□□□□□ -0.74
CACNA1C-211ENST00000399617 MUSTN1Q8IVN3 82 aa10.43□□□□□ -0.74
CACNA1C-211ENST00000399617 ETDBQ3ZM63 59 aa10.43□□□□□ -0.74
CACNA1C-211ENST00000399617 ZNF702PQ9H963 129 aa10.43□□□□□ -0.74
CACNA1C-211ENST00000399617 SPANXCQ9NY87 97 aa10.43□□□□□ -0.74
CACNA1C-211ENST00000399617 BDP1A6H8Y1 2624 aa10.42□□□□□ -0.74
CACNA1C-211ENST00000399617 ODF3BA8MYP8 253 aa10.42□□□□□ -0.74
CACNA1C-211ENST00000399617 K7EP13 123 aa10.42□□□□□ -0.74
CACNA1C-211ENST00000399617 Q6ZUT4 128 aa10.42□□□□□ -0.74
CACNA1C-211ENST00000399617 Q0VG73 95 aa10.42□□□□□ -0.74
CACNA1C-211ENST00000399617 LOC100131303A0A0U1RQF7 123 aa10.41□□□□□ -0.74
CACNA1C-211ENST00000399617 K7EP34 96 aa10.41□□□□□ -0.74
CACNA1C-211ENST00000399617 C11orf52Q96A22 123 aa10.41□□□□□ -0.74
CACNA1C-211ENST00000399617 C14orf132Q9NPU4 83 aa10.41□□□□□ -0.74
CACNA1C-211ENST00000399617 NPSP0C0P6 89 aa10.41□□□□□ -0.74
CACNA1C-211ENST00000399617 TTTY13Q9BZ97 58 aa10.41□□□□□ -0.74
CACNA1C-211ENST00000399617 CACNA1HO95180 2353 aa10.41□□□□□ -0.74
CACNA1C-211ENST00000399617 DCANP1Q8TF63 244 aa10.41□□□□□ -0.74
CACNA1C-211ENST00000399617 CLUHP3Q96NS8 147 aa10.41□□□□□ -0.74
CACNA1C-211ENST00000399617 FUSP35637 526 aaKnown RBP eCLIP10.41□□□□□ -0.74
CACNA1C-211ENST00000399617 IGLV2-14P01704 120 aa10.4□□□□□ -0.74
CACNA1C-211ENST00000399617 CFPP27918 469 aa10.4□□□□□ -0.74
CACNA1C-211ENST00000399617 H3BMG7 143 aa10.4□□□□□ -0.74
CACNA1C-211ENST00000399617 C11orf71Q6IPW1 123 aa10.4□□□□□ -0.74
CACNA1C-211ENST00000399617 TRBV6-1A0A0K0K1D8 114 aa10.4□□□□□ -0.74
CACNA1C-211ENST00000399617 NDUFB1O75438 58 aa10.4□□□□□ -0.74
CACNA1C-211ENST00000399617 IGLC2P0DOY2 106 aa10.4□□□□□ -0.74
CACNA1C-211ENST00000399617 IGLC3P0DOY3 106 aa10.4□□□□□ -0.74
CACNA1C-211ENST00000399617 MIR7-3HGQ8N6C7 128 aa10.4□□□□□ -0.74
CACNA1C-211ENST00000399617 AVPP01185 164 aa10.4□□□□□ -0.74
CACNA1C-211ENST00000399617 EDN2P20800 178 aa10.4□□□□□ -0.74
CACNA1C-211ENST00000399617 LGALS9BQ3B8N2 356 aa10.39□□□□□ -0.75
CACNA1C-211ENST00000399617 LGALS9CQ6DKI2 356 aa10.39□□□□□ -0.75
CACNA1C-211ENST00000399617 TNRC6BQ9UPQ9 1833 aaKnown RBP10.39□□□□□ -0.75
CACNA1C-211ENST00000399617 TRAV10A0A0B4J240 114 aa10.39□□□□□ -0.75
CACNA1C-211ENST00000399617 SPINK6Q6UWN8 80 aa10.39□□□□□ -0.75
CACNA1C-211ENST00000399617 CHCHD10Q8WYQ3 142 aaPredicted RBP10.39□□□□□ -0.75
CACNA1C-211ENST00000399617 SIVA1O15304 175 aa10.39□□□□□ -0.75
CACNA1C-211ENST00000399617 XAGE1AQ9HD64 81 aa10.39□□□□□ -0.75
CACNA1C-211ENST00000399617 UBE2D4Q9Y2X8 147 aa10.39□□□□□ -0.75
CACNA1C-211ENST00000399617 HERV-K104P63124 156 aa10.38□□□□□ -0.75
CACNA1C-211ENST00000399617 SMIM20Q8N5G0 67 aa10.38□□□□□ -0.75
CACNA1C-211ENST00000399617 LENEPQ9Y5L5 61 aa10.38□□□□□ -0.75
CACNA1C-211ENST00000399617 HIVEP2P31629 2446 aa10.38□□□□□ -0.75
CACNA1C-211ENST00000399617 TMEM89A2RUT3 159 aa10.38□□□□□ -0.75
CACNA1C-211ENST00000399617 IGLV2-8P01709 118 aa10.38□□□□□ -0.75
CACNA1C-211ENST00000399617 A0A1W2PPM0 123 aa10.37□□□□□ -0.75
CACNA1C-211ENST00000399617 IGKV3D-7A0A0C4DH55 119 aa10.37□□□□□ -0.75
CACNA1C-211ENST00000399617 ZNF80P51504 273 aaPredicted RBP10.37□□□□□ -0.75
CACNA1C-211ENST00000399617 Q8N976 141 aa10.37□□□□□ -0.75
CACNA1C-211ENST00000399617 C7orf33Q8WU49 177 aa10.37□□□□□ -0.75
CACNA1C-211ENST00000399617 C14orf177Q52M58 125 aa10.37□□□□□ -0.75
CACNA1C-211ENST00000399617 NTN5Q8WTR8 489 aaPredicted RBP10.37□□□□□ -0.75
CACNA1C-211ENST00000399617 BVES-AS1Q5T3Y7 98 aa10.37□□□□□ -0.75
CACNA1C-211ENST00000399617 BRK1Q8WUW1 75 aa10.36□□□□□ -0.75
CACNA1C-211ENST00000399617 Q6ZVH6 145 aa10.36□□□□□ -0.75
CACNA1C-211ENST00000399617 DIRC1Q969H9 104 aa10.36□□□□□ -0.75
CACNA1C-211ENST00000399617 IGKV2-28A0A075B6P5 120 aa10.36□□□□□ -0.75
CACNA1C-211ENST00000399617 IGKV2D-28P01615 120 aa10.36□□□□□ -0.75
CACNA1C-211ENST00000399617 IGHV4-30-4P0DP06 118 aa10.36□□□□□ -0.75
CACNA1C-211ENST00000399617 KPRPQ5T749 579 aaPredicted RBP10.36□□□□□ -0.75
CACNA1C-211ENST00000399617 TRBV10-1A0A0K0K1A3 114 aa10.35□□□□□ -0.75
CACNA1C-211ENST00000399617 PRR4Q16378 134 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms