RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 GCSHP23434 173 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 GAGE4Q13068 117 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 SPINK13Q1W4C9 94 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 Q8N2B8 174 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 PRO0461Q9UI25 63 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 A0A1B0GWB2 263 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 CD7P09564 240 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 ZFAND6Q6FIF0 208 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 AMTNQ6UX39 209 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 PHLDA1Q8WV24 401 aaPredicted RBP8.76□□□□□ -1.01
COL25A1-202ENST00000399127 IFI27L1Q96BM0 104 aa8.76□□□□□ -1.01
COL25A1-202ENST00000399127 NXT2Q9NPJ8 142 aaKnown RBP8.76□□□□□ -1.01
COL25A1-202ENST00000399127 ANK3Q12955 4377 aaKnown RBP8.75□□□□□ -1.01
COL25A1-202ENST00000399127 E9PLD3 99 aa8.75□□□□□ -1.01
COL25A1-202ENST00000399127 Q6ZSV7 163 aa8.75□□□□□ -1.01
COL25A1-202ENST00000399127 KLHL30-AS1Q8NEE0 82 aa8.75□□□□□ -1.01
COL25A1-202ENST00000399127 TMEM158Q8WZ71 300 aa8.75□□□□□ -1.01
COL25A1-202ENST00000399127 JPT2Q9H910 190 aa8.75□□□□□ -1.01
COL25A1-202ENST00000399127 ESM1Q9NQ30 184 aa8.75□□□□□ -1.01
COL25A1-202ENST00000399127 LY6G6DO95868 133 aa8.75□□□□□ -1.01
COL25A1-202ENST00000399127 RPL39LQ96EH5 51 aaKnown RBP8.75□□□□□ -1.01
COL25A1-202ENST00000399127 IGLV2-18A0A075B6J9 118 aa8.74□□□□□ -1.01
COL25A1-202ENST00000399127 LINC01619G3V211 115 aa8.74□□□□□ -1.01
COL25A1-202ENST00000399127 Q8N8P6 123 aa8.74□□□□□ -1.01
COL25A1-202ENST00000399127 A0A1W2PRX2 142 aa8.74□□□□□ -1.01
COL25A1-202ENST00000399127 FCER1GP30273 86 aa8.74□□□□□ -1.01
COL25A1-202ENST00000399127 PCP2Q8IVA1 136 aa8.74□□□□□ -1.01
COL25A1-202ENST00000399127 TMEM86BQ8N661 226 aa8.74□□□□□ -1.01
COL25A1-202ENST00000399127 DPH3P1Q9H4G8 78 aa8.74□□□□□ -1.01
COL25A1-202ENST00000399127 DKK2Q9UBU2 259 aa8.74□□□□□ -1.01
COL25A1-202ENST00000399127 KNCNA6PVL3 124 aa8.73□□□□□ -1.01
COL25A1-202ENST00000399127 DEFB104AQ8WTQ1 72 aa8.73□□□□□ -1.01
COL25A1-202ENST00000399127 DLX4Q92988 240 aaPredicted RBP8.73□□□□□ -1.01
COL25A1-202ENST00000399127 JMJD1CQ15652 2540 aa8.73□□□□□ -1.01
COL25A1-202ENST00000399127 A0A087WWL8 130 aa8.73□□□□□ -1.01
COL25A1-202ENST00000399127 C5orf47Q569G3 176 aa8.73□□□□□ -1.01
COL25A1-202ENST00000399127 RASL10AQ92737 203 aa8.73□□□□□ -1.01
COL25A1-202ENST00000399127 NHP2Q9NX24 153 aaKnown RBP8.73□□□□□ -1.01
COL25A1-202ENST00000399127 MDFICQ9P1T7 246 aa8.73□□□□□ -1.01
COL25A1-202ENST00000399127 SETXQ7Z333 2677 aaKnown RBP8.72□□□□□ -1.01
COL25A1-202ENST00000399127 IGLL5B9A064 214 aa8.72□□□□□ -1.01
COL25A1-202ENST00000399127 TMEM61Q8N0U2 210 aa8.72□□□□□ -1.01
COL25A1-202ENST00000399127 C4orf3Q8WVX3 66 aa8.72□□□□□ -1.01
COL25A1-202ENST00000399127 LINC01546A6NGU7 62 aa8.72□□□□□ -1.01
COL25A1-202ENST00000399127 HTN1P15515 57 aa8.72□□□□□ -1.01
COL25A1-202ENST00000399127 DEFB131AP59861 70 aa8.72□□□□□ -1.01
COL25A1-202ENST00000399127 LAGE3Q14657 143 aa8.72□□□□□ -1.01
COL25A1-202ENST00000399127 NFE4Q86UQ8 179 aa8.72□□□□□ -1.01
COL25A1-202ENST00000399127 A4D1N5 150 aa8.71□□□□□ -1.02
COL25A1-202ENST00000399127 PRSS1P07477 247 aa8.71□□□□□ -1.02
COL25A1-202ENST00000399127 NMUP48645 174 aa8.71□□□□□ -1.02
COL25A1-202ENST00000399127 LGALS9BQ3B8N2 356 aa8.71□□□□□ -1.02
COL25A1-202ENST00000399127 LGALS9CQ6DKI2 356 aa8.71□□□□□ -1.02
COL25A1-202ENST00000399127 Q8N1Y9 231 aa8.71□□□□□ -1.02
COL25A1-202ENST00000399127 TRBV20-1A0A075B6N2 111 aa8.71□□□□□ -1.02
COL25A1-202ENST00000399127 MED14OSP0DP75 135 aa8.71□□□□□ -1.02
COL25A1-202ENST00000399127 SUMO2P61956 95 aaKnown RBP8.71□□□□□ -1.02
COL25A1-202ENST00000399127 FAM74A4Q5TZK3 123 aa8.71□□□□□ -1.02
COL25A1-202ENST00000399127 ATP6V0E2Q8NHE4 81 aa8.71□□□□□ -1.02
COL25A1-202ENST00000399127 SMIM2Q9BVW6 85 aa8.71□□□□□ -1.02
COL25A1-202ENST00000399127 CSDC2Q9Y534 153 aaKnown RBP8.71□□□□□ -1.02
COL25A1-202ENST00000399127 K7EMI3 77 aa8.7□□□□□ -1.02
COL25A1-202ENST00000399127 NOTCH3Q9UM47 2321 aa8.7□□□□□ -1.02
COL25A1-202ENST00000399127 PRM2P04554 102 aa8.7□□□□□ -1.02
COL25A1-202ENST00000399127 NDUFV3P56181 108 aaKnown RBP8.7□□□□□ -1.02
COL25A1-202ENST00000399127 PTH2Q96A98 100 aa8.7□□□□□ -1.02
COL25A1-202ENST00000399127 PEMTQ9UBM1 199 aa8.7□□□□□ -1.02
COL25A1-202ENST00000399127 IGHV3-16A0A0C4DH30 117 aa8.69□□□□□ -1.02
COL25A1-202ENST00000399127 F5H697 171 aa8.69□□□□□ -1.02
COL25A1-202ENST00000399127 CD28P10747 220 aa8.69□□□□□ -1.02
COL25A1-202ENST00000399127 DYNLRB2Q8TF09 96 aa8.69□□□□□ -1.02
COL25A1-202ENST00000399127 ODF3Q96PU9 254 aa8.69□□□□□ -1.02
COL25A1-202ENST00000399127 DUSP14O95147 198 aaKnown RBP8.69□□□□□ -1.02
COL25A1-202ENST00000399127 NXPH4O95158 308 aa8.69□□□□□ -1.02
COL25A1-202ENST00000399127 RBMY1A1P0DJD3 496 aaKnown RBP8.69□□□□□ -1.02
COL25A1-202ENST00000399127 RBMY1CP0DJD4 496 aa8.69□□□□□ -1.02
COL25A1-202ENST00000399127 LINC00315P59091 139 aa8.69□□□□□ -1.02
COL25A1-202ENST00000399127 RBMY1FQ15415 496 aaKnown RBP8.69□□□□□ -1.02
COL25A1-202ENST00000399127 KIR2DL4Q99706 377 aa8.69□□□□□ -1.02
COL25A1-202ENST00000399127 VCX2Q9H322 139 aa8.69□□□□□ -1.02
COL25A1-202ENST00000399127 KIF25-AS1Q9Y6Z4 181 aa8.69□□□□□ -1.02
COL25A1-202ENST00000399127 HIVEP2P31629 2446 aa8.68□□□□□ -1.02
COL25A1-202ENST00000399127 OTOGQ6ZRI0 2925 aa8.68□□□□□ -1.02
COL25A1-202ENST00000399127 IGHV1OR15-1A0A075B7D0 117 aa8.68□□□□□ -1.02
COL25A1-202ENST00000399127 TRAV25A0A0B4J276 109 aa8.68□□□□□ -1.02
COL25A1-202ENST00000399127 INAFM1C9JVW0 142 aa8.68□□□□□ -1.02
COL25A1-202ENST00000399127 RHODO00212 210 aa8.68□□□□□ -1.02
COL25A1-202ENST00000399127 TMEM160Q9NX00 188 aa8.68□□□□□ -1.02
COL25A1-202ENST00000399127 SMCPP49901 116 aaPredicted RBP8.67□□□□□ -1.02
COL25A1-202ENST00000399127 SUMO4Q6EEV6 95 aa8.67□□□□□ -1.02
COL25A1-202ENST00000399127 CHAC1Q9BUX1 264 aa8.67□□□□□ -1.02
COL25A1-202ENST00000399127 RBMY1BA6NDE4 496 aaKnown RBP8.66□□□□□ -1.02
COL25A1-202ENST00000399127 RBMY1EA6NEQ0 496 aaKnown RBP8.66□□□□□ -1.02
COL25A1-202ENST00000399127 RNASE1P07998 156 aaKnown RBP8.66□□□□□ -1.02
COL25A1-202ENST00000399127 RBMY1DP0C7P1 496 aaKnown RBP8.66□□□□□ -1.02
COL25A1-202ENST00000399127 C9orf85Q96MD7 179 aa8.66□□□□□ -1.02
COL25A1-202ENST00000399127 CITED2Q99967 270 aaPredicted RBP8.66□□□□□ -1.02
COL25A1-202ENST00000399127 H3BMM0 161 aa8.66□□□□□ -1.02
COL25A1-202ENST00000399127 DEFB114Q30KQ6 69 aa8.66□□□□□ -1.02
COL25A1-202ENST00000399127 HLA-DRB4P13762 266 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms