RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 SOCS3O14543 225 aa11.15□□□□□ -0.62
RPRD1A-202ENST00000399022 ACYP1P07311 99 aa11.15□□□□□ -0.62
RPRD1A-202ENST00000399022 FBXL19-AS1Q494R0 122 aa11.15□□□□□ -0.62
RPRD1A-202ENST00000399022 STHQ8IWL8 128 aa11.15□□□□□ -0.62
RPRD1A-202ENST00000399022 TRGV2A0A075B6R0 118 aa11.15□□□□□ -0.62
RPRD1A-202ENST00000399022 LENEPQ9Y5L5 61 aa11.15□□□□□ -0.62
RPRD1A-202ENST00000399022 TRBV7-3A0A075B6L6 115 aa11.15□□□□□ -0.63
RPRD1A-202ENST00000399022 IGHV3-16A0A0C4DH30 117 aa11.15□□□□□ -0.63
RPRD1A-202ENST00000399022 H3BT86 120 aa11.15□□□□□ -0.63
RPRD1A-202ENST00000399022 J3KT08 172 aa11.15□□□□□ -0.63
RPRD1A-202ENST00000399022 NEXN-AS1Q8NBZ9 246 aa11.15□□□□□ -0.63
RPRD1A-202ENST00000399022 LAMA1P25391 3075 aa11.14□□□□□ -0.63
RPRD1A-202ENST00000399022 TINCRA0A1B0GVN0 87 aa11.14□□□□□ -0.63
RPRD1A-202ENST00000399022 IGHV3-53P01767 116 aa11.14□□□□□ -0.63
RPRD1A-202ENST00000399022 IGHV4-59P01825 116 aa11.14□□□□□ -0.63
RPRD1A-202ENST00000399022 TMEM86BQ8N661 226 aa11.14□□□□□ -0.63
RPRD1A-202ENST00000399022 VPS13AQ96RL7 3174 aa11.13□□□□□ -0.63
RPRD1A-202ENST00000399022 PF4P02776 101 aa11.13□□□□□ -0.63
RPRD1A-202ENST00000399022 S100A7L2Q5SY68 101 aa11.13□□□□□ -0.63
RPRD1A-202ENST00000399022 UBE2E2Q96LR5 201 aa11.13□□□□□ -0.63
RPRD1A-202ENST00000399022 IGHV1OR15-1A0A075B7D0 117 aa11.13□□□□□ -0.63
RPRD1A-202ENST00000399022 SLC25A29Q8N8R3 303 aa11.13□□□□□ -0.63
RPRD1A-202ENST00000399022 LRRK2Q5S007 2527 aa11.13□□□□□ -0.63
RPRD1A-202ENST00000399022 IGKV3D-7A0A0C4DH55 119 aa11.12□□□□□ -0.63
RPRD1A-202ENST00000399022 RHOHQ15669 191 aa11.12□□□□□ -0.63
RPRD1A-202ENST00000399022 MRPL53Q96EL3 112 aaKnown RBP11.12□□□□□ -0.63
RPRD1A-202ENST00000399022 OVOL2Q9BRP0 275 aa11.12□□□□□ -0.63
RPRD1A-202ENST00000399022 JPT2Q9H910 190 aa11.12□□□□□ -0.63
RPRD1A-202ENST00000399022 A0A1B0GX51 115 aa11.12□□□□□ -0.63
RPRD1A-202ENST00000399022 RPL36AP83881 106 aaKnown RBP11.12□□□□□ -0.63
RPRD1A-202ENST00000399022 CDSNQ15517 529 aa11.12□□□□□ -0.63
RPRD1A-202ENST00000399022 RPL36ALQ969Q0 106 aaKnown RBP11.12□□□□□ -0.63
RPRD1A-202ENST00000399022 TIMM17AQ99595 171 aa11.12□□□□□ -0.63
RPRD1A-202ENST00000399022 Q9H8V8 135 aa11.12□□□□□ -0.63
RPRD1A-202ENST00000399022 VCANP13611 3396 aa11.11□□□□□ -0.63
RPRD1A-202ENST00000399022 ABCA12Q86UK0 2595 aa11.11□□□□□ -0.63
RPRD1A-202ENST00000399022 PRB1P04280 392 aa11.11□□□□□ -0.63
RPRD1A-202ENST00000399022 HOXD3P31249 432 aaPredicted RBP11.11□□□□□ -0.63
RPRD1A-202ENST00000399022 DEFB112Q30KQ8 113 aa11.11□□□□□ -0.63
RPRD1A-202ENST00000399022 HIVEP2P31629 2446 aa11.11□□□□□ -0.63
RPRD1A-202ENST00000399022 SIRPDQ9H106 197 aa11.11□□□□□ -0.63
RPRD1A-202ENST00000399022 POLQO75417 2590 aa11.11□□□□□ -0.63
RPRD1A-202ENST00000399022 LGALS9O00182 355 aa11.11□□□□□ -0.63
RPRD1A-202ENST00000399022 ZNF415Q09FC8 603 aa11.11□□□□□ -0.63
RPRD1A-202ENST00000399022 IGHV7-4-1A0A0J9YVY3 117 aa11.1□□□□□ -0.63
RPRD1A-202ENST00000399022 C5orf56Q8N8D9 126 aa11.1□□□□□ -0.63
RPRD1A-202ENST00000399022 TRGV1A0A0A0MS02 117 aa11.1□□□□□ -0.63
RPRD1A-202ENST00000399022 PFN2P35080 140 aa11.1□□□□□ -0.63
RPRD1A-202ENST00000399022 LAMTOR3Q9UHA4 124 aa11.1□□□□□ -0.63
RPRD1A-202ENST00000399022 ADAMTS20P59510 1910 aa11.1□□□□□ -0.63
RPRD1A-202ENST00000399022 RHODO00212 210 aa11.1□□□□□ -0.63
RPRD1A-202ENST00000399022 CRYGBP07316 175 aa11.1□□□□□ -0.63
RPRD1A-202ENST00000399022 IGHV3-33P01772 117 aa11.1□□□□□ -0.63
RPRD1A-202ENST00000399022 SRSF2Q01130 221 aaKnown RBP11.1□□□□□ -0.63
RPRD1A-202ENST00000399022 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.09□□□□□ -0.63
RPRD1A-202ENST00000399022 A0A0B4J2C4 111 aa11.09□□□□□ -0.63
RPRD1A-202ENST00000399022 IGKV2-29A2NJV5 120 aaPredicted RBP11.09□□□□□ -0.63
RPRD1A-202ENST00000399022 C9orf47Q6ZRZ4 202 aa11.09□□□□□ -0.63
RPRD1A-202ENST00000399022 MRPS12O15235 138 aaKnown RBP11.09□□□□□ -0.63
RPRD1A-202ENST00000399022 C19orf84I3L1E1 186 aa11.09□□□□□ -0.63
RPRD1A-202ENST00000399022 TRBV12-3P01733 135 aa11.09□□□□□ -0.63
RPRD1A-202ENST00000399022 GATA3P23771 443 aa11.09□□□□□ -0.63
RPRD1A-202ENST00000399022 NSUN5P1Q3KNT7 163 aa11.09□□□□□ -0.63
RPRD1A-202ENST00000399022 NFE4Q86UQ8 179 aa11.09□□□□□ -0.63
RPRD1A-202ENST00000399022 AJUBAQ96IF1 538 aa11.09□□□□□ -0.63
RPRD1A-202ENST00000399022 DNAJC30Q96LL9 226 aa11.09□□□□□ -0.63
RPRD1A-202ENST00000399022 ATOX1O00244 68 aa11.08□□□□□ -0.63
RPRD1A-202ENST00000399022 C6orf226Q5I0X4 101 aa11.08□□□□□ -0.63
RPRD1A-202ENST00000399022 TNRC6BQ9UPQ9 1833 aaKnown RBP11.08□□□□□ -0.64
RPRD1A-202ENST00000399022 LMO4P61968 165 aa11.08□□□□□ -0.64
RPRD1A-202ENST00000399022 UNQ9165/PRO28630Q6UXU0 137 aa11.08□□□□□ -0.64
RPRD1A-202ENST00000399022 IGHV3-30-3P0DP02 117 aa11.08□□□□□ -0.64
RPRD1A-202ENST00000399022 DEFB136Q30KP8 78 aa11.08□□□□□ -0.64
RPRD1A-202ENST00000399022 XCL2Q9UBD3 114 aa11.08□□□□□ -0.64
RPRD1A-202ENST00000399022 Q6ZS46 218 aa11.07□□□□□ -0.64
RPRD1A-202ENST00000399022 ODF3BA8MYP8 253 aa11.07□□□□□ -0.64
RPRD1A-202ENST00000399022 Q96MF0 132 aa11.06□□□□□ -0.64
RPRD1A-202ENST00000399022 TRIAP1O43715 76 aa11.06□□□□□ -0.64
RPRD1A-202ENST00000399022 NRACQ8N912 160 aa11.06□□□□□ -0.64
RPRD1A-202ENST00000399022 TET2Q6N021 2002 aaPredicted RBP11.06□□□□□ -0.64
RPRD1A-202ENST00000399022 TRGV4A0A0C4DH28 118 aa11.06□□□□□ -0.64
RPRD1A-202ENST00000399022 LINC00643Q86TS7 51 aa11.06□□□□□ -0.64
RPRD1A-202ENST00000399022 LY6LH3BQJ8 138 aa11.06□□□□□ -0.64
RPRD1A-202ENST00000399022 IGF1P05019 195 aa11.06□□□□□ -0.64
RPRD1A-202ENST00000399022 HAMPP81172 84 aa11.06□□□□□ -0.64
RPRD1A-202ENST00000399022 ZNRF2Q8NHG8 242 aa11.06□□□□□ -0.64
RPRD1A-202ENST00000399022 C10orf105Q8TEF2 133 aa11.06□□□□□ -0.64
RPRD1A-202ENST00000399022 A0A0J9YXY3 114 aa11.05□□□□□ -0.64
RPRD1A-202ENST00000399022 RPL35AP18077 110 aaKnown RBP11.05□□□□□ -0.64
RPRD1A-202ENST00000399022 UBL5Q9BZL1 73 aa11.05□□□□□ -0.64
RPRD1A-202ENST00000399022 IGHV3-30P01768 117 aa11.05□□□□□ -0.64
RPRD1A-202ENST00000399022 IGHV3-30-5P0DP03 117 aa11.05□□□□□ -0.64
RPRD1A-202ENST00000399022 CCDC140Q96MF4 163 aa11.05□□□□□ -0.64
RPRD1A-202ENST00000399022 CDIP1Q9H305 208 aa11.05□□□□□ -0.64
RPRD1A-202ENST00000399022 TRAV13-2A0A0B4J235 113 aa11.04□□□□□ -0.64
RPRD1A-202ENST00000399022 C1orf43Q9BWL3 253 aa11.04□□□□□ -0.64
RPRD1A-202ENST00000399022 SPANXCQ9NY87 97 aa11.04□□□□□ -0.64
RPRD1A-202ENST00000399022 Q6ZQT7 251 aa11.04□□□□□ -0.64
RPRD1A-202ENST00000399022 C11orf21Q9P2W6 132 aa11.04□□□□□ -0.64
RPRD1A-202ENST00000399022 UQCRQO14949 82 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 538.2 ms