RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 DEFB136Q30KP8 78 aa14.46□□□□□ -0.09
COL13A1-205ENST00000398978 ZNF876PQ49A33 203 aa14.45□□□□□ -0.1
COL13A1-205ENST00000398978 RNASE13Q5GAN3 156 aaKnown RBP14.45□□□□□ -0.1
COL13A1-205ENST00000398978 KNCNA6PVL3 124 aa14.45□□□□□ -0.1
COL13A1-205ENST00000398978 M0QY20 66 aa14.45□□□□□ -0.1
COL13A1-205ENST00000398978 C18orf65Q6ZTR6 163 aa14.45□□□□□ -0.1
COL13A1-205ENST00000398978 Q9UF83 564 aa14.45□□□□□ -0.1
COL13A1-205ENST00000398978 B4DSR2 109 aa14.44□□□□□ -0.1
COL13A1-205ENST00000398978 HERVK_113P61574 105 aa14.44□□□□□ -0.1
COL13A1-205ENST00000398978 SNRPD3P62318 126 aaKnown RBP14.44□□□□□ -0.1
COL13A1-205ENST00000398978 GAGE12HA6NDE8 117 aa14.44□□□□□ -0.1
COL13A1-205ENST00000398978 K7EMT4 169 aa14.44□□□□□ -0.1
COL13A1-205ENST00000398978 SMCPP49901 116 aaPredicted RBP14.44□□□□□ -0.1
COL13A1-205ENST00000398978 C9orf85Q96MD7 179 aa14.44□□□□□ -0.1
COL13A1-205ENST00000398978 DUX3Q96PT4 197 aa14.44□□□□□ -0.1
COL13A1-205ENST00000398978 TRBV7-9A0A0J9YWB2 115 aa14.43□□□□□ -0.1
COL13A1-205ENST00000398978 H7C2G1 150 aa14.43□□□□□ -0.1
COL13A1-205ENST00000398978 SAMD13Q5VXD3 122 aa14.43□□□□□ -0.1
COL13A1-205ENST00000398978 CEMP1Q6PRD7 247 aaPredicted RBP14.43□□□□□ -0.1
COL13A1-205ENST00000398978 C2CD3Q4AC94 2353 aa14.43□□□□□ -0.1
COL13A1-205ENST00000398978 IGHV1OR15-1A0A075B7D0 117 aa14.43□□□□□ -0.1
COL13A1-205ENST00000398978 ADARB2-AS1A8MUL3 147 aa14.43□□□□□ -0.1
COL13A1-205ENST00000398978 EPG5Q9HCE0 2579 aa14.43□□□□□ -0.1
COL13A1-205ENST00000398978 TRBV27A0A0K0K1C4 114 aa14.43□□□□□ -0.1
COL13A1-205ENST00000398978 LGALS9O00182 355 aa14.43□□□□□ -0.1
COL13A1-205ENST00000398978 RBMY1A1P0DJD3 496 aaKnown RBP14.43□□□□□ -0.1
COL13A1-205ENST00000398978 RBMY1CP0DJD4 496 aa14.43□□□□□ -0.1
COL13A1-205ENST00000398978 UBE2D1P51668 147 aa14.43□□□□□ -0.1
COL13A1-205ENST00000398978 RBMY1FQ15415 496 aaKnown RBP14.43□□□□□ -0.1
COL13A1-205ENST00000398978 LINC01619G3V211 115 aa14.42□□□□□ -0.1
COL13A1-205ENST00000398978 NDUFS8O00217 210 aa14.42□□□□□ -0.1
COL13A1-205ENST00000398978 BRI3O95415 125 aa14.42□□□□□ -0.1
COL13A1-205ENST00000398978 ZNF462Q96JM2 2506 aa14.42□□□□□ -0.1
COL13A1-205ENST00000398978 K7EQG2 157 aa14.42□□□□□ -0.1
COL13A1-205ENST00000398978 NAV2Q8IVL1 2488 aa14.42□□□□□ -0.1
COL13A1-205ENST00000398978 A0A0J9YXV3 536 aa14.41□□□□□ -0.1
COL13A1-205ENST00000398978 J3QQQ9 107 aa14.41□□□□□ -0.1
COL13A1-205ENST00000398978 A6NJY4 79 aa14.41□□□□□ -0.1
COL13A1-205ENST00000398978 NDUFA11Q86Y39 141 aa14.41□□□□□ -0.1
COL13A1-205ENST00000398978 CHD6Q8TD26 2715 aa14.41□□□□□ -0.1
COL13A1-205ENST00000398978 ZNF469Q96JG9 3925 aaPredicted RBP14.41□□□□□ -0.1
COL13A1-205ENST00000398978 CFC1BP0CG36 223 aa14.4□□□□□ -0.1
COL13A1-205ENST00000398978 CFC1P0CG37 223 aa14.4□□□□□ -0.1
COL13A1-205ENST00000398978 TMEM141Q96I45 108 aa14.4□□□□□ -0.1
COL13A1-205ENST00000398978 RAX2Q96IS3 184 aa14.4□□□□□ -0.1
COL13A1-205ENST00000398978 TIMM17AQ99595 171 aa14.4□□□□□ -0.1
COL13A1-205ENST00000398978 BEX4Q9NWD9 120 aaPredicted RBP14.4□□□□□ -0.1
COL13A1-205ENST00000398978 NF1P21359 2839 aa14.4□□□□□ -0.1
COL13A1-205ENST00000398978 IGHV3-30P01768 117 aa14.4□□□□□ -0.1
COL13A1-205ENST00000398978 IGHV3-30-5P0DP03 117 aa14.4□□□□□ -0.1
COL13A1-205ENST00000398978 LGALS3P17931 250 aaKnown RBP14.4□□□□□ -0.1
COL13A1-205ENST00000398978 HOXD3P31249 432 aaPredicted RBP14.4□□□□□ -0.1
COL13A1-205ENST00000398978 SYT8Q8NBV8 401 aa14.4□□□□□ -0.1
COL13A1-205ENST00000398978 SIGMAR1Q99720 223 aa14.4□□□□□ -0.1
COL13A1-205ENST00000398978 DLX4Q92988 240 aaPredicted RBP14.39□□□□□ -0.11
COL13A1-205ENST00000398978 PRRC2AP48634 2157 aaKnown RBP14.39□□□□□ -0.11
COL13A1-205ENST00000398978 AMELXQ99217 191 aa14.39□□□□□ -0.11
COL13A1-205ENST00000398978 TRAV2A0A0B4J234 112 aa14.38□□□□□ -0.11
COL13A1-205ENST00000398978 NFE4Q86UQ8 179 aa14.38□□□□□ -0.11
COL13A1-205ENST00000398978 SLURP1P55000 103 aa14.38□□□□□ -0.11
COL13A1-205ENST00000398978 TCL1BO95988 128 aa14.38□□□□□ -0.11
COL13A1-205ENST00000398978 RPL32P62910 135 aaKnown RBP14.37□□□□□ -0.11
COL13A1-205ENST00000398978 CFAP126Q5VTH2 177 aa14.37□□□□□ -0.11
COL13A1-205ENST00000398978 PAPPA-AS1Q5QFB9 102 aa14.37□□□□□ -0.11
COL13A1-205ENST00000398978 SPXQ9BT56 116 aa14.37□□□□□ -0.11
COL13A1-205ENST00000398978 AKAP9Q99996 3911 aa14.37□□□□□ -0.11
COL13A1-205ENST00000398978 SCGB1C2P0DMR2 95 aa14.36□□□□□ -0.11
COL13A1-205ENST00000398978 TCTEX1D4Q5JR98 221 aa14.36□□□□□ -0.11
COL13A1-205ENST00000398978 SLC25A29Q8N8R3 303 aa14.36□□□□□ -0.11
COL13A1-205ENST00000398978 TRBV6-5A0A0K0K1A5 114 aa14.36□□□□□ -0.11
COL13A1-205ENST00000398978 J3QR89 54 aa14.36□□□□□ -0.11
COL13A1-205ENST00000398978 DEFB131AP59861 70 aa14.36□□□□□ -0.11
COL13A1-205ENST00000398978 TRPT1Q86TN4 253 aaKnown RBP14.36□□□□□ -0.11
COL13A1-205ENST00000398978 C20orf203Q8NBC4 194 aa14.35□□□□□ -0.11
COL13A1-205ENST00000398978 NIPBLQ6KC79 2804 aaeCLIP14.35□□□□□ -0.11
COL13A1-205ENST00000398978 A4D1N5 150 aa14.35□□□□□ -0.11
COL13A1-205ENST00000398978 EIF4EBP3O60516 100 aaPredicted RBP14.35□□□□□ -0.11
COL13A1-205ENST00000398978 CCDC168Q8NDH2 2452 aa14.35□□□□□ -0.11
COL13A1-205ENST00000398978 A8MZ25 164 aa14.35□□□□□ -0.11
COL13A1-205ENST00000398978 ZNF22P17026 224 aaPredicted RBP14.35□□□□□ -0.11
COL13A1-205ENST00000398978 JMJD1CQ15652 2540 aa14.34□□□□□ -0.11
COL13A1-205ENST00000398978 IGLV4-3A0A075B6K6 122 aa14.34□□□□□ -0.11
COL13A1-205ENST00000398978 TRAV8-3A0A0A6YYJ7 113 aa14.34□□□□□ -0.11
COL13A1-205ENST00000398978 I3L3M4 83 aa14.34□□□□□ -0.11
COL13A1-205ENST00000398978 VCX2Q9H322 139 aa14.34□□□□□ -0.11
COL13A1-205ENST00000398978 KHDC1LQ5JSQ8 128 aa14.33□□□□□ -0.11
COL13A1-205ENST00000398978 IGHV3-38A0A0C4DH36 116 aa14.33□□□□□ -0.12
COL13A1-205ENST00000398978 TMEM223A0PJW6 202 aa14.33□□□□□ -0.12
COL13A1-205ENST00000398978 UBE2D3P61077 147 aa14.33□□□□□ -0.12
COL13A1-205ENST00000398978 UBE2D2P62837 147 aa14.33□□□□□ -0.12
COL13A1-205ENST00000398978 FOXI1Q12951 378 aa14.33□□□□□ -0.12
COL13A1-205ENST00000398978 Q6ZSN1 163 aa14.33□□□□□ -0.12
COL13A1-205ENST00000398978 PRB1P04280 392 aa14.33□□□□□ -0.12
COL13A1-205ENST00000398978 NPC2P61916 151 aa14.33□□□□□ -0.12
COL13A1-205ENST00000398978 NSUN5P1Q3KNT7 163 aa14.32□□□□□ -0.12
COL13A1-205ENST00000398978 RHODO00212 210 aa14.32□□□□□ -0.12
COL13A1-205ENST00000398978 FHL3Q13643 280 aa14.32□□□□□ -0.12
COL13A1-205ENST00000398978 MUSTN1Q8IVN3 82 aa14.32□□□□□ -0.12
COL13A1-205ENST00000398978 LINC01356Q8N9X3 169 aa14.32□□□□□ -0.12
COL13A1-205ENST00000398978 CD28P10747 220 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms