RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 TRGC1P0CF51 173 aa2.62□□□□□ -1.99
UBE3A-202ENST00000397954 RPL19P84098 196 aaKnown RBP2.62□□□□□ -1.99
UBE3A-202ENST00000397954 NDUFA5Q16718 116 aa2.62□□□□□ -1.99
UBE3A-202ENST00000397954 SPINK13Q1W4C9 94 aa2.62□□□□□ -1.99
UBE3A-202ENST00000397954 COX19Q49B96 90 aa2.62□□□□□ -1.99
UBE3A-202ENST00000397954 C14orf177Q52M58 125 aa2.62□□□□□ -1.99
UBE3A-202ENST00000397954 ADAMTSL4-AS1Q5T5F5 129 aa2.62□□□□□ -1.99
UBE3A-202ENST00000397954 WFDC10AQ9H1F0 79 aa2.62□□□□□ -1.99
UBE3A-202ENST00000397954 GTSF1LQ9H1H1 148 aa2.62□□□□□ -1.99
UBE3A-202ENST00000397954 SLC35B3Q9H1N7 401 aa2.62□□□□□ -1.99
UBE3A-202ENST00000397954 XCL2Q9UBD3 114 aa2.62□□□□□ -1.99
UBE3A-202ENST00000397954 TRAV9-1A0A075B6T8 112 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 IGHV3-66A0A0C4DH42 116 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 IGHV3-48P01763 117 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 DNAH10OSP0CZ25 163 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 GATA2P23769 480 aaPredicted RBP2.61□□□□□ -1.99
UBE3A-202ENST00000397954 RPL32P62910 135 aaKnown RBP2.61□□□□□ -1.99
UBE3A-202ENST00000397954 GDF5OSQ5U4N7 250 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 PACRGQ96M98 296 aaPredicted RBP2.61□□□□□ -1.99
UBE3A-202ENST00000397954 MED9Q9NWA0 146 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 IGHV3-49A0A0A0MS15 119 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 TRAV8-6A0A0B4J262 113 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 KRBOX1C9JBD0 128 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 K7EMI3 77 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 SIX6O95475 246 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 IGLV2-11P01706 119 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 PRB2P02812 416 aaPredicted RBP2.61□□□□□ -1.99
UBE3A-202ENST00000397954 AZU1P20160 251 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 CRYBA4P53673 196 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 FOXA3P55318 350 aaPredicted RBP2.61□□□□□ -1.99
UBE3A-202ENST00000397954 CD300CQ08708 224 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 Q0VG73 95 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 ZNF506Q5JVG8 444 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 RPL7L1Q6DKI1 246 aaKnown RBP2.61□□□□□ -1.99
UBE3A-202ENST00000397954 SMIM29Q86T20 159 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 PARLQ9H300 379 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 MEGF8Q7Z7M0 2845 aa2.61□□□□□ -1.99
UBE3A-202ENST00000397954 M0R381 172 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 ARPC5O15511 151 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 IFNA7P01567 189 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 PYYP10082 97 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 BCL2P10415 239 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 S100A1P23297 94 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 MEF2BQ02080 365 aaPredicted RBP2.6□□□□□ -1.99
UBE3A-202ENST00000397954 LINC01556Q5JQF7 62 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 LELP1Q5T871 98 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 RASL11AQ6T310 242 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 Q6ZTC4 211 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 SSX7Q7RTT5 188 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 NEGR1Q7Z3B1 354 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 MRPL55Q7Z7F7 128 aaKnown RBP2.6□□□□□ -1.99
UBE3A-202ENST00000397954 DAZ4Q86SG3 579 aaKnown RBP2.6□□□□□ -1.99
UBE3A-202ENST00000397954 PRNTQ86SH4 94 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 UBE2DNLQ8IWF7 75 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 GATD1Q8NB37 220 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 ZNF471Q9BX82 626 aaPredicted RBP2.6□□□□□ -1.99
UBE3A-202ENST00000397954 DAZ3Q9NR90 486 aaKnown RBP2.6□□□□□ -1.99
UBE3A-202ENST00000397954 GGTLC3B5MD39 225 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 F5H768 121 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 PHOX2AO14813 284 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 TYMSP04818 313 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 CTRLP40313 264 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 RANP62826 216 aaKnown RBP2.6□□□□□ -1.99
UBE3A-202ENST00000397954 RNF182Q8N6D2 247 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 AP1S3Q96PC3 154 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 OCR1Q9BZK8 76 aa2.6□□□□□ -1.99
UBE3A-202ENST00000397954 IGHV3OR16-13A0A075B7E8 117 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 IGHV3-74A0A0B4J1X5 117 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 IGHV3-53P01767 116 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 RNASE4P34096 147 aaKnown RBP2.59□□□□□ -1.99
UBE3A-202ENST00000397954 NKX2-5P52952 324 aaPredicted RBP2.59□□□□□ -1.99
UBE3A-202ENST00000397954 NANOS2P60321 138 aaKnown RBP2.59□□□□□ -1.99
UBE3A-202ENST00000397954 GOLT1AQ6ZVE7 132 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 SMIM15Q7Z3B0 74 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 BLNKQ8WV28 456 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 IMMP2LQ96T52 175 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 LAMTOR2Q9Y2Q5 125 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 TRGV2A0A075B6R0 118 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 A0A087X002 238 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 TRAV8-3A0A0A6YYJ7 113 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 NBDYA0A0U1RRE5 68 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 M0R2Z0 102 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 PAX4O43316 350 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 ZNF767PQ75MW2 155 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 ATP5L2Q7Z4Y8 100 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 EXOC3-AS1Q8N2X6 119 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 C9orf62Q8N4C0 152 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 ZNRF2Q8NHG8 242 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 BORCS7Q96B45 105 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 LINC00479Q96M42 142 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 OSTCQ9NRP0 149 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 HHLA3Q9XRX5 114 aa2.59□□□□□ -1.99
UBE3A-202ENST00000397954 IGKV3-7A0A075B6H7 116 aa2.59□□□□□ -2
UBE3A-202ENST00000397954 IGHV3OR16-8A0A075B7F1 116 aa2.59□□□□□ -2
UBE3A-202ENST00000397954 TRAV8-1A0A0A6YYK1 113 aa2.59□□□□□ -2
UBE3A-202ENST00000397954 TRAV12-3A0A0B4J271 114 aa2.59□□□□□ -2
UBE3A-202ENST00000397954 C19orf71A6NCJ1 209 aa2.59□□□□□ -2
UBE3A-202ENST00000397954 RBFOX3A6NFN3 312 aa2.59□□□□□ -2
UBE3A-202ENST00000397954 B4DEV8 164 aa2.59□□□□□ -2
UBE3A-202ENST00000397954 SNRPCP09234 159 aaKnown RBP2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms