RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 HOXD3P31249 432 aaPredicted RBP13.64□□□□□ -0.23
CHRFAM7A-202ENST00000397827 SPINK13Q1W4C9 94 aa13.64□□□□□ -0.23
CHRFAM7A-202ENST00000397827 MAPKAPK5-AS1Q8N8E1 139 aa13.64□□□□□ -0.23
CHRFAM7A-202ENST00000397827 MDFICQ9P1T7 246 aa13.64□□□□□ -0.23
CHRFAM7A-202ENST00000397827 CCDC179H3BU77 68 aa13.64□□□□□ -0.23
CHRFAM7A-202ENST00000397827 HIST1H4GQ99525 98 aa13.64□□□□□ -0.23
CHRFAM7A-202ENST00000397827 F5H697 171 aa13.63□□□□□ -0.23
CHRFAM7A-202ENST00000397827 GAGE12JA6NER3 117 aa13.63□□□□□ -0.23
CHRFAM7A-202ENST00000397827 F8VRH5 84 aa13.63□□□□□ -0.23
CHRFAM7A-202ENST00000397827 GAGE7O76087 117 aa13.63□□□□□ -0.23
CHRFAM7A-202ENST00000397827 GAGE12FP0CL80 117 aa13.63□□□□□ -0.23
CHRFAM7A-202ENST00000397827 GAGE12GP0CL81 117 aa13.63□□□□□ -0.23
CHRFAM7A-202ENST00000397827 GAGE12IP0CL82 117 aa13.63□□□□□ -0.23
CHRFAM7A-202ENST00000397827 GAGE4Q13068 117 aa13.63□□□□□ -0.23
CHRFAM7A-202ENST00000397827 DEFB136Q30KP8 78 aa13.63□□□□□ -0.23
CHRFAM7A-202ENST00000397827 FAM74A4Q5TZK3 123 aa13.63□□□□□ -0.23
CHRFAM7A-202ENST00000397827 C18orf65Q6ZTR6 163 aa13.63□□□□□ -0.23
CHRFAM7A-202ENST00000397827 TRBV20-1A0A075B6N2 111 aa13.62□□□□□ -0.23
CHRFAM7A-202ENST00000397827 H7C1H1 209 aa13.62□□□□□ -0.23
CHRFAM7A-202ENST00000397827 FSHBP01225 129 aa13.62□□□□□ -0.23
CHRFAM7A-202ENST00000397827 SUMO4Q6EEV6 95 aa13.62□□□□□ -0.23
CHRFAM7A-202ENST00000397827 CARD19Q96LW7 228 aa13.62□□□□□ -0.23
CHRFAM7A-202ENST00000397827 PLNP26678 52 aa13.62□□□□□ -0.23
CHRFAM7A-202ENST00000397827 NEXN-AS1Q8NBZ9 246 aa13.62□□□□□ -0.23
CHRFAM7A-202ENST00000397827 SFTA2Q6UW10 78 aa13.61□□□□□ -0.23
CHRFAM7A-202ENST00000397827 ZNF843Q8N446 348 aa13.61□□□□□ -0.23
CHRFAM7A-202ENST00000397827 POM121L12Q8N7R1 296 aa13.61□□□□□ -0.23
CHRFAM7A-202ENST00000397827 KIR2DL4Q99706 377 aa13.61□□□□□ -0.23
CHRFAM7A-202ENST00000397827 NBPF19A0A087WUL8 3843 aa13.61□□□□□ -0.23
CHRFAM7A-202ENST00000397827 TRAV12-1A0A0B4J245 112 aa13.61□□□□□ -0.23
CHRFAM7A-202ENST00000397827 ELANEP08246 267 aa13.61□□□□□ -0.23
CHRFAM7A-202ENST00000397827 Q8N1Y9 231 aa13.61□□□□□ -0.23
CHRFAM7A-202ENST00000397827 BAALCQ8WXS3 180 aa13.61□□□□□ -0.23
CHRFAM7A-202ENST00000397827 SONP18583 2426 aaKnown RBP13.61□□□□□ -0.23
CHRFAM7A-202ENST00000397827 PPDPFLQ8WWR9 84 aa13.6□□□□□ -0.23
CHRFAM7A-202ENST00000397827 UBE2E2Q96LR5 201 aa13.6□□□□□ -0.23
CHRFAM7A-202ENST00000397827 IGHV3-16A0A0C4DH30 117 aa13.6□□□□□ -0.23
CHRFAM7A-202ENST00000397827 DLX4Q92988 240 aaPredicted RBP13.6□□□□□ -0.23
CHRFAM7A-202ENST00000397827 DUSP14O95147 198 aaKnown RBP13.6□□□□□ -0.23
CHRFAM7A-202ENST00000397827 PPP1R17O96001 155 aa13.6□□□□□ -0.23
CHRFAM7A-202ENST00000397827 HLA-DRB4P13762 266 aa13.6□□□□□ -0.23
CHRFAM7A-202ENST00000397827 PSMB2P49721 201 aa13.6□□□□□ -0.23
CHRFAM7A-202ENST00000397827 HIST2H2BDQ6DRA6 164 aa13.6□□□□□ -0.23
CHRFAM7A-202ENST00000397827 HLA-DRB4X5D2U9 266 aa13.6□□□□□ -0.23
CHRFAM7A-202ENST00000397827 SLURP1P55000 103 aa13.59□□□□□ -0.23
CHRFAM7A-202ENST00000397827 APCP25054 2843 aa13.59□□□□□ -0.23
CHRFAM7A-202ENST00000397827 LGALS9O00182 355 aa13.59□□□□□ -0.23
CHRFAM7A-202ENST00000397827 MORN3Q6PF18 240 aaPredicted RBP13.59□□□□□ -0.23
CHRFAM7A-202ENST00000397827 RAX2Q96IS3 184 aa13.59□□□□□ -0.23
CHRFAM7A-202ENST00000397827 CUBNO60494 3623 aa13.59□□□□□ -0.23
CHRFAM7A-202ENST00000397827 TAL2Q16559 108 aa13.58□□□□□ -0.24
CHRFAM7A-202ENST00000397827 ODF3Q96PU9 254 aa13.58□□□□□ -0.24
CHRFAM7A-202ENST00000397827 C9orf85Q96MD7 179 aa13.58□□□□□ -0.24
CHRFAM7A-202ENST00000397827 DUX3Q96PT4 197 aa13.58□□□□□ -0.24
CHRFAM7A-202ENST00000397827 POLR2KP53803 58 aaKnown RBP13.57□□□□□ -0.24
CHRFAM7A-202ENST00000397827 NDUFV3P56181 108 aaKnown RBP13.57□□□□□ -0.24
CHRFAM7A-202ENST00000397827 IGHV1OR15-1A0A075B7D0 117 aa13.57□□□□□ -0.24
CHRFAM7A-202ENST00000397827 LOC107984156A0A0G2JMH3 177 aa13.57□□□□□ -0.24
CHRFAM7A-202ENST00000397827 RPL39P62891 51 aaKnown RBP13.57□□□□□ -0.24
CHRFAM7A-202ENST00000397827 DEFB113Q30KQ7 82 aa13.57□□□□□ -0.24
CHRFAM7A-202ENST00000397827 ARL17AQ8IVW1 177 aa13.57□□□□□ -0.24
CHRFAM7A-202ENST00000397827 CITED1Q99966 193 aa13.57□□□□□ -0.24
CHRFAM7A-202ENST00000397827 TP53TG1Q9Y2A0 90 aa13.57□□□□□ -0.24
CHRFAM7A-202ENST00000397827 SDHAF1A6NFY7 115 aa13.56□□□□□ -0.24
CHRFAM7A-202ENST00000397827 ZFP2Q6ZN57 461 aa13.56□□□□□ -0.24
CHRFAM7A-202ENST00000397827 TEN1Q86WV5 123 aa13.56□□□□□ -0.24
CHRFAM7A-202ENST00000397827 Q96MF0 132 aa13.56□□□□□ -0.24
CHRFAM7A-202ENST00000397827 PRRC2AP48634 2157 aaKnown RBP13.56□□□□□ -0.24
CHRFAM7A-202ENST00000397827 HTN1P15515 57 aa13.55□□□□□ -0.24
CHRFAM7A-202ENST00000397827 GAGE2BQ13066 116 aa13.55□□□□□ -0.24
CHRFAM7A-202ENST00000397827 ZNF56Q15929 161 aa13.55□□□□□ -0.24
CHRFAM7A-202ENST00000397827 GAGE2EQ4V326 116 aa13.55□□□□□ -0.24
CHRFAM7A-202ENST00000397827 YAE1D1Q9NRH1 226 aa13.55□□□□□ -0.24
CHRFAM7A-202ENST00000397827 GAGE2DQ9UEU5 116 aa13.55□□□□□ -0.24
CHRFAM7A-202ENST00000397827 KNCNA6PVL3 124 aa13.55□□□□□ -0.24
CHRFAM7A-202ENST00000397827 RHODO00212 210 aa13.55□□□□□ -0.24
CHRFAM7A-202ENST00000397827 TSHBP01222 138 aa13.55□□□□□ -0.24
CHRFAM7A-202ENST00000397827 EMP1P54849 157 aa13.55□□□□□ -0.24
CHRFAM7A-202ENST00000397827 ZNF256Q9Y2P7 627 aaPredicted RBP13.55□□□□□ -0.24
CHRFAM7A-202ENST00000397827 CRYGDP07320 174 aa13.54□□□□□ -0.24
CHRFAM7A-202ENST00000397827 VCX2Q9H322 139 aa13.54□□□□□ -0.24
CHRFAM7A-202ENST00000397827 CCDC168Q8NDH2 2452 aa13.54□□□□□ -0.24
CHRFAM7A-202ENST00000397827 TRBV7-3A0A075B6L6 115 aa13.54□□□□□ -0.24
CHRFAM7A-202ENST00000397827 VCYO14598 125 aa13.54□□□□□ -0.24
CHRFAM7A-202ENST00000397827 TTC32Q5I0X7 151 aa13.54□□□□□ -0.24
CHRFAM7A-202ENST00000397827 RNF152Q8N8N0 203 aa13.54□□□□□ -0.24
CHRFAM7A-202ENST00000397827 NF1P21359 2839 aa13.53□□□□□ -0.24
CHRFAM7A-202ENST00000397827 RBMY1A1P0DJD3 496 aaKnown RBP13.53□□□□□ -0.24
CHRFAM7A-202ENST00000397827 RBMY1CP0DJD4 496 aa13.53□□□□□ -0.24
CHRFAM7A-202ENST00000397827 RBMY1FQ15415 496 aaKnown RBP13.53□□□□□ -0.24
CHRFAM7A-202ENST00000397827 KHDC1LQ5JSQ8 128 aa13.53□□□□□ -0.24
CHRFAM7A-202ENST00000397827 ITPR3Q14573 2671 aa13.53□□□□□ -0.24
CHRFAM7A-202ENST00000397827 DEFB131AP59861 70 aa13.53□□□□□ -0.24
CHRFAM7A-202ENST00000397827 ZNF876PQ49A33 203 aa13.53□□□□□ -0.24
CHRFAM7A-202ENST00000397827 LINC01549A6NIU2 74 aa13.52□□□□□ -0.25
CHRFAM7A-202ENST00000397827 IGIPA6NJ69 53 aa13.52□□□□□ -0.25
CHRFAM7A-202ENST00000397827 M0QY20 66 aa13.52□□□□□ -0.25
CHRFAM7A-202ENST00000397827 PRM2P04554 102 aa13.52□□□□□ -0.25
CHRFAM7A-202ENST00000397827 AKAP9Q99996 3911 aa13.52□□□□□ -0.25
CHRFAM7A-202ENST00000397827 CHD6Q8TD26 2715 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms