RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 LINC00587B1AMM8 73 aa9.42□□□□□ -0.9
SEC13-209ENST00000397117 RHODO00212 210 aa9.42□□□□□ -0.9
SEC13-209ENST00000397117 RS1O15537 224 aa9.42□□□□□ -0.9
SEC13-209ENST00000397117 FABP4P15090 132 aa9.42□□□□□ -0.9
SEC13-209ENST00000397117 MRAP2Q96G30 205 aa9.42□□□□□ -0.9
SEC13-209ENST00000397117 PACRGQ96M98 296 aaPredicted RBP9.42□□□□□ -0.9
SEC13-209ENST00000397117 ALKBH7Q9BT30 221 aaPredicted RBP9.42□□□□□ -0.9
SEC13-209ENST00000397117 IGHV3-73A0A0B4J1V6 119 aa9.41□□□□□ -0.9
SEC13-209ENST00000397117 TRAV26-2A0A0B4J265 109 aa9.41□□□□□ -0.9
SEC13-209ENST00000397117 SMKR1H3BMG3 65 aa9.41□□□□□ -0.9
SEC13-209ENST00000397117 NCR2O95944 276 aa9.41□□□□□ -0.9
SEC13-209ENST00000397117 DEFB130BP0DP73 79 aa9.41□□□□□ -0.9
SEC13-209ENST00000397117 DEFB130AP0DP74 79 aa9.41□□□□□ -0.9
SEC13-209ENST00000397117 Q0VG73 95 aa9.41□□□□□ -0.9
SEC13-209ENST00000397117 PDZD11Q5EBL8 140 aa9.41□□□□□ -0.9
SEC13-209ENST00000397117 FAM222AQ5U5X8 452 aa9.41□□□□□ -0.9
SEC13-209ENST00000397117 PRELID3AQ96N28 172 aa9.41□□□□□ -0.9
SEC13-209ENST00000397117 TRAV4A0A0B4J268 109 aa9.4□□□□□ -0.9
SEC13-209ENST00000397117 LINC00315P59091 139 aa9.4□□□□□ -0.9
SEC13-209ENST00000397117 ZFP2Q6ZN57 461 aa9.4□□□□□ -0.9
SEC13-209ENST00000397117 POM121L12Q8N7R1 296 aa9.4□□□□□ -0.9
SEC13-209ENST00000397117 NUPR2A6NF83 97 aa9.39□□□□□ -0.91
SEC13-209ENST00000397117 IGHV3-53P01767 116 aa9.39□□□□□ -0.91
SEC13-209ENST00000397117 SPART-AS1P0CW21 52 aa9.39□□□□□ -0.91
SEC13-209ENST00000397117 JOSD1Q15040 202 aaPredicted RBP9.39□□□□□ -0.91
SEC13-209ENST00000397117 OR10J3Q5JRS4 329 aa9.39□□□□□ -0.91
SEC13-209ENST00000397117 SUMO4Q6EEV6 95 aa9.39□□□□□ -0.91
SEC13-209ENST00000397117 CDPF1Q6NVV7 123 aa9.39□□□□□ -0.91
SEC13-209ENST00000397117 CEMP1Q6PRD7 247 aaPredicted RBP9.39□□□□□ -0.91
SEC13-209ENST00000397117 DKK2Q9UBU2 259 aa9.39□□□□□ -0.91
SEC13-209ENST00000397117 LAMTOR2Q9Y2Q5 125 aa9.39□□□□□ -0.91
SEC13-209ENST00000397117 TEX48A0A1B0GUV7 120 aa9.38□□□□□ -0.91
SEC13-209ENST00000397117 PPP1R17O96001 155 aa9.38□□□□□ -0.91
SEC13-209ENST00000397117 UFSP1Q6NVU6 142 aa9.38□□□□□ -0.91
SEC13-209ENST00000397117 BAGE3Q86Y29 109 aa9.38□□□□□ -0.91
SEC13-209ENST00000397117 ZNF479Q96JC4 524 aa9.38□□□□□ -0.91
SEC13-209ENST00000397117 HECTD4Q9Y4D8 3996 aa9.38□□□□□ -0.91
SEC13-209ENST00000397117 H7C1H1 209 aa9.38□□□□□ -0.91
SEC13-209ENST00000397117 CIDEAO60543 219 aa9.38□□□□□ -0.91
SEC13-209ENST00000397117 GATA1P15976 413 aaPredicted RBP9.38□□□□□ -0.91
SEC13-209ENST00000397117 LINC00310P59036 64 aa9.38□□□□□ -0.91
SEC13-209ENST00000397117 DAD1P61803 113 aa9.38□□□□□ -0.91
SEC13-209ENST00000397117 LINC00612Q8N6U2 182 aa9.38□□□□□ -0.91
SEC13-209ENST00000397117 C18orf32Q8TCD1 76 aa9.38□□□□□ -0.91
SEC13-209ENST00000397117 C11orf68Q9H3H3 251 aaKnown RBP9.38□□□□□ -0.91
SEC13-209ENST00000397117 A0A0J9YWU9 116 aa9.37□□□□□ -0.91
SEC13-209ENST00000397117 GAS8-AS1O95177 125 aa9.37□□□□□ -0.91
SEC13-209ENST00000397117 TNFRSF6BO95407 300 aa9.37□□□□□ -0.91
SEC13-209ENST00000397117 ESDP10768 282 aa9.37□□□□□ -0.91
SEC13-209ENST00000397117 TMEM18Q96B42 140 aa9.37□□□□□ -0.91
SEC13-209ENST00000397117 C18orf15Q96N68 181 aa9.37□□□□□ -0.91
SEC13-209ENST00000397117 PCLOQ9Y6V0 5065 aa9.37□□□□□ -0.91
SEC13-209ENST00000397117 TRGV4A0A0C4DH28 118 aa9.36□□□□□ -0.91
SEC13-209ENST00000397117 NPYP01303 97 aa9.36□□□□□ -0.91
SEC13-209ENST00000397117 IQCJQ1A5X6 159 aa9.36□□□□□ -0.91
SEC13-209ENST00000397117 MAP1LC3AQ9H492 121 aa9.36□□□□□ -0.91
SEC13-209ENST00000397117 CELA1Q9UNI1 258 aa9.36□□□□□ -0.91
SEC13-209ENST00000397117 LOC389332A0A1B0GUA5 103 aa9.35□□□□□ -0.91
SEC13-209ENST00000397117 M0QY20 66 aa9.35□□□□□ -0.91
SEC13-209ENST00000397117 NUPR1O60356 82 aa9.35□□□□□ -0.91
SEC13-209ENST00000397117 NRACQ8N912 160 aa9.35□□□□□ -0.91
SEC13-209ENST00000397117 RPL39LQ96EH5 51 aaKnown RBP9.35□□□□□ -0.91
SEC13-209ENST00000397117 KLK5Q9Y337 293 aaPredicted RBP9.35□□□□□ -0.91
SEC13-209ENST00000397117 SERF1AO75920 110 aa9.34□□□□□ -0.91
SEC13-209ENST00000397117 Q6ZSN1 163 aa9.34□□□□□ -0.91
SEC13-209ENST00000397117 PRSS3P2Q8NHM4 247 aa9.34□□□□□ -0.91
SEC13-209ENST00000397117 VPS13DQ5THJ4 4388 aa9.34□□□□□ -0.91
SEC13-209ENST00000397117 C20orf78Q9BR46 151 aa9.34□□□□□ -0.91
SEC13-209ENST00000397117 ST20Q9HBF5 79 aa9.34□□□□□ -0.91
SEC13-209ENST00000397117 DNAH6Q9C0G6 4158 aa9.34□□□□□ -0.92
SEC13-209ENST00000397117 PKIAP61925 76 aa9.33□□□□□ -0.92
SEC13-209ENST00000397117 SUMO2P61956 95 aaKnown RBP9.33□□□□□ -0.92
SEC13-209ENST00000397117 LGALS9CQ6DKI2 356 aa9.33□□□□□ -0.92
SEC13-209ENST00000397117 RNASEKQ6P5S7 137 aaKnown RBP9.33□□□□□ -0.92
SEC13-209ENST00000397117 K7EQD1 137 aa9.32□□□□□ -0.92
SEC13-209ENST00000397117 ATP5G1P05496 136 aa9.32□□□□□ -0.92
SEC13-209ENST00000397117 PMCHP20382 165 aa9.32□□□□□ -0.92
SEC13-209ENST00000397117 IFI27P40305 119 aaPredicted RBP9.32□□□□□ -0.92
SEC13-209ENST00000397117 FHL2Q14192 279 aa9.32□□□□□ -0.92
SEC13-209ENST00000397117 FA2HQ7L5A8 372 aa9.32□□□□□ -0.92
SEC13-209ENST00000397117 NIT1Q86X76 327 aa9.32□□□□□ -0.92
SEC13-209ENST00000397117 TNFRSF18Q9Y5U5 241 aa9.32□□□□□ -0.92
SEC13-209ENST00000397117 NACAE9PAV3 2078 aa9.32□□□□□ -0.92
SEC13-209ENST00000397117 KIAA1109Q2LD37 5005 aa9.32□□□□□ -0.92
SEC13-209ENST00000397117 TRBV6-5A0A0K0K1A5 114 aa9.31□□□□□ -0.92
SEC13-209ENST00000397117 TRBV6-4A0A1B0GX49 114 aa9.31□□□□□ -0.92
SEC13-209ENST00000397117 P0DMU3 169 aa9.31□□□□□ -0.92
SEC13-209ENST00000397117 FAM231AP0DMU4 169 aa9.31□□□□□ -0.92
SEC13-209ENST00000397117 FAM231CP0DMU5 169 aa9.31□□□□□ -0.92
SEC13-209ENST00000397117 SLC25A29Q8N8R3 303 aa9.31□□□□□ -0.92
SEC13-209ENST00000397117 DNAJC30Q96LL9 226 aa9.31□□□□□ -0.92
SEC13-209ENST00000397117 NXT2Q9NPJ8 142 aaKnown RBP9.31□□□□□ -0.92
SEC13-209ENST00000397117 HHLA3Q9XRX5 114 aa9.31□□□□□ -0.92
SEC13-209ENST00000397117 TRBV10-1A0A0K0K1A3 114 aa9.31□□□□□ -0.92
SEC13-209ENST00000397117 LINC00614P0C842 121 aa9.31□□□□□ -0.92
SEC13-209ENST00000397117 RHOHQ15669 191 aa9.31□□□□□ -0.92
SEC13-209ENST00000397117 C12orf74Q32Q52 190 aa9.31□□□□□ -0.92
SEC13-209ENST00000397117 C11orf45Q8TAV5 145 aa9.31□□□□□ -0.92
SEC13-209ENST00000397117 PHLDA1Q8WV24 401 aaPredicted RBP9.31□□□□□ -0.92
SEC13-209ENST00000397117 CHCHD1Q96BP2 118 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms