RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 Q8N1Y9 231 aa7.39□□□□□ -1.23
TRIM39-203ENST00000396547 YAE1D1Q9NRH1 226 aa7.39□□□□□ -1.23
TRIM39-203ENST00000396547 TRAV12-2A0A075B6T6 113 aa7.38□□□□□ -1.23
TRIM39-203ENST00000396547 RPL32P62910 135 aaKnown RBP7.38□□□□□ -1.23
TRIM39-203ENST00000396547 Q6ZSV7 163 aa7.38□□□□□ -1.23
TRIM39-203ENST00000396547 CSPG4Q6UVK1 2322 aa7.38□□□□□ -1.23
TRIM39-203ENST00000396547 A0A0J9YXV3 536 aa7.38□□□□□ -1.23
TRIM39-203ENST00000396547 VCYO14598 125 aa7.38□□□□□ -1.23
TRIM39-203ENST00000396547 C9orf139Q6ZV77 190 aa7.38□□□□□ -1.23
TRIM39-203ENST00000396547 IGHV3-73A0A0B4J1V6 119 aa7.38□□□□□ -1.23
TRIM39-203ENST00000396547 IGIPA6NJ69 53 aa7.38□□□□□ -1.23
TRIM39-203ENST00000396547 IGHV3-33P01772 117 aa7.38□□□□□ -1.23
TRIM39-203ENST00000396547 C15orf53Q8NAA6 179 aa7.38□□□□□ -1.23
TRIM39-203ENST00000396547 HRNRQ86YZ3 2850 aaPredicted RBP7.37□□□□□ -1.23
TRIM39-203ENST00000396547 TRAV8-4A0A0B4J246 113 aa7.37□□□□□ -1.23
TRIM39-203ENST00000396547 EDN2P20800 178 aa7.37□□□□□ -1.23
TRIM39-203ENST00000396547 GCN1Q92616 2671 aaKnown RBP7.37□□□□□ -1.23
TRIM39-203ENST00000396547 EIF4EBP3O60516 100 aaPredicted RBP7.37□□□□□ -1.23
TRIM39-203ENST00000396547 NHLRC4P0CG21 123 aaPredicted RBP7.37□□□□□ -1.23
TRIM39-203ENST00000396547 NDUFV3P56181 108 aaKnown RBP7.37□□□□□ -1.23
TRIM39-203ENST00000396547 PAPPA-AS1Q5QFB9 102 aa7.37□□□□□ -1.23
TRIM39-203ENST00000396547 BRD3OSQ6XYD6 125 aa7.37□□□□□ -1.23
TRIM39-203ENST00000396547 TRBV7-1A0A0A6YYK4 115 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 C2CD3Q4AC94 2353 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 TRAV41A0A0B4J266 112 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 A0A0U1RRA0 63 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 A8MZ25 164 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 LINC01620Q4KN68 170 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 CEMP1Q6PRD7 247 aaPredicted RBP7.36□□□□□ -1.23
TRIM39-203ENST00000396547 DUX3Q96PT4 197 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 VCX2Q9H322 139 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 GAGE12JA6NER3 117 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 OVOL1O14753 267 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 GAGE7O76087 117 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 GAGE12FP0CL80 117 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 GAGE12GP0CL81 117 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 GAGE12IP0CL82 117 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 GAGE4Q13068 117 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 MINOS1Q5TGZ0 78 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 C2orf82Q6UX34 121 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 KLK9Q9UKQ9 250 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 MINOS1-NBL1R4GNA1 71 aa7.36□□□□□ -1.23
TRIM39-203ENST00000396547 TRAV8-3A0A0A6YYJ7 113 aa7.35□□□□□ -1.23
TRIM39-203ENST00000396547 PPP1R17O96001 155 aa7.35□□□□□ -1.23
TRIM39-203ENST00000396547 IFITM1P13164 125 aa7.35□□□□□ -1.23
TRIM39-203ENST00000396547 MRPL53Q96EL3 112 aaKnown RBP7.35□□□□□ -1.23
TRIM39-203ENST00000396547 MDFICQ9P1T7 246 aa7.35□□□□□ -1.23
TRIM39-203ENST00000396547 CENPEQ02224 2701 aa7.35□□□□□ -1.23
TRIM39-203ENST00000396547 DOPEY1Q5JWR5 2465 aa7.35□□□□□ -1.23
TRIM39-203ENST00000396547 USP9XQ93008 2570 aaPredicted RBP7.35□□□□□ -1.23
TRIM39-203ENST00000396547 EBI3Q14213 229 aa7.35□□□□□ -1.23
TRIM39-203ENST00000396547 CLEC2BQ92478 149 aa7.35□□□□□ -1.23
TRIM39-203ENST00000396547 RHPN1-AS1Q9BWJ2 59 aa7.35□□□□□ -1.23
TRIM39-203ENST00000396547 POLR2KP53803 58 aaKnown RBP7.34□□□□□ -1.23
TRIM39-203ENST00000396547 ATXN8Q156A1 80 aa7.34□□□□□ -1.23
TRIM39-203ENST00000396547 DAND5Q8N907 189 aa7.34□□□□□ -1.23
TRIM39-203ENST00000396547 TMEM263Q8WUH6 116 aaKnown RBP7.34□□□□□ -1.23
TRIM39-203ENST00000396547 CUBNO60494 3623 aa7.34□□□□□ -1.23
TRIM39-203ENST00000396547 VPS13CQ709C8 3753 aa7.34□□□□□ -1.23
TRIM39-203ENST00000396547 HELZ2Q9BYK8 2649 aaKnown RBP7.34□□□□□ -1.23
TRIM39-203ENST00000396547 CENPVL3A0A0U1RRI6 287 aa7.34□□□□□ -1.23
TRIM39-203ENST00000396547 M0QXV9 152 aa7.34□□□□□ -1.23
TRIM39-203ENST00000396547 RHODO00212 210 aa7.34□□□□□ -1.23
TRIM39-203ENST00000396547 LINC00315P59091 139 aa7.34□□□□□ -1.23
TRIM39-203ENST00000396547 ZNF876PQ49A33 203 aa7.34□□□□□ -1.23
TRIM39-203ENST00000396547 TMEM141Q96I45 108 aa7.34□□□□□ -1.23
TRIM39-203ENST00000396547 PRRC2AP48634 2157 aaKnown RBP7.34□□□□□ -1.23
TRIM39-203ENST00000396547 TRIAP1O43715 76 aa7.34□□□□□ -1.23
TRIM39-203ENST00000396547 U3KQE9 123 aa7.34□□□□□ -1.23
TRIM39-203ENST00000396547 IGHV1-69DA0A0B4J2H0 117 aa7.33□□□□□ -1.24
TRIM39-203ENST00000396547 SBSPONQ8IVN8 264 aa7.33□□□□□ -1.24
TRIM39-203ENST00000396547 AMELXQ99217 191 aa7.33□□□□□ -1.24
TRIM39-203ENST00000396547 OOSP1A8MZH6 123 aa7.33□□□□□ -1.24
TRIM39-203ENST00000396547 H3BMM0 161 aa7.33□□□□□ -1.24
TRIM39-203ENST00000396547 P0DMU3 169 aa7.33□□□□□ -1.24
TRIM39-203ENST00000396547 FAM231AP0DMU4 169 aa7.33□□□□□ -1.24
TRIM39-203ENST00000396547 FAM231CP0DMU5 169 aa7.33□□□□□ -1.24
TRIM39-203ENST00000396547 UBE2E1P51965 193 aa7.33□□□□□ -1.24
TRIM39-203ENST00000396547 UBE2WQ96B02 151 aa7.33□□□□□ -1.24
TRIM39-203ENST00000396547 KIF25-AS1Q9Y6Z4 181 aa7.33□□□□□ -1.24
TRIM39-203ENST00000396547 SIRPDQ9H106 197 aa7.32□□□□□ -1.24
TRIM39-203ENST00000396547 LENEPQ9Y5L5 61 aa7.32□□□□□ -1.24
TRIM39-203ENST00000396547 KNCNA6PVL3 124 aa7.32□□□□□ -1.24
TRIM39-203ENST00000396547 LEPROTO15243 131 aa7.32□□□□□ -1.24
TRIM39-203ENST00000396547 ZNF22P17026 224 aaPredicted RBP7.32□□□□□ -1.24
TRIM39-203ENST00000396547 CHCHD5Q9BSY4 110 aa7.32□□□□□ -1.24
TRIM39-203ENST00000396547 A0A0J9YXY3 114 aa7.32□□□□□ -1.24
TRIM39-203ENST00000396547 TMEM223A0PJW6 202 aa7.32□□□□□ -1.24
TRIM39-203ENST00000396547 NPFFO15130 113 aa7.32□□□□□ -1.24
TRIM39-203ENST00000396547 PRM2P04554 102 aa7.32□□□□□ -1.24
TRIM39-203ENST00000396547 C5orf56Q8N8D9 126 aa7.32□□□□□ -1.24
TRIM39-203ENST00000396547 TIMM17AQ99595 171 aa7.32□□□□□ -1.24
TRIM39-203ENST00000396547 SPINK13Q1W4C9 94 aa7.31□□□□□ -1.24
TRIM39-203ENST00000396547 MEIG1Q5JSS6 88 aa7.31□□□□□ -1.24
TRIM39-203ENST00000396547 ZNF625Q96I27 306 aaPredicted RBP7.31□□□□□ -1.24
TRIM39-203ENST00000396547 ODF3Q96PU9 254 aa7.31□□□□□ -1.24
TRIM39-203ENST00000396547 BPESC1Q9GZL8 116 aa7.31□□□□□ -1.24
TRIM39-203ENST00000396547 BAHCC1Q9P281 2608 aa7.31□□□□□ -1.24
TRIM39-203ENST00000396547 C19orf84I3L1E1 186 aa7.31□□□□□ -1.24
TRIM39-203ENST00000396547 CD28P10747 220 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms