RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 TMEM218A2RU14 115 aa13.55□□□□□ -0.24
SNCA-203ENST00000394986 C1orf134Q5TEV5 83 aa13.55□□□□□ -0.24
SNCA-203ENST00000394986 FRAS1Q86XX4 4008 aa13.54□□□□□ -0.24
SNCA-203ENST00000394986 LINC00862A6NCI5 91 aa13.54□□□□□ -0.24
SNCA-203ENST00000394986 PNRC1Q12796 327 aaPredicted RBP13.54□□□□□ -0.24
SNCA-203ENST00000394986 SMIM15Q7Z3B0 74 aa13.54□□□□□ -0.24
SNCA-203ENST00000394986 H7C1H1 209 aa13.53□□□□□ -0.24
SNCA-203ENST00000394986 DNAH10OSP0CZ25 163 aa13.53□□□□□ -0.24
SNCA-203ENST00000394986 RASL11AQ6T310 242 aa13.53□□□□□ -0.24
SNCA-203ENST00000394986 Q8N3U1 123 aa13.53□□□□□ -0.24
SNCA-203ENST00000394986 GATD1Q8NB37 220 aa13.53□□□□□ -0.24
SNCA-203ENST00000394986 FAT2Q9NYQ8 4349 aa13.52□□□□□ -0.25
SNCA-203ENST00000394986 F8W036 122 aa13.52□□□□□ -0.25
SNCA-203ENST00000394986 C6orf223Q8N319 242 aa13.52□□□□□ -0.25
SNCA-203ENST00000394986 EPPK1P58107 5090 aaKnown RBP13.52□□□□□ -0.25
SNCA-203ENST00000394986 DNAH17Q9UFH2 4485 aa13.51□□□□□ -0.25
SNCA-203ENST00000394986 RIGQ13278 110 aa13.51□□□□□ -0.25
SNCA-203ENST00000394986 TNFRSF18Q9Y5U5 241 aa13.51□□□□□ -0.25
SNCA-203ENST00000394986 IGHV3-30P01768 117 aa13.5□□□□□ -0.25
SNCA-203ENST00000394986 IGHV3-33P01772 117 aa13.5□□□□□ -0.25
SNCA-203ENST00000394986 IGHV3-30-3P0DP02 117 aa13.5□□□□□ -0.25
SNCA-203ENST00000394986 IGHV3-30-5P0DP03 117 aa13.5□□□□□ -0.25
SNCA-203ENST00000394986 TMEM191AQ9H0A3 160 aa13.5□□□□□ -0.25
SNCA-203ENST00000394986 A0A087WWC5 75 aa13.49□□□□□ -0.25
SNCA-203ENST00000394986 LINC01556Q5JQF7 62 aa13.49□□□□□ -0.25
SNCA-203ENST00000394986 RPL39LQ96EH5 51 aaKnown RBP13.49□□□□□ -0.25
SNCA-203ENST00000394986 DNAJC30Q96LL9 226 aa13.49□□□□□ -0.25
SNCA-203ENST00000394986 PPP1R2P9O14990 202 aa13.48□□□□□ -0.25
SNCA-203ENST00000394986 GAS8-AS1O95177 125 aa13.48□□□□□ -0.25
SNCA-203ENST00000394986 MRPL54Q6P161 138 aaKnown RBP13.48□□□□□ -0.25
SNCA-203ENST00000394986 AMN1Q8IY45 258 aa13.48□□□□□ -0.25
SNCA-203ENST00000394986 DEFB104AQ8WTQ1 72 aa13.48□□□□□ -0.25
SNCA-203ENST00000394986 RNF185Q96GF1 192 aa13.48□□□□□ -0.25
SNCA-203ENST00000394986 NIT2Q9NQR4 276 aa13.48□□□□□ -0.25
SNCA-203ENST00000394986 MT-ND4LP03901 98 aa13.47□□□□□ -0.25
SNCA-203ENST00000394986 CAMPP49913 170 aa13.47□□□□□ -0.25
SNCA-203ENST00000394986 SEC11CQ9BY50 192 aa13.47□□□□□ -0.25
SNCA-203ENST00000394986 TRAV9-2A0A087WT02 112 aa13.47□□□□□ -0.25
SNCA-203ENST00000394986 TRBV6-8A0A0A6YYG3 113 aa13.47□□□□□ -0.25
SNCA-203ENST00000394986 PRSS29PA6NIE9 313 aa13.47□□□□□ -0.25
SNCA-203ENST00000394986 NTM-AS1Q6ZSK4 140 aa13.47□□□□□ -0.25
SNCA-203ENST00000394986 LINC00336Q6ZUF6 198 aa13.47□□□□□ -0.25
SNCA-203ENST00000394986 DAZ4Q86SG3 579 aaKnown RBP13.47□□□□□ -0.25
SNCA-203ENST00000394986 DAZ3Q9NR90 486 aaKnown RBP13.47□□□□□ -0.25
SNCA-203ENST00000394986 RAB4AP20338 218 aa13.46□□□□□ -0.26
SNCA-203ENST00000394986 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.46□□□□□ -0.26
SNCA-203ENST00000394986 ANAPC16Q96DE5 110 aa13.46□□□□□ -0.26
SNCA-203ENST00000394986 SMKR1H3BMG3 65 aa13.44□□□□□ -0.26
SNCA-203ENST00000394986 NCR2O95944 276 aa13.44□□□□□ -0.26
SNCA-203ENST00000394986 NIT1Q86X76 327 aa13.44□□□□□ -0.26
SNCA-203ENST00000394986 A0A1B0GXF2 115 aa13.43□□□□□ -0.26
SNCA-203ENST00000394986 TNP2Q05952 138 aa13.43□□□□□ -0.26
SNCA-203ENST00000394986 C10orf126Q8N4M7 172 aa13.43□□□□□ -0.26
SNCA-203ENST00000394986 RPS10P46783 165 aaKnown RBP13.42□□□□□ -0.26
SNCA-203ENST00000394986 HBBP68871 147 aa13.42□□□□□ -0.26
SNCA-203ENST00000394986 Q6ZRN7 208 aaPredicted RBP13.42□□□□□ -0.26
SNCA-203ENST00000394986 FRZBQ92765 325 aa13.42□□□□□ -0.26
SNCA-203ENST00000394986 HECTD4Q9Y4D8 3996 aa13.42□□□□□ -0.26
SNCA-203ENST00000394986 A0A1B0GW15 77 aa13.41□□□□□ -0.26
SNCA-203ENST00000394986 K7EP13 123 aa13.41□□□□□ -0.26
SNCA-203ENST00000394986 C10orf91Q5T1B1 145 aa13.41□□□□□ -0.26
SNCA-203ENST00000394986 FAM104BQ5XKR9 115 aa13.41□□□□□ -0.26
SNCA-203ENST00000394986 CHCHD5Q9BSY4 110 aa13.41□□□□□ -0.26
SNCA-203ENST00000394986 TRBV25-1A0A075B6N4 114 aa13.4□□□□□ -0.26
SNCA-203ENST00000394986 IBA57-AS1B1ANH7 110 aa13.4□□□□□ -0.26
SNCA-203ENST00000394986 TMEM262E9PQX1 116 aa13.4□□□□□ -0.26
SNCA-203ENST00000394986 MRPL51Q4U2R6 128 aaKnown RBP13.4□□□□□ -0.26
SNCA-203ENST00000394986 TMEM97Q5BJF2 176 aa13.4□□□□□ -0.26
SNCA-203ENST00000394986 MRAP2Q96G30 205 aa13.4□□□□□ -0.26
SNCA-203ENST00000394986 Q9HAA7 133 aa13.4□□□□□ -0.26
SNCA-203ENST00000394986 CARHSP1Q9Y2V2 147 aaKnown RBP13.4□□□□□ -0.26
SNCA-203ENST00000394986 URGCP-MRPS24S4R325 110 aa13.4□□□□□ -0.26
SNCA-203ENST00000394986 A0A087WX48 190 aa13.39□□□□□ -0.27
SNCA-203ENST00000394986 A0A1B0GVY2 172 aa13.39□□□□□ -0.27
SNCA-203ENST00000394986 SDHAF1A6NFY7 115 aa13.39□□□□□ -0.27
SNCA-203ENST00000394986 BTF3P20290 206 aaKnown RBP13.39□□□□□ -0.27
SNCA-203ENST00000394986 IGHV1-24A0A0C4DH33 117 aa13.39□□□□□ -0.27
SNCA-203ENST00000394986 GAGE6Q13070 117 aa13.39□□□□□ -0.27
SNCA-203ENST00000394986 IQCJQ1A5X6 159 aa13.39□□□□□ -0.27
SNCA-203ENST00000394986 MPV17L2Q567V2 206 aa13.39□□□□□ -0.27
SNCA-203ENST00000394986 KCNIP4Q6PIL6 250 aa13.39□□□□□ -0.27
SNCA-203ENST00000394986 ATP5L2Q7Z4Y8 100 aa13.39□□□□□ -0.27
SNCA-203ENST00000394986 TRBV6-5A0A0K0K1A5 114 aa13.38□□□□□ -0.27
SNCA-203ENST00000394986 S100A8P05109 93 aa13.38□□□□□ -0.27
SNCA-203ENST00000394986 COTL1Q14019 142 aa13.38□□□□□ -0.27
SNCA-203ENST00000394986 PKD1P98161 4303 aa13.37□□□□□ -0.27
SNCA-203ENST00000394986 NFE4Q86UQ8 179 aa13.37□□□□□ -0.27
SNCA-203ENST00000394986 NRACQ8N912 160 aa13.37□□□□□ -0.27
SNCA-203ENST00000394986 Q8N976 141 aa13.37□□□□□ -0.27
SNCA-203ENST00000394986 CTDSP1Q9GZU7 261 aa13.37□□□□□ -0.27
SNCA-203ENST00000394986 ST20Q9HBF5 79 aa13.37□□□□□ -0.27
SNCA-203ENST00000394986 KLK12Q9UKR0 248 aa13.37□□□□□ -0.27
SNCA-203ENST00000394986 AMTP48728 403 aa13.36□□□□□ -0.27
SNCA-203ENST00000394986 TMEM243Q9BU79 118 aa13.36□□□□□ -0.27
SNCA-203ENST00000394986 TMEM70Q9BUB7 260 aa13.36□□□□□ -0.27
SNCA-203ENST00000394986 C7orf77A4D0Y5 90 aa13.35□□□□□ -0.27
SNCA-203ENST00000394986 ATRAIDQ6UW56 229 aa13.35□□□□□ -0.27
SNCA-203ENST00000394986 CLRN3Q8NCR9 226 aa13.35□□□□□ -0.27
SNCA-203ENST00000394986 CHCHD7Q9BUK0 85 aa13.35□□□□□ -0.27
SNCA-203ENST00000394986 DNAH11Q96DT5 4516 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms