RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 FXYD2P54710 66 aa11.28□□□□□ -0.6
UBE2D3-207ENST00000394801 ZNF876PQ49A33 203 aa11.28□□□□□ -0.6
UBE2D3-207ENST00000394801 FAM74A4Q5TZK3 123 aa11.28□□□□□ -0.6
UBE2D3-207ENST00000394801 KLHL30-AS1Q8NEE0 82 aa11.28□□□□□ -0.6
UBE2D3-207ENST00000394801 DUX3Q96PT4 197 aa11.28□□□□□ -0.6
UBE2D3-207ENST00000394801 UNC79Q9P2D8 2635 aa11.28□□□□□ -0.6
UBE2D3-207ENST00000394801 DEFB114Q30KQ6 69 aa11.27□□□□□ -0.6
UBE2D3-207ENST00000394801 CHAC1Q9BUX1 264 aa11.27□□□□□ -0.6
UBE2D3-207ENST00000394801 HECTD1Q9ULT8 2610 aa11.27□□□□□ -0.61
UBE2D3-207ENST00000394801 RBMY1BA6NDE4 496 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-207ENST00000394801 RBMY1EA6NEQ0 496 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-207ENST00000394801 DNAJC9-AS1A6NH13 148 aa11.27□□□□□ -0.61
UBE2D3-207ENST00000394801 TSHBP01222 138 aa11.27□□□□□ -0.61
UBE2D3-207ENST00000394801 RBMY1DP0C7P1 496 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-207ENST00000394801 MAPKAPK5-AS1Q8N8E1 139 aa11.27□□□□□ -0.61
UBE2D3-207ENST00000394801 SPAG8Q99932 426 aaPredicted RBP11.27□□□□□ -0.61
UBE2D3-207ENST00000394801 CIDEAO60543 219 aa11.26□□□□□ -0.61
UBE2D3-207ENST00000394801 KHDC1LQ5JSQ8 128 aa11.26□□□□□ -0.61
UBE2D3-207ENST00000394801 TRPT1Q86TN4 253 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-207ENST00000394801 PHLDA1Q8WV24 401 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-207ENST00000394801 TMEM141Q96I45 108 aa11.26□□□□□ -0.61
UBE2D3-207ENST00000394801 TIMM17AQ99595 171 aa11.26□□□□□ -0.61
UBE2D3-207ENST00000394801 TM2D2Q9BX73 214 aa11.26□□□□□ -0.61
UBE2D3-207ENST00000394801 TP53TG1Q9Y2A0 90 aa11.26□□□□□ -0.61
UBE2D3-207ENST00000394801 ZNF56Q15929 161 aa11.26□□□□□ -0.61
UBE2D3-207ENST00000394801 MAP6D1Q9H9H5 199 aa11.26□□□□□ -0.61
UBE2D3-207ENST00000394801 EDA2RQ9HAV5 297 aa11.26□□□□□ -0.61
UBE2D3-207ENST00000394801 FLNAP21333 2647 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-207ENST00000394801 RPL24P83731 157 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-207ENST00000394801 PIK3CD-AS1Q5SR53 167 aa11.25□□□□□ -0.61
UBE2D3-207ENST00000394801 DYNLRB2Q8TF09 96 aa11.25□□□□□ -0.61
UBE2D3-207ENST00000394801 PDZD2O15018 2839 aa11.24□□□□□ -0.61
UBE2D3-207ENST00000394801 TEX48A0A1B0GUV7 120 aa11.24□□□□□ -0.61
UBE2D3-207ENST00000394801 CEND1Q8N111 149 aa11.24□□□□□ -0.61
UBE2D3-207ENST00000394801 ESM1Q9NQ30 184 aa11.24□□□□□ -0.61
UBE2D3-207ENST00000394801 SONP18583 2426 aaKnown RBP11.24□□□□□ -0.61
UBE2D3-207ENST00000394801 E9PLD3 99 aa11.24□□□□□ -0.61
UBE2D3-207ENST00000394801 SCGB1A1P11684 91 aa11.24□□□□□ -0.61
UBE2D3-207ENST00000394801 FHL3Q13643 280 aa11.24□□□□□ -0.61
UBE2D3-207ENST00000394801 TAL2Q16559 108 aa11.24□□□□□ -0.61
UBE2D3-207ENST00000394801 NSUN5P1Q3KNT7 163 aa11.24□□□□□ -0.61
UBE2D3-207ENST00000394801 PTH2Q96A98 100 aa11.24□□□□□ -0.61
UBE2D3-207ENST00000394801 NF1P21359 2839 aa11.24□□□□□ -0.61
UBE2D3-207ENST00000394801 CCDC168Q8NDH2 2452 aa11.23□□□□□ -0.61
UBE2D3-207ENST00000394801 RPL39P62891 51 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-207ENST00000394801 PMVKQ15126 192 aa11.23□□□□□ -0.61
UBE2D3-207ENST00000394801 RHOHQ15669 191 aa11.23□□□□□ -0.61
UBE2D3-207ENST00000394801 CD300EQ496F6 205 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-207ENST00000394801 PAPPA-AS1Q5QFB9 102 aa11.23□□□□□ -0.61
UBE2D3-207ENST00000394801 CLUHP3Q96NS8 147 aa11.23□□□□□ -0.61
UBE2D3-207ENST00000394801 LINC00467Q9BRT7 94 aa11.23□□□□□ -0.61
UBE2D3-207ENST00000394801 TRAV25A0A0B4J276 109 aa11.23□□□□□ -0.61
UBE2D3-207ENST00000394801 OR11H12B2RN74 326 aa11.23□□□□□ -0.61
UBE2D3-207ENST00000394801 KRTAP1-1Q07627 177 aa11.23□□□□□ -0.61
UBE2D3-207ENST00000394801 OR11H2Q8NH07 326 aa11.23□□□□□ -0.61
UBE2D3-207ENST00000394801 RAX2Q96IS3 184 aa11.23□□□□□ -0.61
UBE2D3-207ENST00000394801 IGLV4-69A0A075B6H9 119 aa11.22□□□□□ -0.61
UBE2D3-207ENST00000394801 HIST2H2BCQ6DN03 193 aa11.22□□□□□ -0.61
UBE2D3-207ENST00000394801 F8W1H4 67 aa11.21□□□□□ -0.61
UBE2D3-207ENST00000394801 NHP2Q9NX24 153 aaKnown RBP11.21□□□□□ -0.61
UBE2D3-207ENST00000394801 MYMXA0A1B0GTQ4 84 aa11.21□□□□□ -0.62
UBE2D3-207ENST00000394801 K7ERJ3 54 aa11.21□□□□□ -0.62
UBE2D3-207ENST00000394801 M0R2P5 195 aa11.21□□□□□ -0.62
UBE2D3-207ENST00000394801 I3L3M4 83 aa11.2□□□□□ -0.62
UBE2D3-207ENST00000394801 P0DMU3 169 aa11.2□□□□□ -0.62
UBE2D3-207ENST00000394801 FAM231AP0DMU4 169 aa11.2□□□□□ -0.62
UBE2D3-207ENST00000394801 FAM231CP0DMU5 169 aa11.2□□□□□ -0.62
UBE2D3-207ENST00000394801 HIST2H2BDQ6DRA6 164 aa11.2□□□□□ -0.62
UBE2D3-207ENST00000394801 DEFB104AQ8WTQ1 72 aa11.2□□□□□ -0.62
UBE2D3-207ENST00000394801 A8MWV9 139 aa11.2□□□□□ -0.62
UBE2D3-207ENST00000394801 IGLL5B9A064 214 aa11.2□□□□□ -0.62
UBE2D3-207ENST00000394801 HTN1P15515 57 aa11.2□□□□□ -0.62
UBE2D3-207ENST00000394801 SIGMAR1Q99720 223 aa11.2□□□□□ -0.62
UBE2D3-207ENST00000394801 C11orf86A6NJI1 115 aa11.19□□□□□ -0.62
UBE2D3-207ENST00000394801 J3QR89 54 aa11.19□□□□□ -0.62
UBE2D3-207ENST00000394801 ZNF415Q09FC8 603 aa11.19□□□□□ -0.62
UBE2D3-207ENST00000394801 C20orf203Q8NBC4 194 aa11.19□□□□□ -0.62
UBE2D3-207ENST00000394801 PRADC1Q9BSG0 188 aa11.19□□□□□ -0.62
UBE2D3-207ENST00000394801 SPANXB1Q9NS25 103 aaPredicted RBP11.19□□□□□ -0.62
UBE2D3-207ENST00000394801 CCL24O00175 119 aa11.18□□□□□ -0.62
UBE2D3-207ENST00000394801 CD28P10747 220 aa11.18□□□□□ -0.62
UBE2D3-207ENST00000394801 AZU1P20160 251 aa11.18□□□□□ -0.62
UBE2D3-207ENST00000394801 ODF3L2Q3SX64 289 aa11.18□□□□□ -0.62
UBE2D3-207ENST00000394801 C11orf72Q8NBR9 251 aa11.18□□□□□ -0.62
UBE2D3-207ENST00000394801 ZNF479Q96JC4 524 aa11.18□□□□□ -0.62
UBE2D3-207ENST00000394801 C16orf95Q9H693 158 aa11.18□□□□□ -0.62
UBE2D3-207ENST00000394801 ANK3Q12955 4377 aaKnown RBP11.18□□□□□ -0.62
UBE2D3-207ENST00000394801 TRBV7-3A0A075B6L6 115 aa11.17□□□□□ -0.62
UBE2D3-207ENST00000394801 PRM2P04554 102 aa11.17□□□□□ -0.62
UBE2D3-207ENST00000394801 INSP01308 110 aa11.17□□□□□ -0.62
UBE2D3-207ENST00000394801 RNASE1P07998 156 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-207ENST00000394801 C12orf74Q32Q52 190 aa11.17□□□□□ -0.62
UBE2D3-207ENST00000394801 LINC01587Q99440 93 aa11.17□□□□□ -0.62
UBE2D3-207ENST00000394801 SPXQ9BT56 116 aa11.17□□□□□ -0.62
UBE2D3-207ENST00000394801 ITPR2Q14571 2701 aa11.16□□□□□ -0.62
UBE2D3-207ENST00000394801 WFDC2Q14508 124 aa11.16□□□□□ -0.62
UBE2D3-207ENST00000394801 BEAN1Q3B7T3 259 aa11.16□□□□□ -0.62
UBE2D3-207ENST00000394801 LINC01006Q8NI28 216 aa11.16□□□□□ -0.62
UBE2D3-207ENST00000394801 GAGE12HA6NDE8 117 aa11.16□□□□□ -0.62
UBE2D3-207ENST00000394801 NFE4Q86UQ8 179 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms