RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 TMEM200BQ69YZ2 307 aa9.35□□□□□ -0.91
SLC28A1-203ENST00000394573 C9orf47Q6ZRZ4 202 aa9.35□□□□□ -0.91
SLC28A1-203ENST00000394573 TMEM61Q8N0U2 210 aa9.35□□□□□ -0.91
SLC28A1-203ENST00000394573 LINC00482Q8N8I6 264 aa9.35□□□□□ -0.91
SLC28A1-203ENST00000394573 TMEM190Q8WZ59 177 aa9.35□□□□□ -0.91
SLC28A1-203ENST00000394573 IGKV3-15P01624 115 aa9.35□□□□□ -0.91
SLC28A1-203ENST00000394573 IGHV3-30-3P0DP02 117 aa9.35□□□□□ -0.91
SLC28A1-203ENST00000394573 HOXD3P31249 432 aaPredicted RBP9.35□□□□□ -0.91
SLC28A1-203ENST00000394573 GPHB5Q86YW7 130 aa9.35□□□□□ -0.91
SLC28A1-203ENST00000394573 LINC00474Q9P2X8 69 aa9.34□□□□□ -0.91
SLC28A1-203ENST00000394573 PHLDA3Q9Y5J5 127 aa9.34□□□□□ -0.91
SLC28A1-203ENST00000394573 IGHV1-18A0A0C4DH31 117 aa9.34□□□□□ -0.91
SLC28A1-203ENST00000394573 DYNLRB1Q9NP97 96 aa9.34□□□□□ -0.91
SLC28A1-203ENST00000394573 C22orf24Q9Y442 160 aa9.34□□□□□ -0.91
SLC28A1-203ENST00000394573 ADGRG4Q8IZF6 3080 aa9.33□□□□□ -0.92
SLC28A1-203ENST00000394573 BUB1B-PAK6H3BSN5 160 aa9.33□□□□□ -0.92
SLC28A1-203ENST00000394573 CCL21O00585 134 aa9.33□□□□□ -0.92
SLC28A1-203ENST00000394573 RNASE13Q5GAN3 156 aaKnown RBP9.33□□□□□ -0.92
SLC28A1-203ENST00000394573 C9orf129Q5T035 196 aaKnown RBP9.33□□□□□ -0.92
SLC28A1-203ENST00000394573 FP248Q71RG6 208 aaPredicted RBP9.33□□□□□ -0.92
SLC28A1-203ENST00000394573 NUP37Q8NFH4 326 aa9.33□□□□□ -0.92
SLC28A1-203ENST00000394573 C16orf95Q9H693 158 aa9.33□□□□□ -0.92
SLC28A1-203ENST00000394573 TRAV23DV6A0A075B6W5 121 aa9.32□□□□□ -0.92
SLC28A1-203ENST00000394573 F5H697 171 aa9.32□□□□□ -0.92
SLC28A1-203ENST00000394573 DEFB1P60022 68 aa9.32□□□□□ -0.92
SLC28A1-203ENST00000394573 Q8N2B8 174 aa9.32□□□□□ -0.92
SLC28A1-203ENST00000394573 LINC00574Q9H8X3 128 aa9.32□□□□□ -0.92
SLC28A1-203ENST00000394573 C14orf132Q9NPU4 83 aa9.32□□□□□ -0.92
SLC28A1-203ENST00000394573 A0A087WWL8 130 aa9.32□□□□□ -0.92
SLC28A1-203ENST00000394573 A0A1W2PRX2 142 aa9.32□□□□□ -0.92
SLC28A1-203ENST00000394573 TMEM178BH3BS89 294 aa9.32□□□□□ -0.92
SLC28A1-203ENST00000394573 CD59P13987 128 aa9.32□□□□□ -0.92
SLC28A1-203ENST00000394573 SS18Q15532 418 aa9.32□□□□□ -0.92
SLC28A1-203ENST00000394573 LINC00846Q9NV44 126 aa9.32□□□□□ -0.92
SLC28A1-203ENST00000394573 SPRR3Q9UBC9 169 aa9.31□□□□□ -0.92
SLC28A1-203ENST00000394573 NDUFA12Q9UI09 145 aa9.31□□□□□ -0.92
SLC28A1-203ENST00000394573 IGHV4-4A0A075B6R2 117 aa9.31□□□□□ -0.92
SLC28A1-203ENST00000394573 SDHAF1A6NFY7 115 aa9.31□□□□□ -0.92
SLC28A1-203ENST00000394573 DNAL4O96015 105 aa9.31□□□□□ -0.92
SLC28A1-203ENST00000394573 CACNA1EQ15878 2313 aa9.31□□□□□ -0.92
SLC28A1-203ENST00000394573 GHRHP01286 108 aa9.3□□□□□ -0.92
SLC28A1-203ENST00000394573 TMEM141Q96I45 108 aa9.3□□□□□ -0.92
SLC28A1-203ENST00000394573 FAM218AQ96MZ4 157 aa9.3□□□□□ -0.92
SLC28A1-203ENST00000394573 TRAV12-2A0A075B6T6 113 aa9.3□□□□□ -0.92
SLC28A1-203ENST00000394573 IGHV1-69DA0A0B4J2H0 117 aa9.3□□□□□ -0.92
SLC28A1-203ENST00000394573 C5orf67F2Z3F1 127 aa9.3□□□□□ -0.92
SLC28A1-203ENST00000394573 GNRH2O43555 120 aa9.3□□□□□ -0.92
SLC28A1-203ENST00000394573 NBL1P41271 181 aa9.3□□□□□ -0.92
SLC28A1-203ENST00000394573 MIAQ16674 131 aa9.3□□□□□ -0.92
SLC28A1-203ENST00000394573 PRSS33Q8NF86 280 aa9.3□□□□□ -0.92
SLC28A1-203ENST00000394573 RNASE6Q93091 150 aaKnown RBP9.29□□□□□ -0.92
SLC28A1-203ENST00000394573 TIMM17AQ99595 171 aa9.29□□□□□ -0.92
SLC28A1-203ENST00000394573 DMXL1Q9Y485 3027 aa9.29□□□□□ -0.92
SLC28A1-203ENST00000394573 ZNF625Q96I27 306 aaPredicted RBP9.29□□□□□ -0.92
SLC28A1-203ENST00000394573 CLPSL1A2RUU4 121 aa9.29□□□□□ -0.92
SLC28A1-203ENST00000394573 M0R1B8 84 aa9.29□□□□□ -0.92
SLC28A1-203ENST00000394573 CNOT1A5YKK6 2376 aaKnown RBP9.28□□□□□ -0.92
SLC28A1-203ENST00000394573 F8W735 103 aaPredicted RBP9.28□□□□□ -0.92
SLC28A1-203ENST00000394573 FAM74A4Q5TZK3 123 aa9.28□□□□□ -0.92
SLC28A1-203ENST00000394573 PRIMA1Q86XR5 153 aa9.28□□□□□ -0.92
SLC28A1-203ENST00000394573 MUC4Q99102 2169 aa9.28□□□□□ -0.92
SLC28A1-203ENST00000394573 SPTBN1Q01082 2364 aaKnown RBP9.28□□□□□ -0.92
SLC28A1-203ENST00000394573 LY6G6EA0A0G2JKS1 128 aa9.28□□□□□ -0.92
SLC28A1-203ENST00000394573 COX7A2LO14548 114 aa9.28□□□□□ -0.92
SLC28A1-203ENST00000394573 LYPD2Q6UXB3 125 aa9.28□□□□□ -0.92
SLC28A1-203ENST00000394573 U3KQA8 63 aa9.28□□□□□ -0.92
SLC28A1-203ENST00000394573 MED13LQ71F56 2210 aa9.27□□□□□ -0.92
SLC28A1-203ENST00000394573 RBMY1BA6NDE4 496 aaKnown RBP9.27□□□□□ -0.93
SLC28A1-203ENST00000394573 RBMY1EA6NEQ0 496 aaKnown RBP9.27□□□□□ -0.93
SLC28A1-203ENST00000394573 RBMY1DP0C7P1 496 aaKnown RBP9.27□□□□□ -0.93
SLC28A1-203ENST00000394573 RBMY1A1P0DJD3 496 aaKnown RBP9.27□□□□□ -0.93
SLC28A1-203ENST00000394573 RBMY1CP0DJD4 496 aa9.27□□□□□ -0.93
SLC28A1-203ENST00000394573 RPL28P46779 137 aaKnown RBP9.27□□□□□ -0.93
SLC28A1-203ENST00000394573 RBMY1FQ15415 496 aaKnown RBP9.27□□□□□ -0.93
SLC28A1-203ENST00000394573 SERP1Q9Y6X1 66 aa9.27□□□□□ -0.93
SLC28A1-203ENST00000394573 APC2O95996 2303 aa9.26□□□□□ -0.93
SLC28A1-203ENST00000394573 COX7A1P24310 79 aa9.26□□□□□ -0.93
SLC28A1-203ENST00000394573 SUMO4Q6EEV6 95 aa9.26□□□□□ -0.93
SLC28A1-203ENST00000394573 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.26□□□□□ -0.93
SLC28A1-203ENST00000394573 SIRPDQ9H106 197 aa9.26□□□□□ -0.93
SLC28A1-203ENST00000394573 NDUFC2O95298 119 aa9.26□□□□□ -0.93
SLC28A1-203ENST00000394573 TRBV12-3P01733 135 aa9.26□□□□□ -0.93
SLC28A1-203ENST00000394573 IGHV1-46P01743 117 aa9.26□□□□□ -0.93
SLC28A1-203ENST00000394573 INAFM2P0DMQ5 153 aa9.26□□□□□ -0.93
SLC28A1-203ENST00000394573 XCL1P47992 114 aa9.26□□□□□ -0.93
SLC28A1-203ENST00000394573 XCL2Q9UBD3 114 aa9.26□□□□□ -0.93
SLC28A1-203ENST00000394573 A0A0J9YX75 114 aa9.25□□□□□ -0.93
SLC28A1-203ENST00000394573 BUB3O43684 328 aa9.25□□□□□ -0.93
SLC28A1-203ENST00000394573 POLR2KP53803 58 aaKnown RBP9.25□□□□□ -0.93
SLC28A1-203ENST00000394573 VMO1Q7Z5L0 202 aa9.25□□□□□ -0.93
SLC28A1-203ENST00000394573 IGHV1-3A0A0C4DH29 117 aa9.25□□□□□ -0.93
SLC28A1-203ENST00000394573 VCYO14598 125 aa9.25□□□□□ -0.93
SLC28A1-203ENST00000394573 BEAN1Q3B7T3 259 aa9.25□□□□□ -0.93
SLC28A1-203ENST00000394573 LYPD5Q6UWN5 251 aa9.25□□□□□ -0.93
SLC28A1-203ENST00000394573 SNURFQ9Y675 71 aa9.25□□□□□ -0.93
SLC28A1-203ENST00000394573 EPOPA6NHQ4 379 aa9.24□□□□□ -0.93
SLC28A1-203ENST00000394573 RPL11P62913 178 aaKnown RBP9.24□□□□□ -0.93
SLC28A1-203ENST00000394573 MPLKIPQ8TAP9 179 aa9.24□□□□□ -0.93
SLC28A1-203ENST00000394573 FANCD2OSQ96PS1 177 aa9.24□□□□□ -0.93
SLC28A1-203ENST00000394573 ZFAND3Q9H8U3 227 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 192.3 ms