RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 TRGV11A0A075B6L2 103 aa8.18□□□□□ -1.1
TCOF1-203ENST00000394269 RNASE1P07998 156 aaKnown RBP8.18□□□□□ -1.1
TCOF1-203ENST00000394269 ODF3L2Q3SX64 289 aa8.18□□□□□ -1.1
TCOF1-203ENST00000394269 C20orf78Q9BR46 151 aa8.18□□□□□ -1.1
TCOF1-203ENST00000394269 IGKV2D-26A0A0A0MRZ7 120 aa8.17□□□□□ -1.1
TCOF1-203ENST00000394269 DPM2O94777 84 aa8.17□□□□□ -1.1
TCOF1-203ENST00000394269 CRYGDP07320 174 aa8.17□□□□□ -1.1
TCOF1-203ENST00000394269 MED14OSP0DP75 135 aa8.17□□□□□ -1.1
TCOF1-203ENST00000394269 COX8AP10176 69 aa8.17□□□□□ -1.1
TCOF1-203ENST00000394269 SPAG8Q99932 426 aaPredicted RBP8.17□□□□□ -1.1
TCOF1-203ENST00000394269 TP53TG1Q9Y2A0 90 aa8.17□□□□□ -1.1
TCOF1-203ENST00000394269 RNF151Q2KHN1 245 aa8.17□□□□□ -1.1
TCOF1-203ENST00000394269 C9orf85Q96MD7 179 aa8.17□□□□□ -1.1
TCOF1-203ENST00000394269 Q9UF83 564 aa8.17□□□□□ -1.1
TCOF1-203ENST00000394269 IGHV3-53P01767 116 aa8.17□□□□□ -1.1
TCOF1-203ENST00000394269 AZU1P20160 251 aa8.16□□□□□ -1.1
TCOF1-203ENST00000394269 SCGB2A2Q13296 93 aa8.16□□□□□ -1.1
TCOF1-203ENST00000394269 ODF3Q96PU9 254 aa8.16□□□□□ -1.1
TCOF1-203ENST00000394269 OPRPNQ99935 248 aaPredicted RBP8.16□□□□□ -1.1
TCOF1-203ENST00000394269 ANK3Q12955 4377 aaKnown RBP8.16□□□□□ -1.1
TCOF1-203ENST00000394269 VCYO14598 125 aa8.16□□□□□ -1.1
TCOF1-203ENST00000394269 PF4P02776 101 aa8.16□□□□□ -1.1
TCOF1-203ENST00000394269 HILS1P60008 231 aa8.16□□□□□ -1.1
TCOF1-203ENST00000394269 RNASE8Q8TDE3 154 aaKnown RBP8.16□□□□□ -1.1
TCOF1-203ENST00000394269 CHTOPQ9Y3Y2 248 aaKnown RBP8.16□□□□□ -1.1
TCOF1-203ENST00000394269 PPP1R17O96001 155 aa8.15□□□□□ -1.1
TCOF1-203ENST00000394269 CYSLTR1Q9Y271 337 aa8.15□□□□□ -1.1
TCOF1-203ENST00000394269 IGHV3-38A0A0C4DH36 116 aa8.15□□□□□ -1.1
TCOF1-203ENST00000394269 K7EMI3 77 aa8.15□□□□□ -1.1
TCOF1-203ENST00000394269 INSP01308 110 aa8.15□□□□□ -1.1
TCOF1-203ENST00000394269 COTL1Q14019 142 aa8.15□□□□□ -1.1
TCOF1-203ENST00000394269 ZFP2Q6ZN57 461 aa8.15□□□□□ -1.1
TCOF1-203ENST00000394269 M0QY20 66 aa8.15□□□□□ -1.11
TCOF1-203ENST00000394269 PHLDA1Q8WV24 401 aaPredicted RBP8.15□□□□□ -1.11
TCOF1-203ENST00000394269 NAA38Q9BRA0 125 aaKnown RBP8.15□□□□□ -1.11
TCOF1-203ENST00000394269 HHLA3Q9XRX5 114 aa8.15□□□□□ -1.11
TCOF1-203ENST00000394269 TRGV1A0A0A0MS02 117 aa8.14□□□□□ -1.11
TCOF1-203ENST00000394269 PRSS29PA6NIE9 313 aa8.14□□□□□ -1.11
TCOF1-203ENST00000394269 JMJD8Q96S16 334 aa8.14□□□□□ -1.11
TCOF1-203ENST00000394269 TOMM6Q96B49 74 aa8.14□□□□□ -1.11
TCOF1-203ENST00000394269 A0A087WX48 190 aa8.13□□□□□ -1.11
TCOF1-203ENST00000394269 NXPH4O95158 308 aa8.13□□□□□ -1.11
TCOF1-203ENST00000394269 BVES-AS1Q5T3Y7 98 aa8.13□□□□□ -1.11
TCOF1-203ENST00000394269 C12orf54Q6X4T0 127 aa8.13□□□□□ -1.11
TCOF1-203ENST00000394269 RAB37Q96AX2 223 aa8.13□□□□□ -1.11
TCOF1-203ENST00000394269 BAALCQ8WXS3 180 aa8.13□□□□□ -1.11
TCOF1-203ENST00000394269 TNFRSF18Q9Y5U5 241 aa8.13□□□□□ -1.11
TCOF1-203ENST00000394269 H7C1H1 209 aa8.13□□□□□ -1.11
TCOF1-203ENST00000394269 POLR2KP53803 58 aaKnown RBP8.13□□□□□ -1.11
TCOF1-203ENST00000394269 RIPPLY3P57055 190 aa8.13□□□□□ -1.11
TCOF1-203ENST00000394269 ZNF415Q09FC8 603 aa8.13□□□□□ -1.11
TCOF1-203ENST00000394269 FHL3Q13643 280 aa8.13□□□□□ -1.11
TCOF1-203ENST00000394269 VAMP3Q15836 100 aa8.13□□□□□ -1.11
TCOF1-203ENST00000394269 RNASE13Q5GAN3 156 aaKnown RBP8.13□□□□□ -1.11
TCOF1-203ENST00000394269 Q6ZSN1 163 aa8.13□□□□□ -1.11
TCOF1-203ENST00000394269 C2orf91Q6ZV80 131 aa8.13□□□□□ -1.11
TCOF1-203ENST00000394269 COX11Q9Y6N1 276 aa8.13□□□□□ -1.11
TCOF1-203ENST00000394269 LINC01546A6NGU7 62 aa8.12□□□□□ -1.11
TCOF1-203ENST00000394269 M0R2P5 195 aa8.12□□□□□ -1.11
TCOF1-203ENST00000394269 GCSHP23434 173 aa8.12□□□□□ -1.11
TCOF1-203ENST00000394269 TMEM97Q5BJF2 176 aa8.12□□□□□ -1.11
TCOF1-203ENST00000394269 MORN3Q6PF18 240 aaPredicted RBP8.12□□□□□ -1.11
TCOF1-203ENST00000394269 CEMP1Q6PRD7 247 aaPredicted RBP8.12□□□□□ -1.11
TCOF1-203ENST00000394269 F8VRH5 84 aa8.12□□□□□ -1.11
TCOF1-203ENST00000394269 K7EP13 123 aa8.12□□□□□ -1.11
TCOF1-203ENST00000394269 TMEM170BQ5T4T1 132 aa8.12□□□□□ -1.11
TCOF1-203ENST00000394269 TRPT1Q86TN4 253 aaKnown RBP8.12□□□□□ -1.11
TCOF1-203ENST00000394269 FGF6P10767 208 aa8.11□□□□□ -1.11
TCOF1-203ENST00000394269 PTTG1IPP53801 180 aa8.11□□□□□ -1.11
TCOF1-203ENST00000394269 BOD1L2Q8IYS8 172 aa8.11□□□□□ -1.11
TCOF1-203ENST00000394269 IGHV3-64A0A075B6Q5 118 aa8.11□□□□□ -1.11
TCOF1-203ENST00000394269 MAPKAPK5-AS1Q8N8E1 139 aa8.1□□□□□ -1.11
TCOF1-203ENST00000394269 TAX1BP3O14907 124 aa8.1□□□□□ -1.11
TCOF1-203ENST00000394269 KRTAP10-3P60369 221 aa8.1□□□□□ -1.11
TCOF1-203ENST00000394269 ORAOV1Q8WV07 137 aa8.1□□□□□ -1.11
TCOF1-203ENST00000394269 NOP10Q9NPE3 64 aaKnown RBP8.1□□□□□ -1.11
TCOF1-203ENST00000394269 C1orf158Q8N1D5 194 aa8.1□□□□□ -1.11
TCOF1-203ENST00000394269 DEFB125Q8N687 156 aa8.1□□□□□ -1.11
TCOF1-203ENST00000394269 NEXN-AS1Q8NBZ9 246 aa8.1□□□□□ -1.11
TCOF1-203ENST00000394269 C16orf95Q9H693 158 aa8.1□□□□□ -1.11
TCOF1-203ENST00000394269 PLNP26678 52 aa8.09□□□□□ -1.11
TCOF1-203ENST00000394269 RBX1P62877 108 aa8.09□□□□□ -1.11
TCOF1-203ENST00000394269 TRRAPQ9Y4A5 3859 aa8.09□□□□□ -1.11
TCOF1-203ENST00000394269 I3L3M4 83 aa8.09□□□□□ -1.11
TCOF1-203ENST00000394269 CFAP126Q5VTH2 177 aa8.09□□□□□ -1.11
TCOF1-203ENST00000394269 Q6ZTI0 123 aa8.09□□□□□ -1.11
TCOF1-203ENST00000394269 OR4C5Q8NGB2 326 aa8.09□□□□□ -1.11
TCOF1-203ENST00000394269 TRAV2A0A0B4J234 112 aa8.09□□□□□ -1.12
TCOF1-203ENST00000394269 TRBV27A0A0K0K1C4 114 aa8.09□□□□□ -1.12
TCOF1-203ENST00000394269 A8MWV9 139 aa8.09□□□□□ -1.12
TCOF1-203ENST00000394269 TSHBP01222 138 aa8.09□□□□□ -1.12
TCOF1-203ENST00000394269 OR11H2Q8NH07 326 aa8.09□□□□□ -1.12
TCOF1-203ENST00000394269 ZMAT4Q9H898 229 aa8.09□□□□□ -1.12
TCOF1-203ENST00000394269 TRAV25A0A0B4J276 109 aa8.08□□□□□ -1.12
TCOF1-203ENST00000394269 UBE2V1Q13404 147 aa8.08□□□□□ -1.12
TCOF1-203ENST00000394269 TRBV25-1A0A075B6N4 114 aa8.08□□□□□ -1.12
TCOF1-203ENST00000394269 SCGB1D4Q6XE38 83 aa8.08□□□□□ -1.12
TCOF1-203ENST00000394269 TRGV2A0A075B6R0 118 aa8.07□□□□□ -1.12
TCOF1-203ENST00000394269 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.07□□□□□ -1.12
TCOF1-203ENST00000394269 IGKV2-29A2NJV5 120 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms