RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 OR10J3Q5JRS4 329 aa16.53■□□□□ 0.24
CNN3-202ENST00000394202 BAGE3Q86Y29 109 aa16.53■□□□□ 0.24
CNN3-202ENST00000394202 LYRM9A8MSI8 78 aa16.52■□□□□ 0.24
CNN3-202ENST00000394202 SERF1AO75920 110 aa16.52■□□□□ 0.24
CNN3-202ENST00000394202 SCGB1D1O95968 90 aa16.52■□□□□ 0.24
CNN3-202ENST00000394202 SUMO4Q6EEV6 95 aa16.52■□□□□ 0.24
CNN3-202ENST00000394202 TRAV4A0A0B4J268 109 aa16.51■□□□□ 0.23
CNN3-202ENST00000394202 ORMDL3Q8N138 153 aa16.51■□□□□ 0.23
CNN3-202ENST00000394202 PRELID3AQ96N28 172 aa16.51■□□□□ 0.23
CNN3-202ENST00000394202 B9D2Q9BPU9 175 aa16.51■□□□□ 0.23
CNN3-202ENST00000394202 Q9UF83 564 aa16.51■□□□□ 0.23
CNN3-202ENST00000394202 A0A0J9YWU9 116 aa16.5■□□□□ 0.23
CNN3-202ENST00000394202 NPYP01303 97 aa16.5■□□□□ 0.23
CNN3-202ENST00000394202 RPL39LQ96EH5 51 aaKnown RBP16.5■□□□□ 0.23
CNN3-202ENST00000394202 NRACQ8N912 160 aa16.49■□□□□ 0.23
CNN3-202ENST00000394202 P0DMU3 169 aa16.49■□□□□ 0.23
CNN3-202ENST00000394202 FAM231AP0DMU4 169 aa16.49■□□□□ 0.23
CNN3-202ENST00000394202 FAM231CP0DMU5 169 aa16.49■□□□□ 0.23
CNN3-202ENST00000394202 MRAP2Q96G30 205 aa16.49■□□□□ 0.23
CNN3-202ENST00000394202 M0QY20 66 aa16.48■□□□□ 0.23
CNN3-202ENST00000394202 SPART-AS1P0CW21 52 aa16.48■□□□□ 0.23
CNN3-202ENST00000394202 ZFP2Q6ZN57 461 aa16.48■□□□□ 0.23
CNN3-202ENST00000394202 C18orf32Q8TCD1 76 aa16.48■□□□□ 0.23
CNN3-202ENST00000394202 PPBPP02775 128 aa16.47■□□□□ 0.23
CNN3-202ENST00000394202 LBHQ53QV2 105 aaPredicted RBP16.47■□□□□ 0.23
CNN3-202ENST00000394202 C11orf68Q9H3H3 251 aaKnown RBP16.47■□□□□ 0.23
CNN3-202ENST00000394202 RHODO00212 210 aa16.47■□□□□ 0.23
CNN3-202ENST00000394202 TNFRSF6BO95407 300 aa16.47■□□□□ 0.23
CNN3-202ENST00000394202 C18orf15Q96N68 181 aa16.47■□□□□ 0.23
CNN3-202ENST00000394202 DAD1P61803 113 aa16.46■□□□□ 0.22
CNN3-202ENST00000394202 ZMAT4Q9H898 229 aa16.46■□□□□ 0.22
CNN3-202ENST00000394202 STAB2Q8WWQ8 2551 aa16.45■□□□□ 0.22
CNN3-202ENST00000394202 FHL2Q14192 279 aa16.45■□□□□ 0.22
CNN3-202ENST00000394202 LOC389332A0A1B0GUA5 103 aa16.44■□□□□ 0.22
CNN3-202ENST00000394202 C12orf74Q32Q52 190 aa16.44■□□□□ 0.22
CNN3-202ENST00000394202 SLC25A29Q8N8R3 303 aa16.42■□□□□ 0.22
CNN3-202ENST00000394202 TEX43Q6ZNM6 134 aa16.42■□□□□ 0.22
CNN3-202ENST00000394202 FBN3Q75N90 2809 aa16.41■□□□□ 0.22
CNN3-202ENST00000394202 TRGV4A0A0C4DH28 118 aa16.41■□□□□ 0.22
CNN3-202ENST00000394202 URB1-AS1Q96HZ7 61 aa16.41■□□□□ 0.22
CNN3-202ENST00000394202 C2orf88Q9BSF0 95 aa16.4■□□□□ 0.22
CNN3-202ENST00000394202 IFI27P40305 119 aaPredicted RBP16.4■□□□□ 0.22
CNN3-202ENST00000394202 LINC00469Q8N7U9 141 aa16.4■□□□□ 0.22
CNN3-202ENST00000394202 EDA2RQ9HAV5 297 aa16.4■□□□□ 0.22
CNN3-202ENST00000394202 LAMTOR2Q9Y2Q5 125 aa16.4■□□□□ 0.22
CNN3-202ENST00000394202 NANOS2P60321 138 aaKnown RBP16.38■□□□□ 0.21
CNN3-202ENST00000394202 DEFB104AQ8WTQ1 72 aa16.38■□□□□ 0.21
CNN3-202ENST00000394202 SUMO2P61956 95 aaKnown RBP16.38■□□□□ 0.21
CNN3-202ENST00000394202 NEGR1Q7Z3B1 354 aa16.38■□□□□ 0.21
CNN3-202ENST00000394202 NIT1Q86X76 327 aa16.38■□□□□ 0.21
CNN3-202ENST00000394202 NEXN-AS1Q8NBZ9 246 aa16.38■□□□□ 0.21
CNN3-202ENST00000394202 LOC100131303A0A0U1RQF7 123 aa16.37■□□□□ 0.21
CNN3-202ENST00000394202 TEX48A0A1B0GUV7 120 aa16.37■□□□□ 0.21
CNN3-202ENST00000394202 CIDEAO60543 219 aa16.37■□□□□ 0.21
CNN3-202ENST00000394202 AMTP48728 403 aa16.37■□□□□ 0.21
CNN3-202ENST00000394202 Q6ZTC4 211 aa16.37■□□□□ 0.21
CNN3-202ENST00000394202 HHLA3Q9XRX5 114 aa16.37■□□□□ 0.21
CNN3-202ENST00000394202 H7C1H1 209 aa16.37■□□□□ 0.21
CNN3-202ENST00000394202 K7EQD1 137 aa16.37■□□□□ 0.21
CNN3-202ENST00000394202 ATP5G1P05496 136 aa16.37■□□□□ 0.21
CNN3-202ENST00000394202 HTN3P15516 51 aa16.37■□□□□ 0.21
CNN3-202ENST00000394202 C11orf45Q8TAV5 145 aa16.37■□□□□ 0.21
CNN3-202ENST00000394202 MAP1LC3AQ9H492 121 aa16.37■□□□□ 0.21
CNN3-202ENST00000394202 IGLV2-18A0A075B6J9 118 aa16.35■□□□□ 0.21
CNN3-202ENST00000394202 TRBV6-5A0A0K0K1A5 114 aa16.35■□□□□ 0.21
CNN3-202ENST00000394202 TRBV6-4A0A1B0GX49 114 aa16.35■□□□□ 0.21
CNN3-202ENST00000394202 C20orf78Q9BR46 151 aa16.35■□□□□ 0.21
CNN3-202ENST00000394202 ST20Q9HBF5 79 aa16.35■□□□□ 0.21
CNN3-202ENST00000394202 SDHAF1A6NFY7 115 aa16.35■□□□□ 0.21
CNN3-202ENST00000394202 PRSS47A8MTI9 375 aa16.35■□□□□ 0.21
CNN3-202ENST00000394202 POLR2KP53803 58 aaKnown RBP16.35■□□□□ 0.21
CNN3-202ENST00000394202 PRSS3P2Q8NHM4 247 aa16.35■□□□□ 0.21
CNN3-202ENST00000394202 TMEM70Q9BUB7 260 aa16.35■□□□□ 0.21
CNN3-202ENST00000394202 F5H768 121 aa16.34■□□□□ 0.21
CNN3-202ENST00000394202 PPP1R17O96001 155 aa16.34■□□□□ 0.21
CNN3-202ENST00000394202 PMCHP20382 165 aa16.33■□□□□ 0.21
CNN3-202ENST00000394202 CRYBA4P53673 196 aa16.33■□□□□ 0.21
CNN3-202ENST00000394202 RNASEKQ6P5S7 137 aaKnown RBP16.33■□□□□ 0.21
CNN3-202ENST00000394202 VAMP8Q9BV40 100 aa16.33■□□□□ 0.21
CNN3-202ENST00000394202 SMIM2Q9BVW6 85 aa16.33■□□□□ 0.21
CNN3-202ENST00000394202 LINC00614P0C842 121 aa16.33■□□□□ 0.2
CNN3-202ENST00000394202 KRTDAPP60985 99 aa16.33■□□□□ 0.2
CNN3-202ENST00000394202 A0A1B0GV90 55 aa16.32■□□□□ 0.2
CNN3-202ENST00000394202 NHLRC4P0CG21 123 aaPredicted RBP16.32■□□□□ 0.2
CNN3-202ENST00000394202 MRPL52Q86TS9 123 aaKnown RBP16.32■□□□□ 0.2
CNN3-202ENST00000394202 ZNRF2Q8NHG8 242 aa16.32■□□□□ 0.2
CNN3-202ENST00000394202 PRO0255Q9UI72 69 aa16.32■□□□□ 0.2
CNN3-202ENST00000394202 TNFRSF18Q9Y5U5 241 aa16.32■□□□□ 0.2
CNN3-202ENST00000394202 A0A0J9YY99 117 aa16.31■□□□□ 0.2
CNN3-202ENST00000394202 Q8N976 141 aa16.31■□□□□ 0.2
CNN3-202ENST00000394202 VSIG2Q96IQ7 327 aa16.31■□□□□ 0.2
CNN3-202ENST00000394202 GAGE12JA6NER3 117 aa16.31■□□□□ 0.2
CNN3-202ENST00000394202 TCAPO15273 167 aa16.31■□□□□ 0.2
CNN3-202ENST00000394202 GAGE1Q13065 139 aa16.31■□□□□ 0.2
CNN3-202ENST00000394202 GAGE4Q13068 117 aa16.31■□□□□ 0.2
CNN3-202ENST00000394202 GAGE5Q13069 117 aa16.31■□□□□ 0.2
CNN3-202ENST00000394202 GAGE13Q4V321 117 aa16.31■□□□□ 0.2
CNN3-202ENST00000394202 Q8N8P6 123 aa16.31■□□□□ 0.2
CNN3-202ENST00000394202 TRBV10-1A0A0K0K1A3 114 aa16.3■□□□□ 0.2
CNN3-202ENST00000394202 RHOHQ15669 191 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms