RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 LAGE3Q14657 143 aa17.27■□□□□ 0.36
RARA-204ENST00000394089 DUX3Q96PT4 197 aa17.27■□□□□ 0.36
RARA-204ENST00000394089 INAFM1C9JVW0 142 aa17.26■□□□□ 0.35
RARA-204ENST00000394089 AGRNO00468 2067 aa17.26■□□□□ 0.35
RARA-204ENST00000394089 A6NJY4 79 aa17.26■□□□□ 0.35
RARA-204ENST00000394089 F8VRH5 84 aa17.26■□□□□ 0.35
RARA-204ENST00000394089 TRBV7-9A0A0J9YWB2 115 aa17.25■□□□□ 0.35
RARA-204ENST00000394089 H7C1H1 209 aa17.25■□□□□ 0.35
RARA-204ENST00000394089 LYRM7Q5U5X0 104 aa17.25■□□□□ 0.35
RARA-204ENST00000394089 RAX2Q96IS3 184 aa17.25■□□□□ 0.35
RARA-204ENST00000394089 FAM19A4Q96LR4 140 aa17.25■□□□□ 0.35
RARA-204ENST00000394089 NOTCH2Q04721 2471 aa17.25■□□□□ 0.35
RARA-204ENST00000394089 HIST2H2BDQ6DRA6 164 aa17.25■□□□□ 0.35
RARA-204ENST00000394089 TEN1Q86WV5 123 aa17.25■□□□□ 0.35
RARA-204ENST00000394089 C11orf44Q8N8P7 122 aa17.25■□□□□ 0.35
RARA-204ENST00000394089 NRACQ8N912 160 aa17.25■□□□□ 0.35
RARA-204ENST00000394089 CITED2Q99967 270 aaPredicted RBP17.25■□□□□ 0.35
RARA-204ENST00000394089 PGPEP1Q9NXJ5 209 aa17.25■□□□□ 0.35
RARA-204ENST00000394089 DEFB1P60022 68 aa17.24■□□□□ 0.35
RARA-204ENST00000394089 SNRPD3P62318 126 aaKnown RBP17.24■□□□□ 0.35
RARA-204ENST00000394089 F6UB75 175 aa17.23■□□□□ 0.35
RARA-204ENST00000394089 ORM1P02763 201 aa17.23■□□□□ 0.35
RARA-204ENST00000394089 GATA1P15976 413 aaPredicted RBP17.22■□□□□ 0.35
RARA-204ENST00000394089 PROK1P58294 105 aa17.22■□□□□ 0.35
RARA-204ENST00000394089 ZFAND2AQ8N6M9 145 aa17.22■□□□□ 0.35
RARA-204ENST00000394089 RNF183Q96D59 192 aa17.22■□□□□ 0.35
RARA-204ENST00000394089 CARD19Q96LW7 228 aa17.22■□□□□ 0.35
RARA-204ENST00000394089 CCL24O00175 119 aa17.21■□□□□ 0.35
RARA-204ENST00000394089 CUBNO60494 3623 aa17.21■□□□□ 0.35
RARA-204ENST00000394089 A0A1W2PRX2 142 aa17.21■□□□□ 0.35
RARA-204ENST00000394089 M0QXV9 152 aa17.21■□□□□ 0.35
RARA-204ENST00000394089 ZNF688P0C7X2 276 aa17.21■□□□□ 0.35
RARA-204ENST00000394089 APRG1Q8IVJ8 170 aa17.21■□□□□ 0.35
RARA-204ENST00000394089 MTORP42345 2549 aa17.21■□□□□ 0.35
RARA-204ENST00000394089 TRAV2A0A0B4J234 112 aa17.2■□□□□ 0.34
RARA-204ENST00000394089 PRR9Q5T870 116 aa17.2■□□□□ 0.34
RARA-204ENST00000394089 IGHV4-4A0A075B6R2 117 aa17.19■□□□□ 0.34
RARA-204ENST00000394089 C11orf21Q9P2W6 132 aa17.19■□□□□ 0.34
RARA-204ENST00000394089 TRBV20-1A0A075B6N2 111 aa17.18■□□□□ 0.34
RARA-204ENST00000394089 IGKV3D-20A0A0C4DH25 116 aa17.18■□□□□ 0.34
RARA-204ENST00000394089 TMEM262E9PQX1 116 aa17.18■□□□□ 0.34
RARA-204ENST00000394089 GAGE5Q13069 117 aa17.18■□□□□ 0.34
RARA-204ENST00000394089 GAGE6Q13070 117 aa17.18■□□□□ 0.34
RARA-204ENST00000394089 CD7P09564 240 aa17.17■□□□□ 0.34
RARA-204ENST00000394089 DYNLRB2Q8TF09 96 aa17.17■□□□□ 0.34
RARA-204ENST00000394089 ODF3Q96PU9 254 aa17.17■□□□□ 0.34
RARA-204ENST00000394089 TRAV21A0A0B4J279 112 aa17.16■□□□□ 0.34
RARA-204ENST00000394089 A0A0J9YX75 114 aa17.16■□□□□ 0.34
RARA-204ENST00000394089 CRLF1O75462 422 aa17.16■□□□□ 0.34
RARA-204ENST00000394089 DEFB114Q30KQ6 69 aa17.16■□□□□ 0.34
RARA-204ENST00000394089 NEXN-AS1Q8NBZ9 246 aa17.16■□□□□ 0.34
RARA-204ENST00000394089 CITED1Q99966 193 aa17.16■□□□□ 0.34
RARA-204ENST00000394089 LINC01549A6NIU2 74 aa17.16■□□□□ 0.34
RARA-204ENST00000394089 ZFAND6Q6FIF0 208 aa17.14■□□□□ 0.34
RARA-204ENST00000394089 TMEM61Q8N0U2 210 aa17.14■□□□□ 0.34
RARA-204ENST00000394089 TOMM6Q96B49 74 aa17.14■□□□□ 0.34
RARA-204ENST00000394089 ANAPC13Q9BS18 74 aa17.14■□□□□ 0.34
RARA-204ENST00000394089 KLLNB2CW77 178 aa17.14■□□□□ 0.33
RARA-204ENST00000394089 ADARB2-AS1A8MUL3 147 aa17.13■□□□□ 0.33
RARA-204ENST00000394089 DUSP14O95147 198 aaKnown RBP17.13■□□□□ 0.33
RARA-204ENST00000394089 PSMB2P49721 201 aa17.13■□□□□ 0.33
RARA-204ENST00000394089 ORMDL2Q53FV1 153 aa17.13■□□□□ 0.33
RARA-204ENST00000394089 Q6ZQT7 251 aa17.13■□□□□ 0.33
RARA-204ENST00000394089 NF1P21359 2839 aa17.13■□□□□ 0.33
RARA-204ENST00000394089 J3KRW8 73 aa17.13■□□□□ 0.33
RARA-204ENST00000394089 SMIM2Q9BVW6 85 aa17.13■□□□□ 0.33
RARA-204ENST00000394089 RNASE4P34096 147 aaKnown RBP17.12■□□□□ 0.33
RARA-204ENST00000394089 TRAV25A0A0B4J276 109 aa17.11■□□□□ 0.33
RARA-204ENST00000394089 PRSS29PA6NIE9 313 aa17.11■□□□□ 0.33
RARA-204ENST00000394089 A8MWV9 139 aa17.11■□□□□ 0.33
RARA-204ENST00000394089 ZFP2Q6ZN57 461 aa17.11■□□□□ 0.33
RARA-204ENST00000394089 PRADC1Q9BSG0 188 aa17.11■□□□□ 0.33
RARA-204ENST00000394089 CFAP161Q6P656 301 aa17.1■□□□□ 0.33
RARA-204ENST00000394089 NDUFA11Q86Y39 141 aa17.1■□□□□ 0.33
RARA-204ENST00000394089 ASIPP42127 132 aa17.09■□□□□ 0.33
RARA-204ENST00000394089 PTH2Q96A98 100 aa17.09■□□□□ 0.33
RARA-204ENST00000394089 LINC01600Q96MT4 127 aa17.09■□□□□ 0.33
RARA-204ENST00000394089 ZNF815PA8K554 130 aa17.08■□□□□ 0.33
RARA-204ENST00000394089 RHODO00212 210 aa17.08■□□□□ 0.33
RARA-204ENST00000394089 TCL1BO95988 128 aa17.08■□□□□ 0.33
RARA-204ENST00000394089 NHLRC4P0CG21 123 aaPredicted RBP17.08■□□□□ 0.33
RARA-204ENST00000394089 KRTAP10-3P60369 221 aa17.08■□□□□ 0.33
RARA-204ENST00000394089 LOC107984156A0A0G2JMH3 177 aa17.08■□□□□ 0.32
RARA-204ENST00000394089 DEFB131AP59861 70 aa17.08■□□□□ 0.32
RARA-204ENST00000394089 ARL17AQ8IVW1 177 aa17.08■□□□□ 0.32
RARA-204ENST00000394089 SCGB3A1Q96QR1 104 aa17.08■□□□□ 0.32
RARA-204ENST00000394089 SS18L2Q9UHA2 77 aa17.08■□□□□ 0.32
RARA-204ENST00000394089 Q6Q795 121 aa17.07■□□□□ 0.32
RARA-204ENST00000394089 HIVEP1P15822 2718 aa17.07■□□□□ 0.32
RARA-204ENST00000394089 NSUN5P1Q3KNT7 163 aa17.06■□□□□ 0.32
RARA-204ENST00000394089 ANXA2RQ3ZCQ2 193 aa17.06■□□□□ 0.32
RARA-204ENST00000394089 BAALCQ8WXS3 180 aa17.06■□□□□ 0.32
RARA-204ENST00000394089 ZNF256Q9Y2P7 627 aaPredicted RBP17.06■□□□□ 0.32
RARA-204ENST00000394089 A8MTW9 85 aa17.05■□□□□ 0.32
RARA-204ENST00000394089 ANKRD29Q8N6D5 301 aa17.05■□□□□ 0.32
RARA-204ENST00000394089 RASL10AQ92737 203 aa17.05■□□□□ 0.32
RARA-204ENST00000394089 PLEKHB2Q96CS7 222 aa17.05■□□□□ 0.32
RARA-204ENST00000394089 SPANXA1Q9NS26 97 aa17.05■□□□□ 0.32
RARA-204ENST00000394089 MAP6D1Q9H9H5 199 aa17.04■□□□□ 0.32
RARA-204ENST00000394089 NSD1Q96L73 2696 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms